Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0823
(582 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28682| Best HMM Match : Hydrolase (HMM E-Value=1.2e-19) 79 3e-15
SB_18334| Best HMM Match : CSE2 (HMM E-Value=4.9) 33 0.22
SB_18016| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_1419| Best HMM Match : CSE2 (HMM E-Value=6.1) 31 0.52
SB_40969| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_10954| Best HMM Match : Activin_recp (HMM E-Value=0.12) 29 3.7
SB_57924| Best HMM Match : PG_binding_1 (HMM E-Value=3.5) 29 3.7
SB_45911| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_5938| Best HMM Match : Activin_recp (HMM E-Value=0.28) 29 3.7
SB_3171| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_2279| Best HMM Match : PG_binding_1 (HMM E-Value=3.5) 29 3.7
SB_36035| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_7382| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_3407| Best HMM Match : TPX2 (HMM E-Value=2.9e-09) 27 8.5
SB_366| Best HMM Match : ResIII (HMM E-Value=0.28) 27 8.5
SB_13172| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_2876| Best HMM Match : Peptidase_C2 (HMM E-Value=2.8) 27 8.5
>SB_28682| Best HMM Match : Hydrolase (HMM E-Value=1.2e-19)
Length = 219
Score = 78.6 bits (185), Expect = 3e-15
Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 2/150 (1%)
Frame = +1
Query: 139 RLVTFDATNTLLKFK-MVPSQYYTKIARTYGYRGSESDAQNKMRENFKMMWEQHPNFG-R 312
RL+T DATNTL + + V QY GY+ S ++ + R+ +KM W ++PNFG
Sbjct: 3 RLITLDATNTLFRVRGSVGYQYAKSAMEQLGYQLSAANIDKEFRKAYKMYWIKYPNFGAA 62
Query: 313 NSILWEEWWRQVVKLTLQDHLPVGADTRSLGNTLINDFKTSKCWDVAAGSDTLLQXXXXX 492
+ I ++WW +VV+ T ++ + + L N F T W+V +L
Sbjct: 63 HRITSKQWWGKVVRKTFDGNIH-SEEIEAFSVHLYNHFATGDPWEVFPEVMHVLTQLKGE 121
Query: 493 XXXXXXXSNSDPRLYDILQNLGLSKYFDFI 582
SN D RL IL +L L ++F FI
Sbjct: 122 EVTLGVISNFDERLEQILDSLKLREFFSFI 151
>SB_18334| Best HMM Match : CSE2 (HMM E-Value=4.9)
Length = 296
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 331 EWWRQVVKLTLQ--DHLPVGADTRSLGNTLINDFKTSKCWDVAAGSDTLLQ 477
EWWR + L+ + V D +SL +ND+ + CWD A TL++
Sbjct: 76 EWWRHIDNLSQRRRSSAKVSLDEQSLVE--LNDYFANLCWDTAYEQPTLVE 124
>SB_18016| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 331 EWWRQVVKLTLQ--DHLPVGADTRSLGNTLINDFKTSKCWDVAAGSDTLLQ 477
EWWR + L+ + V D +SL +ND+ + CWD A TL++
Sbjct: 110 EWWRHIDNLSQRRRSSAKVSLDEQSLVE--LNDYFANLCWDTAYEQPTLVE 158
>SB_1419| Best HMM Match : CSE2 (HMM E-Value=6.1)
Length = 270
Score = 31.5 bits (68), Expect = 0.52
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 331 EWWRQVVKLTLQ--DHLPVGADTRSLGNTLINDFKTSKCWDVAAGSDTLLQ 477
+WWR + L+ + V D +SL +ND+ + CWD A TL++
Sbjct: 50 DWWRHIDNLSQRRRSSAKVSLDEQSLVE--LNDYFANLCWDTAYEQPTLVE 98
>SB_40969| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -1
Query: 339 PPFFPEDRIPSKIRMLFPHHFKVFPHLILSITFASPVTICTCNLCV 202
PPF P R+PS+ R P + P LS + C+CNLCV
Sbjct: 260 PPFSPY-RLPSRARCSPPGYPSEEPRWRLSAV----TSFCSCNLCV 300
>SB_10954| Best HMM Match : Activin_recp (HMM E-Value=0.12)
Length = 167
Score = 28.7 bits (61), Expect = 3.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 289 EQHPNFGRNSILWEEWWRQ 345
+QHPN + SI ++ WW +
Sbjct: 94 QQHPNLDKESIAYKTWWAE 112
>SB_57924| Best HMM Match : PG_binding_1 (HMM E-Value=3.5)
Length = 581
Score = 28.7 bits (61), Expect = 3.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 289 EQHPNFGRNSILWEEWWRQ 345
+QHPN + SI ++ WW +
Sbjct: 250 QQHPNLDKESIAYKTWWAE 268
>SB_45911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 28.7 bits (61), Expect = 3.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 289 EQHPNFGRNSILWEEWWRQ 345
+QHPN + SI ++ WW +
Sbjct: 89 QQHPNLDKESIAYKTWWAE 107
>SB_5938| Best HMM Match : Activin_recp (HMM E-Value=0.28)
Length = 287
Score = 28.7 bits (61), Expect = 3.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 289 EQHPNFGRNSILWEEWWRQ 345
+QHPN + SI ++ WW +
Sbjct: 89 QQHPNLDKESIAYKTWWAE 107
>SB_3171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 851
Score = 28.7 bits (61), Expect = 3.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 289 EQHPNFGRNSILWEEWWRQ 345
+QHPN + SI ++ WW +
Sbjct: 737 QQHPNLDKESIAYKTWWAE 755
>SB_2279| Best HMM Match : PG_binding_1 (HMM E-Value=3.5)
Length = 351
Score = 28.7 bits (61), Expect = 3.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 289 EQHPNFGRNSILWEEWWRQ 345
+QHPN + SI ++ WW +
Sbjct: 20 QQHPNLDKESIAYKTWWAE 38
>SB_36035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 234
Score = 28.3 bits (60), Expect = 4.8
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 289 EQHPNFGRNSILWEEWWRQ 345
+QHPN + SI ++ WW +
Sbjct: 141 QQHPNLDKESIAFKTWWAE 159
>SB_7382| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1120
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -1
Query: 324 EDRIPSKIRMLFPHHFKVFPHLILSITFASPVTICTCNLCVILRGY 187
+DR + + PHH H++ I A T+C L +L+GY
Sbjct: 1040 DDRQKGRTKYTGPHHVLTVDHVLGMIADAEKCTVCGTQL--LLQGY 1083
>SB_3407| Best HMM Match : TPX2 (HMM E-Value=2.9e-09)
Length = 787
Score = 27.5 bits (58), Expect = 8.5
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 142 LVTFDAT-NTLLKFKMVPSQYYTKIARTYGYRGSESDAQNKMRENFKMMWEQHPNFGRNS 318
L+T +T N L + KM P T + +T+ E + NKMRE F+ +QH ++ + +
Sbjct: 275 LLTLPSTPNVLKRPKMKPK---THVEKTH--EEQELEEINKMREMFRAKMKQHDDYRKKA 329
>SB_366| Best HMM Match : ResIII (HMM E-Value=0.28)
Length = 1104
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -1
Query: 324 EDRIPSKIRMLFPHHFKVFPHLILSITFASPVTICTCNLCVILRGY 187
+DR + + PHH H+++ IT A + C ++L+GY
Sbjct: 1023 DDRQKGRTKYTGPHHVLTVDHVLVMITDAEKKCM-VCGTQLLLQGY 1067
>SB_13172| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 599
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -1
Query: 324 EDRIPSKIRMLFPHHFKVFPHLILSITFASPVTICTCNLCVILRGY 187
+DR + + PHH H+++ IT A + C ++L+GY
Sbjct: 518 DDRQKGRTKYTGPHHVLTVDHVLVMITDAEKKCM-VCGTQLLLQGY 562
>SB_2876| Best HMM Match : Peptidase_C2 (HMM E-Value=2.8)
Length = 947
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -1
Query: 324 EDRIPSKIRMLFPHHFKVFPHLILSITFASPVTICTCNLCVILRGY 187
+DR + + PHH H++ I A T+C L +L+GY
Sbjct: 867 DDRQKGRTKYTGPHHVLTVDHVLGMIADAEKCTLCGTQL--LLQGY 910
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,810,721
Number of Sequences: 59808
Number of extensions: 325141
Number of successful extensions: 676
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1397989795
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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