Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0823
(582 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92803-9|CAC35822.1| 248|Caenorhabditis elegans Hypothetical pr... 62 3e-10
Z83112-2|CAB05539.1| 391|Caenorhabditis elegans Hypothetical pr... 28 4.2
AF125964-4|ABA03109.1| 414|Caenorhabditis elegans Hypothetical ... 28 4.2
AF047655-3|ABD63244.1| 414|Caenorhabditis elegans Hypothetical ... 28 4.2
AF025465-11|AAB71024.1| 411|Caenorhabditis elegans Hypothetical... 28 4.2
AF016683-3|AAB66193.1| 497|Caenorhabditis elegans Hypothetical ... 28 4.2
AF016422-3|AAG24173.1| 411|Caenorhabditis elegans Hypothetical ... 28 4.2
AC024831-4|ABD63212.1| 355|Caenorhabditis elegans Hypothetical ... 28 4.2
Z98866-24|CAB11568.2| 366|Caenorhabditis elegans Hypothetical p... 28 5.6
AL033514-39|CAA22095.2| 401|Caenorhabditis elegans Hypothetical... 28 5.6
AF016657-2|AAB93652.1| 366|Caenorhabditis elegans Hypothetical ... 28 5.6
AC199169-13|ABO33252.1| 103|Caenorhabditis elegans Hypothetical... 27 7.4
Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z81091-5|CAB03142.1| 768|Caenorhabditis elegans Hypothetical pr... 27 9.7
U64598-7|AAK39218.3| 523|Caenorhabditis elegans Twik family of ... 27 9.7
AY255664-1|AAQ96601.1| 523|Caenorhabditis elegans two-P domain ... 27 9.7
AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical ... 27 9.7
AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical ... 27 9.7
>Z92803-9|CAC35822.1| 248|Caenorhabditis elegans Hypothetical
protein K01G5.10 protein.
Length = 248
Score = 62.1 bits (144), Expect = 3e-10
Identities = 44/150 (29%), Positives = 62/150 (41%), Gaps = 4/150 (2%)
Frame = +1
Query: 136 IRLVTFDATNTLLKFKMVPSQYYTKIARTYGYRGSESDAQNKMRENFKMMWEQHPNFGRN 315
+++++ DA +TL+ K P Y++ AR Y +N+K M P FG N
Sbjct: 19 VKVLSLDARDTLITMKESPPIVYSRFARQYDLEVDSDQIMGSFLKNYKRMSIASPCFGFN 78
Query: 316 SILWEEWWRQVVKLTLQDHLPVGADTR--SLGNTLINDFKTSKCWDVAAGSDT--LLQXX 483
I + WW +VV TL D P R + L N + T + W + SDT LQ
Sbjct: 79 GIGNKSWWIEVVSSTLLDCAPDSEKGRVEVIAGALYNHYATPEPWKLVE-SDTRQTLQKL 137
Query: 484 XXXXXXXXXXSNSDPRLYDILQNLGLSKYF 573
SN D RL +L L F
Sbjct: 138 RLKGIILVVISNFDSRLKSLLSQFNLLDLF 167
>Z83112-2|CAB05539.1| 391|Caenorhabditis elegans Hypothetical
protein K02B7.2 protein.
Length = 391
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = -1
Query: 318 RIPSKIRMLFPHHFKV-FPH 262
R+PS + MLF HH KV F H
Sbjct: 302 RLPSVVNMLFKHHIKVRFDH 321
>AF125964-4|ABA03109.1| 414|Caenorhabditis elegans Hypothetical
protein W03G1.3 protein.
Length = 414
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = -1
Query: 318 RIPSKIRMLFPHHFKV-FPH 262
R+PS + MLF HH KV F H
Sbjct: 325 RLPSVVNMLFKHHIKVRFDH 344
>AF047655-3|ABD63244.1| 414|Caenorhabditis elegans Hypothetical
protein C17B7.13 protein.
Length = 414
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = -1
Query: 318 RIPSKIRMLFPHHFKV-FPH 262
R+PS + MLF HH KV F H
Sbjct: 325 RLPSVVNMLFKHHIKVRFDH 344
>AF025465-11|AAB71024.1| 411|Caenorhabditis elegans Hypothetical
protein K02E7.2 protein.
Length = 411
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = -1
Query: 318 RIPSKIRMLFPHHFKV-FPH 262
R+PS + MLF HH KV F H
Sbjct: 322 RLPSVVNMLFKHHIKVRFDH 341
>AF016683-3|AAB66193.1| 497|Caenorhabditis elegans Hypothetical
protein K09F6.2 protein.
Length = 497
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = -1
Query: 318 RIPSKIRMLFPHHFKV-FPH 262
R+PS + MLF HH KV F H
Sbjct: 396 RLPSVVNMLFKHHIKVRFDH 415
>AF016422-3|AAG24173.1| 411|Caenorhabditis elegans Hypothetical
protein R09E12.5 protein.
Length = 411
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = -1
Query: 318 RIPSKIRMLFPHHFKV-FPH 262
R+PS + MLF HH KV F H
Sbjct: 322 RLPSVVNMLFKHHIKVRFDH 341
>AC024831-4|ABD63212.1| 355|Caenorhabditis elegans Hypothetical
protein Y55F3C.11 protein.
Length = 355
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = -1
Query: 318 RIPSKIRMLFPHHFKV-FPH 262
R+PS + MLF HH KV F H
Sbjct: 266 RLPSVVNMLFKHHIKVRFDH 285
>Z98866-24|CAB11568.2| 366|Caenorhabditis elegans Hypothetical
protein Y49E10.25 protein.
Length = 366
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 282 HFKVFPHLILSITFASPVTICTCNLCV 202
H +FP LIL I+ P T C+ C+
Sbjct: 6 HLSIFPLLILCISHVIPTTPGLCSRCI 32
>AL033514-39|CAA22095.2| 401|Caenorhabditis elegans Hypothetical
protein Y75B8A.5 protein.
Length = 401
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +1
Query: 124 CLQGIRLVTFDATNTLLKFKMVPSQYYTKIARTYGYRGSESDAQNKMRENFKMMWEQHPN 303
C + + VT + + +PS Y + + R R E ++ KM + ++ +E +PN
Sbjct: 43 CDEDKQQVTCEGQQVVTLPDRLPSGYESLVIRNSSVRTIEKNSFRKMEKLMQIEFENNPN 102
Query: 304 FG 309
G
Sbjct: 103 LG 104
>AF016657-2|AAB93652.1| 366|Caenorhabditis elegans Hypothetical
protein C16C4.6 protein.
Length = 366
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 345 LSPPFFPEDRIPSKIRMLFPHHFKVFPHLILSITFASPVTICTCNL 208
+S P FP R+PSK HF + +LS + SP ++ + N+
Sbjct: 57 MSSPSFPVLRLPSKALRATLQHFAIID--LLSFSLISPNSVRSLNI 100
>AC199169-13|ABO33252.1| 103|Caenorhabditis elegans Hypothetical
protein F38A1.13 protein.
Length = 103
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 349 VKLTLQDHLPVGADTRSLGNTLIND 423
V LT+QDHLP+ + RSL ++ ND
Sbjct: 16 VTLTIQDHLPIDS-FRSLNLSITND 39
>Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical
protein Y53C12B.3b protein.
Length = 871
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 90 NPKKD-VKSP*DVSAGYKVSHFRCDEHPIKIQNGTLAILHKDCTYIWLQGKRK 245
NPK D ++S DV++ ++ +RC+ + + + + + KD +W + +K
Sbjct: 680 NPKTDDIQSKDDVTSKSELHCYRCEHYQLPAEEVSSHNIRKDNGDLWCEHMKK 732
>Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical
protein Y53C12B.3a protein.
Length = 867
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 90 NPKKD-VKSP*DVSAGYKVSHFRCDEHPIKIQNGTLAILHKDCTYIWLQGKRK 245
NPK D ++S DV++ ++ +RC+ + + + + + KD +W + +K
Sbjct: 677 NPKTDDIQSKDDVTSKSELHCYRCEHYQLPAEEVSSHNIRKDNGDLWCEHMKK 729
>Z81091-5|CAB03142.1| 768|Caenorhabditis elegans Hypothetical
protein F55H12.1 protein.
Length = 768
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 280 MMWEQHPNFGRNSILWEEWWRQV 348
M+ +QHP++ R S W EW + +
Sbjct: 694 MLQKQHPSYDRISEQWPEWKKAI 716
>U64598-7|AAK39218.3| 523|Caenorhabditis elegans Twik family of
potassium channelsprotein 28 protein.
Length = 523
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 453 GWKRYIAANNKKEGDSYRSDFEFRPSSLRYSSK 551
G+KR + +KK YRS + R SS+ SSK
Sbjct: 233 GFKRKLRRQSKKITSQYRSQSQSRSSSVMGSSK 265
>AY255664-1|AAQ96601.1| 523|Caenorhabditis elegans two-P domain K
channel protein.
Length = 523
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 453 GWKRYIAANNKKEGDSYRSDFEFRPSSLRYSSK 551
G+KR + +KK YRS + R SS+ SSK
Sbjct: 233 GFKRKLRRQSKKITSQYRSQSQSRSSSVMGSSK 265
>AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical
protein H17B01.1b protein.
Length = 510
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 293 SILILEGILSSGKNGGDKWSS 355
S L+L G L+ +GGDKW+S
Sbjct: 384 STLLLVGALTIQNSGGDKWAS 404
>AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical
protein H17B01.1a protein.
Length = 492
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 293 SILILEGILSSGKNGGDKWSS 355
S L+L G L+ +GGDKW+S
Sbjct: 366 STLLLVGALTIQNSGGDKWAS 386
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,618,591
Number of Sequences: 27780
Number of extensions: 250180
Number of successful extensions: 586
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 586
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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