Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0829
         (639 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   1.9  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   2.5  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   7.6  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -1

Query: 240 FALLTNSTLLNSHFTITIYMSKDMIRYI*QTETLDNDLL 124
           +A+  N T +NS   I++  SK  I+   QTE  ++  L
Sbjct: 541 YAMKMNETYINSGNKISLATSKSFIKANSQTEVSNSKKL 579


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 534 PRQEPSPNWLYQKLGYSGILI 472
           P+  P PNW   K G  G  I
Sbjct: 107 PKLTPYPNWAQNKAGACGSAI 127


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 236 PFLRTQHY*THISQSRYIC 180
           P   T+HY TH  +  Y C
Sbjct: 104 PARLTRHYRTHTGEKPYQC 122


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,481
Number of Sequences: 438
Number of extensions: 3820
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)