Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0834
         (441 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    21   6.0  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   6.0  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   6.0  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   7.9  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   7.9  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    21   7.9  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    21   7.9  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   7.9  

>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 164 SSLNKYLSKILFHYLK 211
           S L KYLSK +F  LK
Sbjct: 8   SLLKKYLSKDVFDQLK 23


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 164 SSLNKYLSKILFHYLK 211
           S L KYLSK +F  LK
Sbjct: 24  SLLKKYLSKDVFDQLK 39


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 17/34 (50%), Positives = 18/34 (52%)
 Frame = -1

Query: 117 LIFLK*IRYVYGIPIY*KYEILIPRAEFLQPGGS 16
           LI L  I   YGI    K EI   + EFL PGGS
Sbjct: 48  LIKLNNIPKSYGI----KCEIYA-KCEFLNPGGS 76


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +3

Query: 270 DYSQCLYYSVSWLEAL*SSLNMQLVRVISLKSQSRFYQ 383
           DYS   Y+  SW ++  S L       +S+K   R ++
Sbjct: 82  DYSMDCYFRQSWRDSRLSFLGPIKSLSLSIKMLERIWR 119


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -1

Query: 183 KYLFKLENNYRAMTVTENIRYKLIFLK*IRYVYGIPIY 70
           KY +   NNY      + + Y +I ++ I     +P+Y
Sbjct: 95  KYNYN-NNNYNNNNYNKKLYYNIINIEQIPVPVPVPVY 131


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -1

Query: 183 KYLFKLENNYRAMTVTENIRYKLIFLK*IRYVYGIPIY 70
           KY +   NNY      + + Y +I ++ I     +P+Y
Sbjct: 95  KYNYN-NNNYNNNNYNKKLYYNIINIEQIPVPVPVPVY 131


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 303 TILNNIGIVNNRVNDTKNTMLPNHY 229
           TI NN    NN  N+  N    N+Y
Sbjct: 322 TIHNNNNYNNNNYNNNYNNYNNNNY 346


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 243 LPNHYLHTHTFFR 205
           +PNH  H H +F+
Sbjct: 121 VPNHSSHEHPWFK 133


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,579
Number of Sequences: 438
Number of extensions: 2923
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)