Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0824
         (590 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    28   0.89 
SPBC609.02 |ptn1||phosphatidylinositol-3,4,5-trisphosphate3-phos...    28   1.2  
SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit |...    27   1.5  
SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein ...    27   2.7  
SPAC2G11.13 |atg22||autophagy associated protein Atg22 |Schizosa...    27   2.7  
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|...    26   3.6  
SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyce...    26   3.6  
SPBC18A7.02c |||seven transmembrane receptor-like protein|Schizo...    26   3.6  
SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non ca...    26   4.7  
SPCC965.05c |thp1||uracil DNA N-glycosylase Thp1 |Schizosaccharo...    26   4.7  
SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit Apc1|Sc...    25   8.3  
SPBP35G2.05c |cki2||serine/threonine protein kinase Cki2|Schizos...    25   8.3  
SPCC74.03c |ssp2|ucp9|serine/threonine protein kinase Ssp2|Schiz...    25   8.3  

>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 28.3 bits (60), Expect = 0.89
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -3

Query: 363 LPSSPSHCMKRNLRSTPTTNWSVVPSTGNMKPTLPSKL 250
           LPS PS       R TP T  +++P  G M    P K+
Sbjct: 509 LPSEPSQNQPAEYRDTPDTPRNIMPLPGLMSADQPIKV 546


>SPBC609.02 |ptn1||phosphatidylinositol-3,4,
           5-trisphosphate3-phosphatase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 348

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +3

Query: 459 LLELWVMKILQVTLRETKPLFTNWIQLKMGN*RRLSKLCHYQTA 590
           LL LW + +    L +T+PL T  +  K G  R  + +C Y  A
Sbjct: 103 LLFLWAIVMNMDALFQTQPLLTLVVHCKAGKGRTGTVICSYLVA 146


>SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 661

 Score = 27.5 bits (58), Expect = 1.5
 Identities = 18/56 (32%), Positives = 24/56 (42%)
 Frame = +2

Query: 113 IEKITEPLTLGEGPHWDERQQALYFVSIQDKTIHKYVPTTEKHTKTSLDGRVGFIL 280
           I  + E    G  P WDE+++AL F   Q     K +P T +   T    R  F L
Sbjct: 516 ISAVDESAHQGHLPGWDEKEEALIFSLAQGMNPMK-MPLTPRRASTGPRPRPTFQL 570


>SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 570

 Score = 26.6 bits (56), Expect = 2.7
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 493 TWRIFMTHSSSKQPPTRICFA 431
           T+R F T SS+K P   +CFA
Sbjct: 21  TFRKFTTESSTKSPIADVCFA 41


>SPAC2G11.13 |atg22||autophagy associated protein Atg22
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 529

 Score = 26.6 bits (56), Expect = 2.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 156 WGPSPSVRGSVIFSILTDIN 97
           W PS  + G ++F IL D+N
Sbjct: 134 WSPSSFLLGKIVFLILVDLN 153


>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
            3|||Manual
          Length = 1184

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = -3

Query: 348  SHCMKRN--LRSTPTTNWSVVPSTGNMKPTLPSKLV 247
            SH    N  + + P  N S VP+TGN+K  L    V
Sbjct: 1095 SHAAHSNNVIGTQPHVNVSAVPNTGNLKDALEGSAV 1130


>SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 2100

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 7/50 (14%)
 Frame = +2

Query: 455  LFAGTMGHEDP---PGNFERNKASLYKLDSAKDGK----LEKIIETVSLS 583
            L    +G E+P   PGNF  +  SLY++  +  G+     E+++ET++ S
Sbjct: 1517 LLRTAVGGENPMALPGNFVNSITSLYEISESFSGETKQAYEQLVETMNKS 1566


>SPBC18A7.02c |||seven transmembrane receptor-like
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 457

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 252 LVFVCFSVVGTYLCIVLSWMLTKYS 178
           ++F C  V+   L ++LSW  T+YS
Sbjct: 248 ILFACQLVLDLALLLILSWGYTRYS 272


>SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non
           catalytic subunit Arm1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 811

 Score = 25.8 bits (54), Expect = 4.7
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +3

Query: 180 YTL*ASKIKLYTNMYQLLKNI 242
           Y + A+K K +T  YQLLKNI
Sbjct: 717 YHVSATKKKEFTRQYQLLKNI 737


>SPCC965.05c |thp1||uracil DNA N-glycosylase Thp1
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 325

 Score = 25.8 bits (54), Expect = 4.7
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 494 NFERNKASLYKLDSAKDGKLEKIIETVSLSNG 589
           N E  K  + K     +G L+  +ET++L NG
Sbjct: 74  NNEYRKTDVVKNSDTDNGLLKSAVETITLENG 105


>SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit
           Apc1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1458

 Score = 25.0 bits (52), Expect = 8.3
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +2

Query: 176 ALYFVSIQDKTIHKYVPTTEKHTKTSLDGRVGFILPVEGTTDQFVV 313
           A+   +I+ K + K V  + K  K SL+  +   LP+EGT   F V
Sbjct: 295 AINLSAIKSKHLQKIVVLSSKG-KVSLESPMSPSLPIEGTFRSFRV 339


>SPBP35G2.05c |cki2||serine/threonine protein kinase
           Cki2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 435

 Score = 25.0 bits (52), Expect = 8.3
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 279 YQWKVQQTNL*WESNASSFSYSGMER 356
           Y W +      WES++S FS   M+R
Sbjct: 293 YDWMLLNDGKGWESSSSHFSVVAMKR 318


>SPCC74.03c |ssp2|ucp9|serine/threonine protein kinase
           Ssp2|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 576

 Score = 25.0 bits (52), Expect = 8.3
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = +2

Query: 146 EGPHWDERQQALYFVSIQDKTIHKYVPTTEKH 241
           EGP W       Y     D  I   VPT EK+
Sbjct: 392 EGPRWTVSDPPTYAKQTIDSNICVLVPTAEKN 423


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,434,289
Number of Sequences: 5004
Number of extensions: 51409
Number of successful extensions: 148
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 256184654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)