Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0830
         (494 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   7.2  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   7.2  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.5  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.5  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   9.5  

>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 98  KSTSRRNLKKRYTCTRQ 48
           K    R  +KRY+C+R+
Sbjct: 261 KLLEERTSRKRYSCSRE 277


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -3

Query: 357 KNGIQQ*GTTKSRFFYNTRTRFVG 286
           K  IQ  G T+  FF      FVG
Sbjct: 52  KKAIQVLGVTEKEFFDQMGVHFVG 75


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 302 VHGS*VFTYSNRMVG 258
           + GS  FTYS +M+G
Sbjct: 587 IGGSEPFTYSEKMLG 601


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 302 VHGS*VFTYSNRMVG 258
           + GS  FTYS +M+G
Sbjct: 587 IGGSEPFTYSEKMLG 601


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 181 EINKNQYNLKIRSIQNEKQ 125
           E+NK  +N+KI ++  +KQ
Sbjct: 362 EMNKWWWNMKISNLSFDKQ 380


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,315
Number of Sequences: 438
Number of extensions: 3588
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)