Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0820
         (539 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308...    33   0.19 
01_06_0986 - 33602714-33602741,33603037-33603146,33603401-336036...    29   2.4  
08_02_0823 + 21557111-21557292,21557391-21557473,21557722-215578...    29   3.1  
06_01_0581 - 4153668-4153883,4154070-4155104,4155718-4156292,415...    28   5.5  
10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,234...    27   7.2  
02_05_0082 + 25679089-25679253,25680998-25681030,25681758-25682579     27   9.6  

>01_01_0409 -
           3084821-3084988,3085069-3085155,3085270-3085476,
           3085904-3085985,3086085-3086275,3086410-3086616,
           3086709-3086871,3087905-3087960,3088035-3088148,
           3088599-3089807
          Length = 827

 Score = 32.7 bits (71), Expect = 0.19
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = -3

Query: 183 SHPCKEIYEPCCQIYVPVPQFVCPIIPRKNVMVIVKSFTKSKCICHATLSSFQAL 19
           + PC+E   PC ++  P     CP+    N     K+  K  C C A + +F+ +
Sbjct: 571 AEPCEECNLPCQRVREPPCSHPCPLPCHLNDCPPCKALVKRPCHCGAMVHAFECM 625


>01_06_0986 -
           33602714-33602741,33603037-33603146,33603401-33603601,
           33604605-33604697,33604937-33605182,33606007-33606372,
           33606459-33606599,33607170-33607526
          Length = 513

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +3

Query: 36  SKWHGKCIYFW*RISQLPSRFSVGLSGRRIGGQVHKFDNKVHRFLCMD 179
           ++W G C Y     ++    F  G  G   GG +H   NK H + C+D
Sbjct: 87  AEWKGACFYD----NRAWMEFHNGTDGGLGGGTLHLETNKAHSWTCID 130


>08_02_0823 +
           21557111-21557292,21557391-21557473,21557722-21557810,
           21557985-21558058,21558264-21558314,21558406-21558482,
           21560206-21560900
          Length = 416

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +1

Query: 4   RKPYDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADEL-GDRYINLTT 153
           R+ Y  SL+   SG +   +   G   +HH   W+ R   + G++Y+ L T
Sbjct: 134 REEYIGSLRRKSSGFSRGVSKYRGVARHHHNGKWEARIGRVFGNKYLYLGT 184


>06_01_0581 -
          4153668-4153883,4154070-4155104,4155718-4156292,
          4158457-4158826,4159925-4160590,4161008-4161223,
          4161725-4161793
          Length = 1048

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 21 EPESYSKWHGKCIYFW 68
          E E  SKW  +C YFW
Sbjct: 3  EVEEVSKWRRRCCYFW 18


>10_01_0217 +
           2337950-2338085,2340766-2342436,2342636-2342898,
           2343027-2343236,2343436-2343654,2344038-2345000,
           2345279-2345374,2345482-2345580,2345953-2346142,
           2346594-2346823
          Length = 1358

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +1

Query: 169 FAWMGWAYDLKTASTNIIEKRALRT-GD 249
           ++W   A+D+K   TN+  K A+R  GD
Sbjct: 914 YSWGALAFDIKVCKTNVSSKSAMRAPGD 941


>02_05_0082 + 25679089-25679253,25680998-25681030,25681758-25682579
          Length = 339

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 43  GMANAFTFGEGFHNYHHVFP 102
           G  N  T+  G+HN HH FP
Sbjct: 265 GPLNLMTWHVGYHNEHHDFP 284


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,743,684
Number of Sequences: 37544
Number of extensions: 250929
Number of successful extensions: 530
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1198356516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)