Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0834
         (441 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr...    33   0.070
Z50863-6|CAA90739.1|  250|Caenorhabditis elegans Hypothetical pr...    27   4.6  
Z50858-7|CAA90725.1|  250|Caenorhabditis elegans Hypothetical pr...    27   4.6  

>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical protein
            F36H2.3 protein.
          Length = 1388

 Score = 33.5 bits (73), Expect = 0.070
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 335  ATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFH 439
            ATC G+ T V  Q +  I P + ++TYS G+ + H
Sbjct: 1175 ATCSGSSTAVGSQCIGVIVPTNAQVTYSDGSMVLH 1209


>Z50863-6|CAA90739.1|  250|Caenorhabditis elegans Hypothetical
           protein F44A6.5 protein.
          Length = 250

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 311 GTVVLAKYATCQGNFTEVAEQIL 379
           G +V AK+  CQGN T    +IL
Sbjct: 223 GAMVFAKFNRCQGNITRDVNEIL 245


>Z50858-7|CAA90725.1|  250|Caenorhabditis elegans Hypothetical
           protein F44A6.5 protein.
          Length = 250

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 311 GTVVLAKYATCQGNFTEVAEQIL 379
           G +V AK+  CQGN T    +IL
Sbjct: 223 GAMVFAKFNRCQGNITRDVNEIL 245


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,279,743
Number of Sequences: 27780
Number of extensions: 204185
Number of successful extensions: 510
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)