Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0830
         (494 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.       25   1.4  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    24   2.5  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   4.3  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   7.6  

>DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.
          Length = 409

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 356 LGLQNIHSP*IFGFSVLIDSCL*NLLL 436
           LGLQN+  P +  F+ L DS   NL L
Sbjct: 279 LGLQNLFEPNVANFNGLQDSSTSNLYL 305


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 63   VPLLQVPSGCRFQTTY 110
            VP++Q PSGC   T Y
Sbjct: 1168 VPVIQKPSGCSMITEY 1183


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 42  SCLPGTCVPLLQVPS 86
           +C+ GTC+ +LQ PS
Sbjct: 513 ACVLGTCLIILQAPS 527


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 113 LIGGLKSTSRRNLKKRYTCTRQTGLVQTHTK 21
           L GG  +TSR  L+ +   +  + L+Q H K
Sbjct: 665 LTGGYFNTSRSRLEMQKKRSEYSQLIQEHEK 695


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,911
Number of Sequences: 2352
Number of extensions: 11269
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43977336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)