Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0818
         (501 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g27870.1 68414.m03415 hypothetical protein                          29   2.3  
At1g59865.1 68414.m06743 expressed protein                             27   5.4  

>At1g27870.1 68414.m03415 hypothetical protein
          Length = 213

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -3

Query: 292 LFDVSVNASRFLFFNDGWRPD-HW*LRRFAIFYDKIIRVH*ETIID 158
           LFD+ +N S+  F    W  D HW LR+F   +   IR H  T  D
Sbjct: 134 LFDL-INGSKVYFGVHNWIRDIHWWLRKFESIHFNWIRRHHNTPAD 178


>At1g59865.1 68414.m06743 expressed protein
          Length = 175

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = -1

Query: 150 TFFSVNYRRTINTNSTLIYMTKNFS*TNSMNFFYHEVLFSRPLPRAEFLQ 1
           TFF+  +   ++ + TL Y +  FS ++S++ F+     S   P  +F Q
Sbjct: 56  TFFASTFMLPVSASPTLSYKSSLFS-SSSLSVFFIHASSSSHFPEVDFQQ 104


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,435,773
Number of Sequences: 28952
Number of extensions: 163763
Number of successful extensions: 316
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 316
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 888318720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)