Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0830
(494 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52317| Best HMM Match : E-MAP-115 (HMM E-Value=1.4) 30 0.91
SB_22720| Best HMM Match : KID (HMM E-Value=0.0014) 30 1.2
SB_27139| Best HMM Match : Capsid_Iridovir (HMM E-Value=1.5) 29 2.8
SB_26846| Best HMM Match : Pox_A32 (HMM E-Value=0.0014) 29 2.8
SB_47194| Best HMM Match : CBM_19 (HMM E-Value=2) 28 3.7
SB_45296| Best HMM Match : DUF1604 (HMM E-Value=4.4) 28 3.7
SB_34742| Best HMM Match : Strep_SA_rep (HMM E-Value=5.9) 28 3.7
SB_31679| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_11449| Best HMM Match : RtcR (HMM E-Value=1.9) 28 3.7
SB_45674| Best HMM Match : Strep_SA_rep (HMM E-Value=5.9) 28 3.7
SB_15052| Best HMM Match : Pox_A32 (HMM E-Value=0.0023) 28 3.7
SB_7663| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_43631| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_27526| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-08) 28 4.9
SB_42592| Best HMM Match : DUF1640 (HMM E-Value=1.7) 27 6.4
SB_35748| Best HMM Match : Ank (HMM E-Value=0.0015) 27 6.4
SB_56701| Best HMM Match : E-MAP-115 (HMM E-Value=0.63) 27 6.4
SB_44831| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_23676| Best HMM Match : DUF904 (HMM E-Value=0.44) 27 6.4
SB_44692| Best HMM Match : Strep_SA_rep (HMM E-Value=5.9) 27 8.5
SB_42470| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_42219| Best HMM Match : DUF1604 (HMM E-Value=4.8) 27 8.5
SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 27 8.5
SB_20289| Best HMM Match : DUF1604 (HMM E-Value=3.7) 27 8.5
SB_53428| Best HMM Match : Extensin_2 (HMM E-Value=2.4) 27 8.5
SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_20219| Best HMM Match : UCH (HMM E-Value=2.7e-06) 27 8.5
>SB_52317| Best HMM Match : E-MAP-115 (HMM E-Value=1.4)
Length = 681
Score = 30.3 bits (65), Expect = 0.91
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2
Query: 166 QYNLKIRSIQNEKQINQSL*VV*NLHPD 83
+YN K+R+ QN+K+ NQ+ + HPD
Sbjct: 122 EYNNKLRADQNDKETNQAFKLYAQTHPD 149
>SB_22720| Best HMM Match : KID (HMM E-Value=0.0014)
Length = 847
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 116 VLIGGLKSTSRRNLKKRYTCTRQTGLVQTH 27
V + GLKS S+R K+RYT R ++Q H
Sbjct: 511 VCVSGLKSMSKRR-KERYTTCRAVPIIQRH 539
>SB_27139| Best HMM Match : Capsid_Iridovir (HMM E-Value=1.5)
Length = 715
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -2
Query: 166 QYNLKIRSIQNEKQINQSL*VV*NLHPD 83
QYN K+R+ +N+K+ +Q+ + HPD
Sbjct: 674 QYNNKVRADENDKETDQAFKLYAQTHPD 701
>SB_26846| Best HMM Match : Pox_A32 (HMM E-Value=0.0014)
Length = 509
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -2
Query: 172 KNQYNLKIRSIQNEKQINQSL*VV*NLHPD 83
+ +YN K+R+ QN+K+ +Q+ + HPD
Sbjct: 439 EEEYNNKLRADQNDKETDQAFKLYAQTHPD 468
>SB_47194| Best HMM Match : CBM_19 (HMM E-Value=2)
Length = 190
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -2
Query: 166 QYNLKIRSIQNEKQINQSL*VV*NLHPD 83
+YN K+R+ QN+K+ +Q+ + HPD
Sbjct: 122 EYNNKLRADQNDKETDQAFKLYAQTHPD 149
>SB_45296| Best HMM Match : DUF1604 (HMM E-Value=4.4)
Length = 296
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -2
Query: 166 QYNLKIRSIQNEKQINQSL*VV*NLHPD 83
+YN K+R+ QN+K+ +Q+ + HPD
Sbjct: 64 EYNNKLRADQNDKETDQAFKLYAQTHPD 91
>SB_34742| Best HMM Match : Strep_SA_rep (HMM E-Value=5.9)
Length = 306
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -2
Query: 166 QYNLKIRSIQNEKQINQSL*VV*NLHPD 83
+YN K+R+ QN+K+ +Q+ + HPD
Sbjct: 89 EYNNKLRADQNDKETDQAFKLYAQTHPD 116
>SB_31679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -2
Query: 166 QYNLKIRSIQNEKQINQSL*VV*NLHPD 83
+YN K+R+ QN+K+ +Q+ + HPD
Sbjct: 18 EYNNKLRADQNDKETDQAFKLYAQTHPD 45
>SB_11449| Best HMM Match : RtcR (HMM E-Value=1.9)
Length = 335
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -2
Query: 166 QYNLKIRSIQNEKQINQSL*VV*NLHPD 83
+YN K+R+ QN+K+ +Q+ + HPD
Sbjct: 18 EYNNKLRADQNDKETDQAFKLYAQTHPD 45
>SB_45674| Best HMM Match : Strep_SA_rep (HMM E-Value=5.9)
Length = 154
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -2
Query: 166 QYNLKIRSIQNEKQINQSL*VV*NLHPD 83
+YN K+R+ QN+K+ +Q+ + HPD
Sbjct: 89 EYNNKLRADQNDKETDQAFKLYAQTHPD 116
>SB_15052| Best HMM Match : Pox_A32 (HMM E-Value=0.0023)
Length = 1901
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -2
Query: 166 QYNLKIRSIQNEKQINQSL*VV*NLHPD 83
+YN K+R+ QN+K+ +Q+ + HPD
Sbjct: 1591 EYNNKLRADQNDKETDQAFKLYAQTHPD 1618
>SB_7663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 354 NGIQQ*GTTKSRFFYNTRTRFVGIHLF 274
+G GT RFFYNT ++ G+ LF
Sbjct: 76 SGFSDGGTGAFRFFYNTPKQYAGLLLF 102
>SB_43631| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1157
Score = 27.9 bits (59), Expect = 4.9
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +1
Query: 202 SIVYEGNGNLENSSEVI-QIPTIRLE*VN---TYEPCTCVIEKTRFRGSL-LLNAVLRPT 366
S+ Y NG V+ Q+ T+ LE T +PC C++ ++ +GS+ L+N P
Sbjct: 2 SVNYTINGRHHQHIVVLAQVVTVDLELSAESLTVKPCPCMLSESGLQGSISLINKRNYPA 61
Query: 367 EYS 375
E+S
Sbjct: 62 EFS 64
>SB_27526| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-08)
Length = 326
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +3
Query: 246 GHSNTYH--SIRI-SEYLRTVYVCYRKNAISWFPIV 344
G N+YH S + ++ L T+ +C+ ++ISW PI+
Sbjct: 203 GFYNSYHWPSKTVDNDILTTIIICFAFSSISWNPII 238
>SB_42592| Best HMM Match : DUF1640 (HMM E-Value=1.7)
Length = 420
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 50 AGYMCTSSSGSVWM*ISNHL*GLIYLLFILNATNF 154
+G +S+SG +WM +N G I +F+L +NF
Sbjct: 15 SGLEFSSASGFLWMTANNDWGGSILRVFLLTESNF 49
>SB_35748| Best HMM Match : Ank (HMM E-Value=0.0015)
Length = 129
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 88 DVDFKPPIRTDLFAFHFECYEFLSYIGFY*FLC 186
D+D PP+R + A H+EC L G F C
Sbjct: 30 DIDGWPPLRRAIIAEHWECAVVLIRNGAQQFYC 62
>SB_56701| Best HMM Match : E-MAP-115 (HMM E-Value=0.63)
Length = 936
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = -2
Query: 172 KNQYNLKIRSIQNEKQINQSL*VV*NLHPD 83
+ +YN K+R+ +N+K+ +Q+ + HPD
Sbjct: 571 EEEYNNKLRADENDKETDQAFKLYAQTHPD 600
>SB_44831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -2
Query: 166 QYNLKIRSIQNEKQINQSL*VV*NLHPD 83
QYN K+R+ +N+K+ +++ + HPD
Sbjct: 110 QYNNKVRADENDKETDEAFRLYSQTHPD 137
>SB_23676| Best HMM Match : DUF904 (HMM E-Value=0.44)
Length = 591
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -2
Query: 166 QYNLKIRSIQNEKQINQSL*VV*NLHPD 83
QYN K+R+ +N+K+ +++ + HPD
Sbjct: 64 QYNNKVRADENDKETDEAFRLYSQTHPD 91
>SB_44692| Best HMM Match : Strep_SA_rep (HMM E-Value=5.9)
Length = 129
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -2
Query: 166 QYNLKIRSIQNEKQINQSL*VV*NLHPD 83
+YN K+R+ QN+K+ +++ + HPD
Sbjct: 64 EYNNKLRADQNDKETDEAFKLYAQTHPD 91
>SB_42470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -2
Query: 166 QYNLKIRSIQNEKQINQSL*VV*NLHPD 83
QYN K+R+ +N+K+ +++ + HPD
Sbjct: 64 QYNDKVRADENDKETDEAFKLYAQTHPD 91
>SB_42219| Best HMM Match : DUF1604 (HMM E-Value=4.8)
Length = 356
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -2
Query: 166 QYNLKIRSIQNEKQINQSL*VV*NLHPD 83
+YN K+R+ +N+K+ +Q+ + HPD
Sbjct: 89 EYNNKLRADENDKETDQAFKLYAQTHPD 116
>SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 2629
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -2
Query: 166 QYNLKIRSIQNEKQINQSL*VV*NLHPD 83
QYN K+R+ +N+K+ +++ + HPD
Sbjct: 2496 QYNDKVRADENDKETDEAFKLYAQTHPD 2523
>SB_20289| Best HMM Match : DUF1604 (HMM E-Value=3.7)
Length = 296
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = -2
Query: 172 KNQYNLKIRSIQNEKQINQSL*VV*NLHPD 83
+ +YN K+R+ QN+++ +Q+ + HPD
Sbjct: 62 EEEYNNKLRADQNDEETDQAFKLYAQTHPD 91
>SB_53428| Best HMM Match : Extensin_2 (HMM E-Value=2.4)
Length = 448
Score = 27.1 bits (57), Expect = 8.5
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +1
Query: 1 RWRARGNFVCVCTSPVCRVHVYLFFRF 81
R+R+ C+C+ C VY+F F
Sbjct: 233 RYRSSNRLFCICSRTACSRTVYMFANF 259
>SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1480
Score = 27.1 bits (57), Expect = 8.5
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 SPVC-RVHVYLFFRFRLDVDFKPPIRTDLFAFHFECYEFLSYIGFY*FLCTFTFTSI 207
SPVC RV LF L V P+R+ +F F C +LS + +C+ FTS+
Sbjct: 911 SPVCSRVFTCLFACVHLSVRVCSPVRSRVFTCLFACV-YLS-VRVCSPVCSRAFTSL 965
>SB_20219| Best HMM Match : UCH (HMM E-Value=2.7e-06)
Length = 543
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -3
Query: 84 TEPEEEVHMYPANRTRTDTHEVSSCPPP 1
T+ EEE+H+ P++ T T + +V +C P
Sbjct: 168 TQEEEEIHLRPSS-TGTSSDDVVNCSDP 194
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,135,589
Number of Sequences: 59808
Number of extensions: 328325
Number of successful extensions: 677
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1062812967
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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