Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0834
(441 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g04760.1 68414.m00472 synaptobrevin family protein similar to... 56 8e-09
At2g25340.1 68415.m03031 synaptobrevin family protein similar to... 56 1e-08
At4g32150.1 68417.m04573 synaptobrevin family protein similar to... 54 3e-08
At2g32670.1 68415.m03994 synaptobrevin family protein similar to... 54 3e-08
At5g11150.1 68418.m01303 synaptobrevin / vesicle-associated memb... 53 7e-08
At5g22360.1 68418.m02609 synaptobrevin family protein similar to... 53 1e-07
At2g33120.1 68415.m04060 synaptobrevin-related protein / vesicl... 53 1e-07
At1g04750.1 68414.m00470 synaptobrevin family protein similar to... 53 1e-07
At3g54300.1 68416.m06001 synaptobrevin family protein similar to... 51 3e-07
At2g33110.1 68415.m04059 synaptobrevin family protein similar to... 50 7e-07
At4g15780.1 68417.m02402 synaptobrevin-related family protein si... 46 9e-06
At4g27840.1 68417.m03998 expressed protein 33 0.085
At2g02620.1 68415.m00201 DC1 domain-containing protein / PHD fin... 30 0.80
At5g52990.1 68418.m06581 vesicle-associated membrane protein-rel... 29 1.8
At5g57090.1 68418.m07128 auxin transport protein (EIR1) identica... 27 7.4
At5g40990.1 68418.m04983 GDSL-motif lipase/hydrolase family prot... 26 9.8
>At1g04760.1 68414.m00472 synaptobrevin family protein similar to
Vesicle-associated membrane protein 722 (AtVAMP722)
Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis
thaliana}
Length = 220
Score = 56.4 bits (130), Expect = 8e-09
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = +2
Query: 287 ILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFH 439
+++S VARGTV+LA+Y +GNFT VA Q L K+P ++K TY+ + F+
Sbjct: 6 LIYSFVARGTVILAEYTEFKGNFTSVAAQCLQKLPSSNNKFTYNCDGHTFN 56
>At2g25340.1 68415.m03031 synaptobrevin family protein similar to
Synaptobrevin-like protein 1 (SP:P51809) [Homo sapiens]
Length = 219
Score = 56.0 bits (129), Expect = 1e-08
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = +2
Query: 281 MPILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPH-DDKLTYSHGNYLFH 439
M IL+++VARGTVVLA+ +T N + +A+QIL KIP + D ++YS Y+FH
Sbjct: 1 MSILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNGDSHVSYSQDRYVFH 54
>At4g32150.1 68417.m04573 synaptobrevin family protein similar to
Synaptobrevin-like protein 1 (SP:P51809) [Homo sapiens]
Length = 219
Score = 54.4 bits (125), Expect = 3e-08
Identities = 24/54 (44%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Frame = +2
Query: 281 MPILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIP-PHDDKLTYSHGNYLFH 439
M IL+++VARGTVVL+++ N + +A+QIL K+P +D ++YS Y+FH
Sbjct: 1 MAILYALVARGTVVLSEFTATSTNASTIAKQILEKVPGDNDSNVSYSQDRYVFH 54
>At2g32670.1 68415.m03994 synaptobrevin family protein similar to
vesicle-associated membrane protein 7 [Rattus
norvegicus] GI:9502258, SP|P51809 Synaptobrevin-like
protein 1 {Homo sapiens}; contains Pfam profile PF00957:
Synaptobrevin
Length = 285
Score = 54.4 bits (125), Expect = 3e-08
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = +2
Query: 287 ILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFH 439
+++S VARGTV+L +Y +GNFT VA Q L K+P ++K TY+ + F+
Sbjct: 71 LIYSFVARGTVILVEYTEFKGNFTAVAAQCLQKLPSSNNKFTYNCDGHTFN 121
>At5g11150.1 68418.m01303 synaptobrevin / vesicle-associated
membrane protein 713 (VAMP713) identified as AtVAMP713
by Sanderfoot, A.A., et al. in Plant Physiol. 124:
1558-69 (2000); similar to Vesicle-associated membrane
protein 722 (AtVAMP722) Synaptobrevin-related protein 1
(SP:P47192) {Arabidopsis thaliana}; synaptobrevin-like
protein Sybl1, Mus musculus, EMBL:MMU133536
Length = 221
Score = 53.2 bits (122), Expect = 7e-08
Identities = 23/55 (41%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Frame = +2
Query: 281 MPILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPH--DDKLTYSHGNYLFH 439
M I+F++VARGTVVL++++ N + +++QIL K+P + D ++YS Y+FH
Sbjct: 1 MAIIFALVARGTVVLSEFSATSTNASSISKQILEKLPGNDSDSHMSYSQDRYIFH 55
>At5g22360.1 68418.m02609 synaptobrevin family protein similar to
Synaptobrevin-like protein 1 (SP:P51809) [Homo sapiens]
Length = 221
Score = 52.8 bits (121), Expect = 1e-07
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Frame = +2
Query: 281 MPILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPH--DDKLTYSHGNYLFH 439
M I++++VARGTVVLA+++ GN V +IL K+ P D++L +S Y+FH
Sbjct: 1 MAIVYAVVARGTVVLAEFSAVTGNTGAVVRRILEKLSPEISDERLCFSQDRYIFH 55
>At2g33120.1 68415.m04060 synaptobrevin-related protein /
vesicle-associated membrane protein 722 (VAMP722) (SAR1)
identical to r to Vesicle-associated membrane protein
722 (AtVAMP722) Synaptobrevin-related protein 1
(SP:P47192) {Arabidopsis thaliana}; identical to cDNA
synaptobrevin-related protein (SAR1) GI:600709
Length = 221
Score = 52.8 bits (121), Expect = 1e-07
Identities = 21/51 (41%), Positives = 35/51 (68%)
Frame = +2
Query: 287 ILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFH 439
+++S VARGTV+L ++ +GNFT +A Q L K+P ++K TY+ + F+
Sbjct: 6 LIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFN 56
>At1g04750.1 68414.m00470 synaptobrevin family protein similar to
Vesicle-associated membrane protein 722 (AtVAMP722)
Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis
thaliana};
Length = 219
Score = 52.8 bits (121), Expect = 1e-07
Identities = 21/51 (41%), Positives = 35/51 (68%)
Frame = +2
Query: 287 ILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFH 439
+++S VARGTV+L ++ +GNFT +A Q L K+P ++K TY+ + F+
Sbjct: 6 LIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFN 56
>At3g54300.1 68416.m06001 synaptobrevin family protein similar to
vesicle-associated membrane protein 7B (At VAMP7B),
Arabidopsis thaliana, EMBL:AF025333
Length = 240
Score = 51.2 bits (117), Expect = 3e-07
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +2
Query: 287 ILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFH 439
+++S VA+GTVVLA++ GNF+ +A Q L K+P + K TYS + F+
Sbjct: 6 LIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFN 56
>At2g33110.1 68415.m04059 synaptobrevin family protein similar to
Vesicle-associated membrane protein 722 (AtVAMP722)
Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis
thaliana}
Length = 217
Score = 50.0 bits (114), Expect = 7e-07
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +2
Query: 287 ILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFH 439
+ +S +ARGTV+L ++ +GNFT VA Q L +P ++K TY+ + F+
Sbjct: 6 LFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFN 56
>At4g15780.1 68417.m02402 synaptobrevin-related family protein
similar to Vesicle-associated membrane protein 722
(AtVAMP722) Synaptobrevin-related protein 1 (SP:P47192)
{Arabidopsis thaliana}
Length = 194
Score = 46.4 bits (105), Expect = 9e-06
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +2
Query: 290 LFSIVARGTVVLAKYATCQGNFTEVAEQILSKIP-PHDDKLTYSHGNYLFH 439
++S VARGT++LA+Y GNF +A Q L K+P + K TY+ ++ F+
Sbjct: 7 IYSFVARGTMILAEYTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFN 57
>At4g27840.1 68417.m03998 expressed protein
Length = 260
Score = 33.1 bits (72), Expect = 0.085
Identities = 12/45 (26%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +2
Query: 287 ILFSIVARGTVVLAKYATC-QGNFTEVAEQILSKIPPHDDKLTYS 418
+ +S +A+GTV+LA++A+ + ++A + + +PPH ++++
Sbjct: 8 LFYSCIAKGTVILAEFASKEEPGIEDLALRCIENVPPHHSMISHT 52
>At2g02620.1 68415.m00201 DC1 domain-containing protein / PHD finger
protein-related contains Pfam profiles PF03107: DC1
domain, weak hit to PF00628: PHD-finger
Length = 513
Score = 29.9 bits (64), Expect = 0.80
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 174 INIYPKFYSIT*RRCACVNS-DLVTLCSLCRLRDYSQCLY 290
+ ++P+ S+T C VN L +CS+C +S C++
Sbjct: 102 LTLFPRQASLTCNVCGLVNKLHLTYVCSICNFAAHSDCIH 141
>At5g52990.1 68418.m06581 vesicle-associated membrane
protein-related contains weak similarity to
vesicle-associated membrane protein 722 (AtVAMP722)
(Synaptobrevin- related protein 1) (Swiss-Prot:P47192)
[Arabidopsis thaliana]
Length = 272
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 293 FSIVARGTVVLAKYATCQGNFTE-VAEQILSKIPPHDDKLTYS 418
++ +A+GTVVLA++ + Q E +A + + PPH +++
Sbjct: 10 YTCIAKGTVVLAEFVSRQEPGIEAIALRCIENTPPHHSMFSHT 52
>At5g57090.1 68418.m07128 auxin transport protein (EIR1) identical
to auxin transport protein EIR1 [Arabidopsis thaliana]
gi|3377507|gb|AAC39513; identical to root gravitropism
control protein [Arabidopsis thaliana]
gi|4322486|gb|AAD16060
Length = 647
Score = 26.6 bits (56), Expect = 7.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 326 AKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYL 433
AK A +G+ T+V+ IPPHD+ T + N +
Sbjct: 400 AKNAMTRGSSTDVSTDPKVSIPPHDNLATKAMQNLI 435
>At5g40990.1 68418.m04983 GDSL-motif lipase/hydrolase family protein
similar to lipase [Arabidopsis thaliana] GI:1145627;
contains Pfam profile PF00657: Lipase/Acylhydrolase with
GDSL-like motif
Length = 374
Score = 26.2 bits (55), Expect = 9.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 350 NFTEVAEQILSKIPPHDDKLTYSHGNYLFH 439
NF +V E + SK+ + K S YLFH
Sbjct: 142 NFKKVEEMLRSKLGDAEGKRVISRAVYLFH 171
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,416,166
Number of Sequences: 28952
Number of extensions: 177583
Number of successful extensions: 408
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 406
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 702840360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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