Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0837
         (620 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   2.1  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   3.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.3  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.3  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -3

Query: 381 NILTFLYCIV--ILIVLYCNGVFTNSILILEYC 289
           ++  F+Y +V  ILI++ C+ V +NS    E C
Sbjct: 214 HLSVFVYTLVSVILIIMGCDVVASNSRKTAEMC 246


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +3

Query: 411 ECQTIFSVLNANRIVTDYNEYPCENFSRCM 500
           +CQ  F+    +  + D    PCEN   C+
Sbjct: 55  QCQPGFTGKYCHENINDCKVNPCENGGTCV 84


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 264  LISELYLFTCNFEVY 220
            L++ +YLF C F VY
Sbjct: 1128 LLNCVYLFLCGFCVY 1142


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -3

Query: 291 CVIKLHNGKLISELYLFTCNFE 226
           C +K  NG+   E   + C F+
Sbjct: 493 CPVKRGNGRCDEECNTYACEFD 514


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,990
Number of Sequences: 336
Number of extensions: 2922
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)