Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0820
(539 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g15850.1 68416.m02005 fatty acid desaturase family protein si... 34 0.053
At1g06090.1 68414.m00638 fatty acid desaturase family protein si... 34 0.053
At1g06360.1 68414.m00672 fatty acid desaturase family protein si... 34 0.070
At1g06350.1 68414.m00671 fatty acid desaturase family protein si... 34 0.070
At1g06120.1 68414.m00641 fatty acid desaturase family protein si... 34 0.070
At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to ... 33 0.12
At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to ... 32 0.28
At3g15870.1 68416.m02007 fatty acid desaturase family protein si... 31 0.37
At1g06100.1 68414.m00639 fatty acid desaturase family protein si... 31 0.65
At4g04930.1 68417.m00717 fatty acid desaturase family protein si... 28 4.6
At3g11397.1 68416.m01389 prenylated rab acceptor (PRA1) family p... 28 4.6
At4g16295.1 68417.m02472 self-incompatibility protein-related si... 27 6.1
At5g03460.1 68418.m00302 expressed protein 27 8.0
>At3g15850.1 68416.m02005 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 371
Score = 34.3 bits (75), Expect = 0.053
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +1
Query: 55 AFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTAS 210
A FGEG+HN HH F + R L +++T + F +G A D+K S
Sbjct: 309 ALAFGEGWHNNHHAFEFSAR-HGLEWWQLDMTWYVVKFLQAIGLATDVKLPS 359
>At1g06090.1 68414.m00638 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase GB:BAA25180
GI:2970034 (ADS1) from [Arabidopsis thaliana]
Length = 299
Score = 34.3 bits (75), Expect = 0.053
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +1
Query: 58 FTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLK 201
FT GE +HN HH F R L ++LT I FF +G A D+K
Sbjct: 239 FTMGESWHNNHHAFEASAR-HGLEWYQVDLTWYLICFFQALGLATDVK 285
>At1g06360.1 68414.m00672 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 299
Score = 33.9 bits (74), Expect = 0.070
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = +1
Query: 58 FTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRAL 237
FT GE +HN HH F R L I++T I F +G A D+K S +K AL
Sbjct: 239 FTMGESWHNNHHAFESSAR-QGLEWWQIDITWYLIRLFEVLGLATDVKLPSEIQKQKLAL 297
>At1g06350.1 68414.m00671 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 300
Score = 33.9 bits (74), Expect = 0.070
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = +1
Query: 58 FTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRAL 237
FT GE +HN HH F R L I++T I F +G A D+K S +K AL
Sbjct: 240 FTMGESWHNNHHAFESSAR-QGLEWWQIDITWYLIRLFEVLGIATDVKLPSELQKQKMAL 298
>At1g06120.1 68414.m00641 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase GB:BAA25180
GI:2970034 (ADS1) from [Arabidopsis thaliana]; supported
by cDNA:gi_12083275_gb_AF332434.1_AF332434
Length = 299
Score = 33.9 bits (74), Expect = 0.070
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +1
Query: 58 FTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLK 201
FT GE +HN HH F R L ++LT I FF +G A D+K
Sbjct: 239 FTMGESWHNNHHAFEASAR-HGLEWYQVDLTWYLIWFFQVLGLATDVK 285
>At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to
delta 9 acyl-lipid desaturase (ADS2) GI:2970036 from
[Arabidopsis thaliana]
Length = 307
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 52 NAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLK 201
+ F+FGE +HN HH F R L I+++ + FF +G A D+K
Sbjct: 245 SVFSFGESWHNNHHAFESSAR-QGLEWWQIDISWYIVRFFEIIGLATDVK 293
>At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to
delta 9 acyl-lipid desaturase (ADS1) GB:BAA25180
GI:2970034 from [Arabidopsis thaliana]
Length = 305
Score = 31.9 bits (69), Expect = 0.28
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +1
Query: 52 NAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKR 231
+ F+FGE +HN HH F R L I+++ + F +G A D+K S + +
Sbjct: 243 SVFSFGESWHNNHHAFESSAR-QGLEWWQIDISWYIVRFLEIIGLATDVKLPSESQRRRM 301
Query: 232 AL 237
A+
Sbjct: 302 AM 303
>At3g15870.1 68416.m02007 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 292
Score = 31.5 bits (68), Expect = 0.37
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +1
Query: 61 TFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRAL 237
T GEG+HN HH F + R L +++T I F +G A ++K + ++ +AL
Sbjct: 234 TLGEGWHNNHHAFEFSAR-HGLEWWQLDITWCLIRFLEAIGLATNVKLPTETQMKGKAL 291
>At1g06100.1 68414.m00639 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 299
Score = 30.7 bits (66), Expect = 0.65
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +1
Query: 61 TFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALR 240
T GE +HN HH F R L +++T I FF +G A ++K + K A+R
Sbjct: 240 TMGESWHNNHHAFETSAR-HGLEWYQLDITWYLIWFFQALGLATNVKLPTDAQKRKMAIR 298
>At4g04930.1 68417.m00717 fatty acid desaturase family protein
similar to D. melanogaster Des-1 protein, GenBank
accession number X94180; contains Pfam profile PF00487
Fatty acid desaturase domain
Length = 332
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 43 GMANAFTFGEGFHNYHHVFP 102
G N T+ G+HN HH FP
Sbjct: 259 GPLNLLTWSVGYHNEHHDFP 278
>At3g11397.1 68416.m01389 prenylated rab acceptor (PRA1) family
protein contains Pfam profile PF03208: PRA1 family
protein
Length = 209
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/52 (23%), Positives = 26/52 (50%)
Frame = +3
Query: 255 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLLK*LFLI 410
L+ +W+ +S FF+ + F F K + + + YY +Y + +F++
Sbjct: 15 LREVEWSASPRSLAEFFSRFAFPRSFSKWMSRLKCNLYYYRTNYFILFVFVL 66
>At4g16295.1 68417.m02472 self-incompatibility protein-related
similar to self-incompatibility [Papaver nudicaule]
GI:3097262
Length = 151
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +1
Query: 52 NAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTN 216
N F++ G + H F W Y + G +N+ + F GW + TA T+
Sbjct: 75 NRFSWNFGENMLHSTFFWCYMNKDNGHMNVNVFWDDVILFHRCGWKNCIWTAKTD 129
>At5g03460.1 68418.m00302 expressed protein
Length = 89
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 5/23 (21%)
Frame = +1
Query: 139 INLTTRFIDFF-----AWMGWAY 192
INL R ID+F AW+GW Y
Sbjct: 16 INLMPRIIDYFMAKLYAWLGWEY 38
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,808,454
Number of Sequences: 28952
Number of extensions: 218708
Number of successful extensions: 527
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1003808112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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