Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0829
         (639 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M64231-1|AAA60574.1|  302|Homo sapiens spermidine synthase protein.   116   5e-26
M34338-1|AAA36633.1|  302|Homo sapiens spermidine synthase protein.   116   5e-26
BC033106-1|AAH33106.1|  302|Homo sapiens spermidine synthase pro...   116   5e-26
BC000309-1|AAH00309.1|  302|Homo sapiens spermidine synthase pro...   116   5e-26
AL109811-6|CAI22104.1|  302|Homo sapiens spermidine synthase pro...   116   5e-26
AB209417-1|BAD92654.1|  503|Homo sapiens zinc finger protein 519...    33   1.1  
BC024227-1|AAH24227.1|  540|Homo sapiens zinc finger protein 519...    32   1.5  

>M64231-1|AAA60574.1|  302|Homo sapiens spermidine synthase protein.
          Length = 302

 Score =  116 bits (280), Expect = 5e-26
 Identities = 47/85 (55%), Positives = 65/85 (76%)
 Frame = +3

Query: 384 LKTNWFTESCDMWPGGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQCTQKD 563
           ++  WF E+C +WPG   S +V+++LH  +S+YQ+I VF + + G VLVLDG+IQCT++D
Sbjct: 16  IREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERD 75

Query: 564 EFSYQEMISFLPLCCHKNPENVLIV 638
           EFSYQEMI+ LPLC H NP  VLI+
Sbjct: 76  EFSYQEMIANLPLCSHPNPRKVLII 100


>M34338-1|AAA36633.1|  302|Homo sapiens spermidine synthase protein.
          Length = 302

 Score =  116 bits (280), Expect = 5e-26
 Identities = 47/85 (55%), Positives = 65/85 (76%)
 Frame = +3

Query: 384 LKTNWFTESCDMWPGGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQCTQKD 563
           ++  WF E+C +WPG   S +V+++LH  +S+YQ+I VF + + G VLVLDG+IQCT++D
Sbjct: 16  IREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERD 75

Query: 564 EFSYQEMISFLPLCCHKNPENVLIV 638
           EFSYQEMI+ LPLC H NP  VLI+
Sbjct: 76  EFSYQEMIANLPLCSHPNPRKVLII 100


>BC033106-1|AAH33106.1|  302|Homo sapiens spermidine synthase
           protein.
          Length = 302

 Score =  116 bits (280), Expect = 5e-26
 Identities = 47/85 (55%), Positives = 65/85 (76%)
 Frame = +3

Query: 384 LKTNWFTESCDMWPGGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQCTQKD 563
           ++  WF E+C +WPG   S +V+++LH  +S+YQ+I VF + + G VLVLDG+IQCT++D
Sbjct: 16  IREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERD 75

Query: 564 EFSYQEMISFLPLCCHKNPENVLIV 638
           EFSYQEMI+ LPLC H NP  VLI+
Sbjct: 76  EFSYQEMIANLPLCSHPNPRKVLII 100


>BC000309-1|AAH00309.1|  302|Homo sapiens spermidine synthase
           protein.
          Length = 302

 Score =  116 bits (280), Expect = 5e-26
 Identities = 47/85 (55%), Positives = 65/85 (76%)
 Frame = +3

Query: 384 LKTNWFTESCDMWPGGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQCTQKD 563
           ++  WF E+C +WPG   S +V+++LH  +S+YQ+I VF + + G VLVLDG+IQCT++D
Sbjct: 16  IREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERD 75

Query: 564 EFSYQEMISFLPLCCHKNPENVLIV 638
           EFSYQEMI+ LPLC H NP  VLI+
Sbjct: 76  EFSYQEMIANLPLCSHPNPRKVLII 100


>AL109811-6|CAI22104.1|  302|Homo sapiens spermidine synthase
           protein.
          Length = 302

 Score =  116 bits (280), Expect = 5e-26
 Identities = 47/85 (55%), Positives = 65/85 (76%)
 Frame = +3

Query: 384 LKTNWFTESCDMWPGGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQCTQKD 563
           ++  WF E+C +WPG   S +V+++LH  +S+YQ+I VF + + G VLVLDG+IQCT++D
Sbjct: 16  IREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERD 75

Query: 564 EFSYQEMISFLPLCCHKNPENVLIV 638
           EFSYQEMI+ LPLC H NP  VLI+
Sbjct: 76  EFSYQEMIANLPLCSHPNPRKVLII 100


>AB209417-1|BAD92654.1|  503|Homo sapiens zinc finger protein 519
           variant protein.
          Length = 503

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 271 CIPCSKYKNSFRPSYELNITELTFHNHDIYVQRYDSIH 158
           CIP +KY++ F  S   N  ++ F NHD  + ++ S H
Sbjct: 102 CIPMNKYQHKFLKSVFCNKNQINF-NHDSNISKHHSTH 138


>BC024227-1|AAH24227.1|  540|Homo sapiens zinc finger protein 519
           protein.
          Length = 540

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 271 CIPCSKYKNSFRPSYELNITELTFHNHDIYVQRYDSIH 158
           CIP +KY++ F  S   N  ++ F NHD  + ++ S H
Sbjct: 139 CIPMNKYQHKFLKSVFCNKNQINF-NHDSDISKHHSTH 175


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,431,092
Number of Sequences: 237096
Number of extensions: 1900461
Number of successful extensions: 3334
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3334
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)