Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0816
(563 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 192 5e-48
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 187 1e-46
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 170 2e-41
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 161 1e-38
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 156 3e-37
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 156 3e-37
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 156 4e-37
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 154 2e-36
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 152 6e-36
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 149 3e-35
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 138 6e-32
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 137 1e-31
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 137 1e-31
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 137 1e-31
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 134 2e-30
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 132 5e-30
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 132 5e-30
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 129 5e-29
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 128 7e-29
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 124 1e-27
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 124 2e-27
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 120 2e-26
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 118 1e-25
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 113 2e-24
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 113 2e-24
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 113 2e-24
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 113 2e-24
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 109 6e-23
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 109 6e-23
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 101 9e-21
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 99 6e-20
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 98 1e-19
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 95 1e-18
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 93 3e-18
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 87 4e-16
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 85 1e-15
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 80 3e-14
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 79 7e-14
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 77 4e-13
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 74 2e-12
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 71 2e-11
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 71 2e-11
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 70 4e-11
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 65 1e-09
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 64 2e-09
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 63 4e-09
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 62 7e-09
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 62 7e-09
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 60 3e-08
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 60 4e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 6e-08
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 59 6e-08
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 59 8e-08
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 58 1e-07
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 58 1e-07
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 57 2e-07
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 57 2e-07
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 56 4e-07
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 56 8e-07
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 55 1e-06
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 54 2e-06
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 54 3e-06
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 53 4e-06
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 53 4e-06
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 52 7e-06
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 51 2e-05
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 51 2e-05
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 49 7e-05
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 48 2e-04
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 48 2e-04
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 47 3e-04
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 47 3e-04
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 46 5e-04
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 45 0.001
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 45 0.001
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 44 0.002
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 44 0.002
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 44 0.003
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 43 0.004
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 43 0.004
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 42 0.008
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 42 0.013
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 40 0.030
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 40 0.053
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 39 0.070
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 38 0.12
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 38 0.12
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 38 0.16
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 37 0.37
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 37 0.37
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 34 2.0
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 33 3.5
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 33 4.6
UniRef50_Q8ID15 Cluster: Putative uncharacterized protein MAL13P... 32 8.1
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 192 bits (468), Expect = 5e-48
Identities = 106/169 (62%), Positives = 111/169 (65%)
Frame = +3
Query: 57 TSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 236
TSL LLIRAELG PGSLIGDDQIYNTIVTAHA N LVPL+LGAP
Sbjct: 28 TSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAP 87
Query: 237 DIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSL 416
D+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSL
Sbjct: 88 DMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSL 147
Query: 417 HLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
HLAGISS SFDQ+PLFV AVGITAFLLLLSL
Sbjct: 148 HLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAFLLLLSL 196
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 187 bits (456), Expect = 1e-46
Identities = 102/169 (60%), Positives = 109/169 (64%)
Frame = +3
Query: 57 TSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 236
TSL LLIR ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAP
Sbjct: 4 TSLSLLIRTELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAP 63
Query: 237 DIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSL 416
D+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSL
Sbjct: 64 DMAFPRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSL 123
Query: 417 HLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
HLAGISS SFDQ+PLF+ AVGITA LLLLSL
Sbjct: 124 HLAGISSILGAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSL 172
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 170 bits (413), Expect = 2e-41
Identities = 96/180 (53%), Positives = 113/180 (62%)
Frame = -2
Query: 562 SDNNNKNAVIPTAHTNKGN*SNDILFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLP 383
S++N+K AV T TN G S I +R I+E PAKC+EKI STD P
Sbjct: 36 SESNSKMAVSNTDQTNSGMRSMVIPADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAP 95
Query: 382 LCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLILFIRGNAISGAPSIRGTNQF 203
CAI SGG TVHPVP P STI L + ++EGG +QNL+LFIRGNA+SGAP++ GTNQF
Sbjct: 96 ACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQF 155
Query: 202 PNPPXXXXXXXXXXXXKACAVTIVL*I*SSPINDPGFPNSARIKSLKDVPXIPDQIPKIK 23
PNPP KA AVT+ L I S PI PG PNSARIKSL DVP +P PK+K
Sbjct: 156 PNPPIMIGMTMKKIITKAWAVTMTL-IWSFPIKLPGCPNSARIKSLSDVPTMPAHAPKMK 214
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 161 bits (391), Expect = 1e-38
Identities = 92/169 (54%), Positives = 103/169 (60%)
Frame = +3
Query: 57 TSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 236
T+L LLIRAELG PG+L+GDDQIYN IVTAHA N LVPL++GAP
Sbjct: 32 TALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAP 91
Query: 237 DIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSL 416
D+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSL
Sbjct: 92 DMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSL 151
Query: 417 HLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
HLAGISS S Q PLFV +V ITA LLLLSL
Sbjct: 152 HLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSVLITAVLLLLSL 200
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 156 bits (379), Expect = 3e-37
Identities = 88/169 (52%), Positives = 100/169 (59%)
Frame = +3
Query: 57 TSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 236
T+L LLIRAEL PG+L+GDDQIYN IVTAHA N L+PL++GAP
Sbjct: 20 TALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAP 79
Query: 237 DIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSL 416
D+AFPR+NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSL
Sbjct: 80 DMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSL 139
Query: 417 HLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
HLAGISS S Q PLFV AV ITA LLLLSL
Sbjct: 140 HLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLITAVLLLLSL 188
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 156 bits (379), Expect = 3e-37
Identities = 88/169 (52%), Positives = 100/169 (59%)
Frame = +3
Query: 57 TSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 236
T+L LLIRAEL PG+L+GDDQIYN IVTAHA N LVPL++GAP
Sbjct: 31 TALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAP 90
Query: 237 DIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSL 416
D+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSL
Sbjct: 91 DMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSL 150
Query: 417 HLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
HLAG+SS S Q PLFV AV +TA LLLLSL
Sbjct: 151 HLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAVLVTAVLLLLSL 199
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 156 bits (378), Expect = 4e-37
Identities = 86/169 (50%), Positives = 99/169 (58%)
Frame = +3
Query: 57 TSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 236
T+L LLIR ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAP
Sbjct: 14 TALSLLIRVELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAP 73
Query: 237 DIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSL 416
D+AFPR+NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSL
Sbjct: 74 DMAFPRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSL 133
Query: 417 HLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
HLAG+SS + + LFV +V ITA LLLLSL
Sbjct: 134 HLAGVSSILGAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSL 182
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 154 bits (373), Expect = 2e-36
Identities = 86/169 (50%), Positives = 100/169 (59%)
Frame = +3
Query: 57 TSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 236
T+L LLIRAEL PG+L+GDDQIYN IVTAHA N LVPL++GAP
Sbjct: 31 TALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMIGAP 90
Query: 237 DIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSL 416
D+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSL
Sbjct: 91 DMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSL 150
Query: 417 HLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
HLAG+SS + Q PLFV +V +TA LLLLSL
Sbjct: 151 HLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLVTAVLLLLSL 199
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 152 bits (368), Expect = 6e-36
Identities = 85/169 (50%), Positives = 100/169 (59%)
Frame = +3
Query: 57 TSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 236
T+L LLIRAELG PG+L+G+D IYN IVTAHA N LVPL++GAP
Sbjct: 31 TALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAP 90
Query: 237 DIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSL 416
D+AFPR+NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSL
Sbjct: 91 DMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSL 150
Query: 417 HLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
HLAG+SS + Q PLFV +V ITA LLLLSL
Sbjct: 151 HLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSL 199
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 149 bits (362), Expect = 3e-35
Identities = 81/169 (47%), Positives = 99/169 (58%)
Frame = +3
Query: 57 TSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 236
T+ +LIR EL +PGS++GDD +YN IVTAHA N VPL++GAP
Sbjct: 32 TAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAP 91
Query: 237 DIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSL 416
D+AFPR+NNI F +VE GAGTG TVYPPL+S AH G SVD+AIFSL
Sbjct: 92 DMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSL 151
Query: 417 HLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
HLAG+SS + ++PLFV +V ITA LLLLSL
Sbjct: 152 HLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAILLLLSL 200
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 138 bits (335), Expect = 6e-32
Identities = 77/168 (45%), Positives = 95/168 (56%)
Frame = +3
Query: 60 SLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPD 239
S+ L+IR ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD
Sbjct: 16 SMSLIIRLELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPD 75
Query: 240 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 419
++FPR+NN+ F + G GTG TVYPPLS + H G SVDL IFSLH
Sbjct: 76 MSFPRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLH 135
Query: 420 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
LAG SS + D++ LF +V ITA LLLLSL
Sbjct: 136 LAGASSIMGAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSL 183
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 137 bits (332), Expect = 1e-31
Identities = 80/171 (46%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Frame = +3
Query: 57 TSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 230
T+ +LIR EL PG L GD Q+YN I+TAHA N LVP+++G
Sbjct: 29 TAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIG 88
Query: 231 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 410
APD+AFPR+NNI F VE GAGTG TVYPPLS +H G SVDLAIF
Sbjct: 89 APDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIF 148
Query: 411 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
SLHL+GISS + +LPLFV A+ +TA LLLLSL
Sbjct: 149 SLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSL 199
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 137 bits (332), Expect = 1e-31
Identities = 80/171 (46%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Frame = +3
Query: 57 TSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 230
T+ +LIR EL PG L GD Q+YN I+TAHA N LVP+++G
Sbjct: 29 TAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIG 88
Query: 231 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 410
APD+AFPR+NNI F VE GAGTG TVYPPLS +H G SVDLAIF
Sbjct: 89 APDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIF 148
Query: 411 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
SLHL+GISS + +LPLFV A+ +TA LLLLSL
Sbjct: 149 SLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSL 199
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 137 bits (332), Expect = 1e-31
Identities = 80/171 (46%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Frame = +3
Query: 57 TSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 230
T+ +LIR EL PG L GD Q+YN I+TAHA N LVP+++G
Sbjct: 29 TAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIG 88
Query: 231 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 410
APD+AFPR+NNI F VE GAGTG TVYPPLS +H G SVDLAIF
Sbjct: 89 APDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIF 148
Query: 411 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
SLHL+GISS + +LPLFV A+ +TA LLLLSL
Sbjct: 149 SLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSL 199
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 134 bits (323), Expect = 2e-30
Identities = 75/171 (43%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Frame = +3
Query: 57 TSLRLLIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 230
T +LIR EL PG I G+ Q+YN ++TAHA N VP+++G
Sbjct: 32 TCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIG 91
Query: 231 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 410
APD+AFPR+NNI F +VE G+GTG TVYPPLS +H G +VDLAIF
Sbjct: 92 APDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIF 151
Query: 411 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
SLHL+G+SS + +LPLFV +V +TAFLLLLSL
Sbjct: 152 SLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSL 202
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 132 bits (319), Expect = 5e-30
Identities = 78/171 (45%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Frame = +3
Query: 57 TSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 230
T++ L+IR EL PGS L G+ Q++N +V HA N L+PL++G
Sbjct: 30 TAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIG 89
Query: 231 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 410
A D AFPRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF
Sbjct: 90 ATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIF 149
Query: 411 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
+LHL ISS + +LPLFV ++ ITAFLLLLSL
Sbjct: 150 ALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSL 200
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 132 bits (319), Expect = 5e-30
Identities = 78/171 (45%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Frame = +3
Query: 57 TSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 230
T++ L+IR EL PGS L G+ Q++N +V HA N L+PL++G
Sbjct: 30 TAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIG 89
Query: 231 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 410
A D AFPRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF
Sbjct: 90 ATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIF 149
Query: 411 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
+LHL ISS + +LPLFV ++ ITAFLLLLSL
Sbjct: 150 ALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSL 200
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 129 bits (311), Expect = 5e-29
Identities = 75/171 (43%), Positives = 96/171 (56%), Gaps = 2/171 (1%)
Frame = +3
Query: 57 TSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 230
+++ ++IR EL PGS L G+ Q++N +V HA N ++PL++G
Sbjct: 30 SAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIG 89
Query: 231 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 410
A D++FPRIN+I F +VE+GAGTG TVYPPLSS AH G SVDLAIF
Sbjct: 90 ATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIF 149
Query: 411 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
SLHL ISS S ++PLFV A+ ITAFLLLLSL
Sbjct: 150 SLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAFLLLLSL 200
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 128 bits (310), Expect = 7e-29
Identities = 71/169 (42%), Positives = 96/169 (56%), Gaps = 2/169 (1%)
Frame = +3
Query: 63 LRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 236
+ +LIR EL P + L+G+ QIYN ++TAHA N LVP+++G+P
Sbjct: 39 MSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPVMIGGFGNWLVPIMIGSP 98
Query: 237 DIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSL 416
D+AFPR+NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSL
Sbjct: 99 DMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSL 158
Query: 417 HLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
H++G SS S ++PLFV ++ +TAFLLLL++
Sbjct: 159 HISGASSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAFLLLLAV 207
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 124 bits (300), Expect = 1e-27
Identities = 73/171 (42%), Positives = 94/171 (54%), Gaps = 2/171 (1%)
Frame = +3
Query: 57 TSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 230
T++ L+IR EL PG L G++Q++N +V HA N ++PL++G
Sbjct: 30 TAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIG 89
Query: 231 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 410
A D AFPRINNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF
Sbjct: 90 ATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIF 149
Query: 411 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
+LH+ ISS + +LPLFV A+ ITA LLLL+L
Sbjct: 150 ALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITAVLLLLTL 200
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 124 bits (298), Expect = 2e-27
Identities = 74/170 (43%), Positives = 89/170 (52%), Gaps = 1/170 (0%)
Frame = +3
Query: 57 TSLRLLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 233
T+ +LIR EL PG I D+Q+YN+I+TAHA N L+PL LG
Sbjct: 31 TAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGG 90
Query: 234 PDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 413
PD+ FPR+NNI + +ENG GTG T+YPPLS +H G SVDLAIF
Sbjct: 91 PDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFG 150
Query: 414 LHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
LHL+GISS +L LF AV ITA LLLLSL
Sbjct: 151 LHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVVITAVLLLLSL 200
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 120 bits (289), Expect = 2e-26
Identities = 68/170 (40%), Positives = 88/170 (51%), Gaps = 1/170 (0%)
Frame = +3
Query: 57 TSLRLLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 233
T+ +LIR EL PG I D+Q+YN+I+T+H N L+P+++G
Sbjct: 57 TAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGG 116
Query: 234 PDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 413
PD+AFPR+NN+ + I+ENG GTG T+YPPLS +H VDL IF
Sbjct: 117 PDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFG 176
Query: 414 LHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
LHL+GISS +L LF AV ITA LLLLSL
Sbjct: 177 LHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWAVVITAVLLLLSL 226
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 118 bits (283), Expect = 1e-25
Identities = 72/171 (42%), Positives = 89/171 (52%), Gaps = 2/171 (1%)
Frame = +3
Query: 57 TSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 230
T L +IR EL N GS L G+ Q +N ++TAHA N L+PL+LG
Sbjct: 35 TGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLG 94
Query: 231 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 410
A D+AF R+NNI F +VE GAGTG TVY PL+ +H G +VDLAIF
Sbjct: 95 ASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIF 154
Query: 411 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
SLHL+G SS ++ +PLF AV TA LLLLSL
Sbjct: 155 SLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAVLFTAILLLLSL 205
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 113 bits (273), Expect = 2e-24
Identities = 64/170 (37%), Positives = 93/170 (54%), Gaps = 2/170 (1%)
Frame = +3
Query: 60 SLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 233
SL +L+R EL NP L+ + Q++N ++TAHA N LVPL +G+
Sbjct: 48 SLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGS 107
Query: 234 PDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 413
D AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+
Sbjct: 108 NDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFA 167
Query: 414 LHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
LHL+G+SS + +LPLFV +V ITA L++L+L
Sbjct: 168 LHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILAL 217
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 113 bits (273), Expect = 2e-24
Identities = 64/170 (37%), Positives = 93/170 (54%), Gaps = 2/170 (1%)
Frame = +3
Query: 60 SLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 233
SL +L+R EL NP L+ + Q++N ++TAHA N LVPL +G+
Sbjct: 48 SLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGS 107
Query: 234 PDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 413
D AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+
Sbjct: 108 NDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFA 167
Query: 414 LHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
LHL+G+SS + +LPLFV +V ITA L++L+L
Sbjct: 168 LHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILAL 217
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 113 bits (273), Expect = 2e-24
Identities = 64/170 (37%), Positives = 93/170 (54%), Gaps = 2/170 (1%)
Frame = +3
Query: 60 SLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 233
SL +L+R EL NP L+ + Q++N ++TAHA N LVPL +G+
Sbjct: 48 SLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGS 107
Query: 234 PDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 413
D AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+
Sbjct: 108 NDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFA 167
Query: 414 LHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
LHL+G+SS + +LPLFV +V ITA L++L+L
Sbjct: 168 LHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILAL 217
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 113 bits (273), Expect = 2e-24
Identities = 64/170 (37%), Positives = 93/170 (54%), Gaps = 2/170 (1%)
Frame = +3
Query: 60 SLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 233
SL +L+R EL NP L+ + Q++N ++TAHA N LVPL +G+
Sbjct: 48 SLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGS 107
Query: 234 PDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 413
D AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+
Sbjct: 108 NDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFA 167
Query: 414 LHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
LHL+G+SS + +LPLFV +V ITA L++L+L
Sbjct: 168 LHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILAL 217
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 109 bits (261), Expect = 6e-23
Identities = 63/169 (37%), Positives = 81/169 (47%), Gaps = 2/169 (1%)
Frame = +3
Query: 63 LRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 236
L +L+R EL PG L G+ YN I T H N VP+++GAP
Sbjct: 35 LSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAP 94
Query: 237 DIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSL 416
D++FPR+NN F E G GTG TVYPPLSS +H G SVDL IFS
Sbjct: 95 DMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSF 154
Query: 417 HLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
HL GI S LPLFV +V +T+FL+++++
Sbjct: 155 HLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSFLVIVAI 203
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 109 bits (261), Expect = 6e-23
Identities = 59/132 (44%), Positives = 77/132 (58%), Gaps = 5/132 (3%)
Frame = +3
Query: 57 TSLRLLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 233
T+ +LIR EL PG I ++Q+YN+I+TAHA N L+PL++G
Sbjct: 59 TAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPALIGGFGNFLMPLMIGG 118
Query: 234 PDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDL 401
PD+AFPR+NNI F I+E G GTG T+ YPPLS +H G SVDL
Sbjct: 119 PDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDL 178
Query: 402 AIFSLHLAGISS 437
AIF+LHL+G+SS
Sbjct: 179 AIFALHLSGVSS 190
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 101 bits (243), Expect = 9e-21
Identities = 55/103 (53%), Positives = 64/103 (62%)
Frame = +3
Query: 57 TSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 236
T+L LLIRAELG PG+L+GDDQ N IVTAHA N LVPL++GAP
Sbjct: 32 TALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAP 91
Query: 237 DIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 365
D+AFPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 92 DMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 99.1 bits (236), Expect = 6e-20
Identities = 57/127 (44%), Positives = 68/127 (53%)
Frame = +3
Query: 57 TSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 236
TSL L+IR ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAP
Sbjct: 15 TSLSLMIRTELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAP 74
Query: 237 DIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSL 416
D+AFPR+NN+ F + G + PL G SVDLAIF L
Sbjct: 75 DMAFPRMNNMSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPL 132
Query: 417 HLAGISS 437
HLAG+SS
Sbjct: 133 HLAGVSS 139
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 98.3 bits (234), Expect = 1e-19
Identities = 59/115 (51%), Positives = 66/115 (57%)
Frame = +3
Query: 219 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 398
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 399 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
LAIFSLH+AG+ S + ++PLFV AV ITA LLLLSL
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSL 118
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 95.1 bits (226), Expect = 1e-18
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Frame = +3
Query: 78 RAELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 251
+A LG L G D ++N ++T H N +PL++GAPD+AFP
Sbjct: 142 QALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFP 201
Query: 252 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 431
R+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G
Sbjct: 202 RLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGA 261
Query: 432 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
SS + ++PLF +V +TA+LLLLSL
Sbjct: 262 SSILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSL 305
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 93.5 bits (222), Expect = 3e-18
Identities = 57/151 (37%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Frame = +3
Query: 123 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 302
++N ++TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALL 152
Query: 303 XXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 470
V NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 153 LGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTI 211
Query: 471 XXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
+ ++PLFV +V +TAFLLLL+L
Sbjct: 212 LNMRAPGMTLHKMPLFVWSVLVTAFLLLLAL 242
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 86.6 bits (205), Expect = 4e-16
Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 2/169 (1%)
Frame = +3
Query: 63 LRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 236
L +LIR EL +PG G Q+YN+++T H N ++PL+LGAP
Sbjct: 42 LSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAP 101
Query: 237 DIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSL 416
++AFPR+N + F + G G+ T YPPLS S+D I L
Sbjct: 102 EMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMILGL 160
Query: 417 HLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
H GI S + DQ+ +FV +T+FLL+LS+
Sbjct: 161 HTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSFLLVLSV 209
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 85.0 bits (201), Expect = 1e-15
Identities = 53/167 (31%), Positives = 72/167 (43%), Gaps = 2/167 (1%)
Frame = +3
Query: 69 LLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 242
L IR EL G L GD Q YN ++T+H N +P++ G PD+
Sbjct: 36 LFIRLELSLIGCGILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDM 95
Query: 243 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 422
FPR+NN+ F + E G G G T+YP L H + D +F++HL
Sbjct: 96 VFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHL 155
Query: 423 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
GISS SF LF+ A ITA LL+++L
Sbjct: 156 LGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLIITL 202
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 80.2 bits (189), Expect = 3e-14
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +3
Query: 219 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 398
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 399 LAIFS 413
LAI+S
Sbjct: 61 LAIYS 65
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 79.0 bits (186), Expect = 7e-14
Identities = 47/108 (43%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Frame = +3
Query: 57 TSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 230
T+ +LIR EL PG L GD Q+YN I+TAHA N LVP+++G
Sbjct: 29 TAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIG 88
Query: 231 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 374
APD+AFPR+NNI F VE GAGTG TV LS I
Sbjct: 89 APDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 76.6 bits (180), Expect = 4e-13
Identities = 41/126 (32%), Positives = 63/126 (50%)
Frame = +3
Query: 60 SLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPD 239
SL +R EL +PG + +Y++I+T HA N +PL++ D
Sbjct: 34 SLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKIKD 93
Query: 240 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 419
++ PR+NN+ + G G G T+YPPLS++ G +DLA+FSLH
Sbjct: 94 LSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLH 153
Query: 420 LAGISS 437
+AG+SS
Sbjct: 154 MAGMSS 159
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 74.1 bits (174), Expect = 2e-12
Identities = 49/123 (39%), Positives = 57/123 (46%)
Frame = +3
Query: 69 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 248
L R L G +IG QI VTA A L PL +GAP +A
Sbjct: 25 LXXRXXLSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGAPXMAX 84
Query: 249 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
PR+ N+ F + G G VYPP SS +AH +VDL IF LHLAG
Sbjct: 85 PRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAG 144
Query: 429 ISS 437
ISS
Sbjct: 145 ISS 147
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 70.9 bits (166), Expect = 2e-11
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Frame = +3
Query: 57 TSLRLLIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 230
T +LIR EL PG+ I G+ Q+YN ++TAHA N VP+++G
Sbjct: 33 TCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIG 92
Query: 231 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 350
+PD+AFPR+NNI F +VE G G+G TV
Sbjct: 93 SPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 70.5 bits (165), Expect = 2e-11
Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 3/170 (1%)
Frame = +3
Query: 63 LRLLIRAELGNPG-SLIGDD--QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 233
+ +LIR EL G +I D +IYN + T H N L P++LG
Sbjct: 38 MSVLIRTELSMSGLKIITMDTLEIYNLLFTLHGLIMVFFNIMTGLFGGIGNYLYPVLLGY 97
Query: 234 PDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 413
D+ +PR+N +E G+GTG T+YPPLS+++++ G +D IF
Sbjct: 98 CDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFG 155
Query: 414 LHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
L AGI+S D++ ++ +T+FLLLLSL
Sbjct: 156 LLAAGIASTLSSVNFITTFTSVKTIGFVIDRISPAAWSIVLTSFLLLLSL 205
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 69.7 bits (163), Expect = 4e-11
Identities = 43/108 (39%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Frame = +3
Query: 57 TSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 230
T L +IR EL N GS L G+ Q +N ++TAHA N L+PL+LG
Sbjct: 35 TGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLG 94
Query: 231 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 374
A D+AF R+NNI F +VE GAGTG TV SS +
Sbjct: 95 ASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVKKICSSKM 142
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 64.9 bits (151), Expect = 1e-09
Identities = 35/69 (50%), Positives = 43/69 (62%)
Frame = +3
Query: 357 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 536
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 537 TAFLLLLSL 563
T LLLLSL
Sbjct: 132 TTVLLLLSL 140
Score = 35.1 bits (77), Expect = 1.1
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +2
Query: 191 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 316
W IWKL P NK YKILT PL Y K+N
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 64.5 bits (150), Expect = 2e-09
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Frame = +3
Query: 57 TSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 230
T++ ++IR EL PG+ L G+ Q++N +V HA N L+PL++G
Sbjct: 30 TAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIG 89
Query: 231 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 350
A D++F R+NNI F +VE+GAGTG TV
Sbjct: 90 ASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 63.3 bits (147), Expect = 4e-09
Identities = 48/164 (29%), Positives = 69/164 (42%)
Frame = +3
Query: 69 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 248
LLIR EL PG I D YN + T H N L+P+++GA D+AF
Sbjct: 58 LLIRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAF 117
Query: 249 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P++N + F +V+ GA TG T Y P S+ + V L F L G
Sbjct: 118 PKLNLLSF-YVYLAGAVVALFGMVQGGADTGWTFYTPYSTTTITKVVPVLLGAFIL---G 173
Query: 429 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLS 560
SS + +LPLFV ++ T+ + +L+
Sbjct: 174 FSSILTGLNFIVTTHTMRAPGMGWTRLPLFVWSIYATSVIQILA 217
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 62.5 bits (145), Expect = 7e-09
Identities = 47/164 (28%), Positives = 67/164 (40%)
Frame = +3
Query: 69 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 248
LLIR EL PG I D YN T H N ++PL+LGA D+AF
Sbjct: 65 LLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAF 124
Query: 249 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
PR+N + ++ G TG T Y P S AH +V +F + G
Sbjct: 125 PRLNLLSL-YIYLAGAVLALWGMLNGGLDTGWTFYTPYS---AHTTTTVAPVLFGAFIIG 180
Query: 429 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLS 560
SS ++ ++PLFV A+ T+ + +L+
Sbjct: 181 FSSIVTGINFIVTCHTMRAPGITWFKMPLFVWAIYATSCIQVLA 224
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 62.5 bits (145), Expect = 7e-09
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Frame = +3
Query: 63 LRLLIRAELGNPG-SLIGDDQI--YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 233
L +++R EL + +I + + YN I T H N +P++ G+
Sbjct: 35 LSVILRTELYSSSLRIIAQENVNLYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGS 94
Query: 234 PDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIF 410
P++A+PRIN+I E G GTG T+YPPLS+++ +VD+ IF
Sbjct: 95 PELAYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIF 154
Query: 411 SLHLAGISS 437
L ++G++S
Sbjct: 155 GLLVSGVAS 163
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 60.5 bits (140), Expect = 3e-08
Identities = 46/131 (35%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Frame = +3
Query: 69 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 248
+L+R EL +PG + + YN+++T+H N L+PL++GA D+AF
Sbjct: 117 VLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAF 175
Query: 249 PRINNIRF--XXXXXXXXXXXXXXIVE-NGAGTG*TVYPPLS-----SNIAHRGRSVDLA 404
PRIN I F I E A TG T+Y PLS N A+ G VDL
Sbjct: 176 PRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWTMYTPLSVGEGMGNQANAG--VDLM 233
Query: 405 IFSLHLAGISS 437
+ LHL+G+S+
Sbjct: 234 LLGLHLSGVSA 244
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 60.1 bits (139), Expect = 4e-08
Identities = 43/126 (34%), Positives = 56/126 (44%)
Frame = +3
Query: 60 SLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPD 239
S LL R +L P L D +YN VT H N L+P PD
Sbjct: 29 SFSLLFRLQLAFPSILTSD--VYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPYHCNLPD 86
Query: 240 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 419
+ FPR+N + F ++ + A G T YPPLSS SV+ ++FSLH
Sbjct: 87 LLFPRMNALSFWLMPFSLSL-----LLFSMASAGWTFYPPLSS----LSPSVEFSVFSLH 137
Query: 420 LAGISS 437
LAGI+S
Sbjct: 138 LAGIAS 143
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 6e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +3
Query: 315 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 437
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 59.3 bits (137), Expect = 6e-08
Identities = 45/166 (27%), Positives = 66/166 (39%), Gaps = 1/166 (0%)
Frame = +3
Query: 63 LRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 242
+ LLIRAEL PG ++ +N + T H N ++PL +GAPD+
Sbjct: 59 MALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDV 117
Query: 243 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGT-G*TVYPPLSSNIAHRGRSVDLAIFSLH 419
AFPR+N F + GA G T+Y PLS I G D+ I +
Sbjct: 118 AFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSDAIHSPGLGSDMWIVGVG 177
Query: 420 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLL 557
GI S + ++P+F + + + L LL
Sbjct: 178 ATGIGSVASAINMLTTILCLRAPGMTMFRMPIFTWNIFVVSVLALL 223
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 58.8 bits (136), Expect = 8e-08
Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 6/173 (3%)
Frame = +3
Query: 63 LRLLIRAELGNPGSLI----GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 230
+ +LIR EL G I + IYN +T H N L+P+++G
Sbjct: 39 ISMLIRMELNTQGLAIVRKVKEVTIYNNWITIHGLIMLFVFIMPVGIGFYGNYLIPMLIG 98
Query: 231 APDIAFPRINNIRFXXXXXXXXXXXXXXI-VENGAGTG*TVYPPLSSNIAHR-GRSVDLA 404
+++ PR+N I F + + +G T+YPPLS+ A G ++DL+
Sbjct: 99 TSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDADNIGVNIDLS 158
Query: 405 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
+ +H+ GISS +F + ++ ++ +T+ LL+ SL
Sbjct: 159 LLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNINIYNFSIIVTSILLIGSL 211
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 58.0 bits (134), Expect = 1e-07
Identities = 43/165 (26%), Positives = 66/165 (40%)
Frame = +3
Query: 69 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 248
LL+R +L P + +++N + T H N VPL++GA D+AF
Sbjct: 55 LLMRIQLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIGARDVAF 113
Query: 249 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
PR+N+ F + + G Y PLSS + VD I L + G
Sbjct: 114 PRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSSLQGVDYWIIGLLIMG 173
Query: 429 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
I S S ++PLFV + + A L++L+L
Sbjct: 174 IGSVSGAINIFATIINLRAPGMSLQRVPLFVWMMLMQAILIILAL 218
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 58.0 bits (134), Expect = 1e-07
Identities = 40/164 (24%), Positives = 64/164 (39%)
Frame = +3
Query: 69 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 248
L++RA+L P + D YN I T H N +VPL +GA D+AF
Sbjct: 76 LMMRAQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAF 134
Query: 249 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ F ++ G T Y PL+SN G + + L +AG
Sbjct: 135 PYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQIAG 194
Query: 429 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLS 560
I + + ++P+F IT +++ +
Sbjct: 195 IGTLMTGINFMVTILKMRTKGMTLMRMPMFTWTTLITMVIIVFA 238
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 57.2 bits (132), Expect = 2e-07
Identities = 45/168 (26%), Positives = 69/168 (41%), Gaps = 1/168 (0%)
Frame = +3
Query: 63 LRLLIRAELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPD 239
L LL+R +L P + IG D+ YN I T H LVPL++G
Sbjct: 50 LALLMRLQLAQPEARFIGPDR-YNQIFTMHGSNMMFLFAVPVMQAMAIY-LVPLMVGTRH 107
Query: 240 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 419
IAFPR+N + V+ G G Y PLS G+ D+ +
Sbjct: 108 IAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGKRADIWAQMIT 167
Query: 420 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
+S+ S D++PLFV ++ +T+FL++L++
Sbjct: 168 FTEVSALAIAVEIVVTVFKQRAPGMSLDRIPLFVWSMLVTSFLVILAM 215
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 57.2 bits (132), Expect = 2e-07
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 1/142 (0%)
Frame = +3
Query: 126 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 305
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVL 145
Query: 306 XXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 482
G AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 146 ASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLR 205
Query: 483 XXXXSFDQLPLFV*AVGITAFL 548
++ +LPL + + +TA L
Sbjct: 206 APGMTYMRLPLTIWGLWLTAIL 227
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 56.4 bits (130), Expect = 4e-07
Identities = 44/166 (26%), Positives = 66/166 (39%), Gaps = 1/166 (0%)
Frame = +3
Query: 60 SLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPD 239
SL LL R +L P S Y VT H N +VPL +GA D
Sbjct: 41 SLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIMLLWFASPFAFGLA-NYIVPLQIGARD 99
Query: 240 IAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSL 416
+AFPR+N + + E+GA G T+Y PL++ I G +DLA ++
Sbjct: 100 LAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYTPGIGLDLAALAI 159
Query: 417 HLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLL 554
L +S + ++P+F ++ T L+L
Sbjct: 160 FLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFTWSILFTVILML 205
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 55.6 bits (128), Expect = 8e-07
Identities = 40/125 (32%), Positives = 53/125 (42%)
Frame = +3
Query: 63 LRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 242
L LLIR L +P + +YN +VT H N +P+ L D+
Sbjct: 131 LSLLIRLNLCDPYYNLVSVDVYNYLVTNHGVAMIFFFLMPILIGGFGNYFLPIFLCLDDL 190
Query: 243 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 422
PR+N++ G G G T+YPPLS G VD +FSLHL
Sbjct: 191 LLPRLNSLSLWLMVPSIFYMELSLYY--GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHL 247
Query: 423 AGISS 437
AG+SS
Sbjct: 248 AGVSS 252
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 54.8 bits (126), Expect = 1e-06
Identities = 40/164 (24%), Positives = 63/164 (38%)
Frame = +3
Query: 69 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 248
LL+R +LG P + +YN + T H N +VPL++GA D+AF
Sbjct: 54 LLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGARDMAF 112
Query: 249 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
PR+N + V G Y PL+ VD I + L G
Sbjct: 113 PRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFAYAPLTQKQFAPTAGVDYWIVGIGLTG 172
Query: 429 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLS 560
++S + +++PLFV + AF+L+ +
Sbjct: 173 VASIAGALNFIVTILNMRAPGMTLNRMPLFVWMQLVVAFILIFA 216
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 54.0 bits (124), Expect = 2e-06
Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 3/156 (1%)
Frame = +3
Query: 63 LRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 242
L +++R EL P + + D +YN + T H N L+P ++GAPD+
Sbjct: 57 LAMIVRGELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDM 115
Query: 243 AFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS--SNIAHRGRSVDLAIFS 413
AFP++N F G A +G YPP+S + + H L I +
Sbjct: 116 AFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPLGHFINGEFLWILA 175
Query: 414 LHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 521
+ L+GISS F ++P+FV
Sbjct: 176 VALSGISSIMGAINFVTTIIRMRAPGMGFFRMPVFV 211
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 53.6 bits (123), Expect = 3e-06
Identities = 46/162 (28%), Positives = 62/162 (38%)
Frame = +3
Query: 75 IRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
+R EL P ++YN ++T H N L+PL++G D+AFPR
Sbjct: 52 MRTELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPR 110
Query: 255 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 434
+N + F V G T YPPLS G +L I SL L G S
Sbjct: 111 LNAVAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLSLLSGKWGE--ELWILSLLLVGTS 167
Query: 435 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLS 560
S +PLF A+ T+ L+LLS
Sbjct: 168 SILGAINFVTTILKMRIKDMDLHSMPLFCWAMLATSSLILLS 209
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 53.2 bits (122), Expect = 4e-06
Identities = 35/114 (30%), Positives = 49/114 (42%)
Frame = +3
Query: 96 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 275
PG + D + YN ++T H N L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 276 XXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 437
I N T T YPP S N + L +F +HL G SS
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVFVMHLLGASS 113
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 53.2 bits (122), Expect = 4e-06
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Frame = +3
Query: 69 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 248
LL+R EL + +YN ++T+H N +PL++ A D+AF
Sbjct: 91 LLMRTELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAF 149
Query: 249 PRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 422
PRIN I F ++ A T T+Y PLS ++ +VD+ + LHL
Sbjct: 150 PRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLSLQMS--SPAVDMMMLGLHL 207
Query: 423 AGISS 437
G+S+
Sbjct: 208 TGVSA 212
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 52.4 bits (120), Expect = 7e-06
Identities = 45/166 (27%), Positives = 63/166 (37%), Gaps = 1/166 (0%)
Frame = +3
Query: 69 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 248
LLIR +L P + + YN I+T H N +VPL+LGA D+A
Sbjct: 47 LLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVAL 106
Query: 249 PRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 425
PR+N + GA G T Y P S A VD + ++ L
Sbjct: 107 PRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWTFYYPFS---AQSESGVDFYLAAILLL 163
Query: 426 GISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
G SS S ++P++V +V + L L SL
Sbjct: 164 GFSSLLGNANFVATIYNLRAQGMSLWKMPIYVWSVFAASVLNLFSL 209
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 51.2 bits (117), Expect = 2e-05
Identities = 39/152 (25%), Positives = 61/152 (40%), Gaps = 4/152 (2%)
Frame = +3
Query: 120 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 299
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
Query: 300 XXXXXIVE-NGAGTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXX 467
+ +GA G T YPPLS ++ G + L + + G+SS
Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTT 205
Query: 468 XXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
+ +LPL + A+ ITA L +L
Sbjct: 206 IIQMRAPGMTMFRLPLTIWAMFITALLQAFAL 237
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 50.8 bits (116), Expect = 2e-05
Identities = 39/164 (23%), Positives = 62/164 (37%)
Frame = +3
Query: 63 LRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 242
L +LIRA+L P S + YN + T H L+P +LG+ D+
Sbjct: 50 LAMLIRAQLATPRSAFLGPEHYNQVFTMHGTIMMFLFAIPVFEGFAVY-LLPKLLGSRDL 108
Query: 243 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 422
AFPR+ F + +G +YPPLSS + G + D + +
Sbjct: 109 AFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPGINSDFWLIGITF 168
Query: 423 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLL 554
IS+ S ++P+F +TA ++L
Sbjct: 169 VEISAIAAAVEITVTVLRYRAPGMSLSKMPIFAWYALVTAVMIL 212
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 49.2 bits (112), Expect = 7e-05
Identities = 44/166 (26%), Positives = 65/166 (39%), Gaps = 1/166 (0%)
Frame = +3
Query: 63 LRLLIRAELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPD 239
+ +LIR EL G I DD +YNT + H N +PL++GA D
Sbjct: 35 MAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKD 94
Query: 240 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 419
+AFPR+N + + + T YPP S I H + FS+
Sbjct: 95 VAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIMWTGYPPYSI-ITHGNTA--FYTFSVL 151
Query: 420 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLL 557
L G +S +++L +FV A + AF+L L
Sbjct: 152 LLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFVWAT-LAAFVLQL 196
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 47.6 bits (108), Expect = 2e-04
Identities = 36/167 (21%), Positives = 64/167 (38%)
Frame = +3
Query: 63 LRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 242
L LL+R +L P + D + YN + + H ++PL+LG D+
Sbjct: 57 LALLMRLQLAVPENDFMDPETYNQVFSMHGITMMFLFAIPVMEGFAVY-IIPLMLGTRDM 115
Query: 243 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 422
FPR+N + ++ G YPPL+ G +D +
Sbjct: 116 TFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGLGLDFYTTVVTF 175
Query: 423 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
IS+ S +++P+FV AV + +F+++ +L
Sbjct: 176 MEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFAL 222
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 47.6 bits (108), Expect = 2e-04
Identities = 35/164 (21%), Positives = 62/164 (37%)
Frame = +3
Query: 69 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 248
+ IR +L P + Q YN ++T H N +VPL +GA D++F
Sbjct: 47 MFIRIQLAKPENAFLSAQAYNEVMTMHGTTMIFLAAMPLLFALM-NAVVPLQIGARDVSF 105
Query: 249 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +N + F + G T Y LS + +G +D + L ++G
Sbjct: 106 PFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTSYASLS--LHSKGHGIDFFVLGLQISG 163
Query: 429 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLS 560
+ + ++ +LPLF + + L+L +
Sbjct: 164 LGTLIAGINFLATIINMRAPGMTYMRLPLFTWTTFVASALILFA 207
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 47.2 bits (107), Expect = 3e-04
Identities = 36/164 (21%), Positives = 64/164 (39%)
Frame = +3
Query: 63 LRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 242
L +LIRA+L +P S + Y + T H L+P +LG+ D+
Sbjct: 50 LAMLIRAQLASPRSAFVGAETYAQLFTMHGTIMMFLFAIPMFEGLTIY-LLPKMLGSRDL 108
Query: 243 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 422
A+PR++ F + +G +YPPL+S + G + D + +
Sbjct: 109 AYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPPLASTLGSPGINSDFWLLGITF 168
Query: 423 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLL 554
IS+ S D++P++ +TA ++L
Sbjct: 169 VEISAIAAAVEIVVTVLRFRAPGMSLDRMPIYGWYALVTATMIL 212
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 47.2 bits (107), Expect = 3e-04
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +3
Query: 204 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAH 380
N LVP ++GAPD+ +PRIN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--IS 143
Query: 381 RGRSVDLAIFSLHLAGISS 437
+ VDL + + +AG SS
Sbjct: 144 KSIGVDLILLGIIIAGFSS 162
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 46.4 bits (105), Expect = 5e-04
Identities = 35/164 (21%), Positives = 63/164 (38%)
Frame = +3
Query: 69 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 248
LL+R +L P + + YN + T H L+PL++GA D+ F
Sbjct: 78 LLVRLQLMVPENTFLSSETYNQLFTMHGTIMMFLFAIPMLEGFAVY-LIPLMIGARDLVF 136
Query: 249 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
PR+ + + + G +Y PLS++ G S D + + LA
Sbjct: 137 PRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGLSADFWLIGITLAE 196
Query: 429 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLS 560
I+S S ++P+ + + TAF++ ++
Sbjct: 197 IASVTAAVEIIAAILCSRAPGMSLTKMPILMWYLLATAFMIAIA 240
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 44.8 bits (101), Expect = 0.001
Identities = 27/78 (34%), Positives = 39/78 (50%)
Frame = +3
Query: 204 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 383
N +VPL +GA D+AFP +N++ F V N A TG YPPL+
Sbjct: 125 NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLAELGFSP 184
Query: 384 GRSVDLAIFSLHLAGISS 437
VD I++L ++GI +
Sbjct: 185 DVGVDYYIWALQISGIGT 202
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 44.8 bits (101), Expect = 0.001
Identities = 27/78 (34%), Positives = 38/78 (48%)
Frame = +3
Query: 204 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 383
N VPL +GA D+AFP +N++ F V A TG YPPL+
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSP 183
Query: 384 GRSVDLAIFSLHLAGISS 437
G VD I++L L+G+ +
Sbjct: 184 GVGVDYYIWALQLSGLGT 201
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 44.0 bits (99), Expect = 0.002
Identities = 31/120 (25%), Positives = 49/120 (40%)
Frame = +3
Query: 204 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 383
N +VPL +GA D+AFP +N+I +V + G YPP + + +
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203
Query: 384 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
G VD I+SL LA + S +PLF TA +++ ++
Sbjct: 204 GIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTALCTAIMMIFAM 263
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 44.0 bits (99), Expect = 0.002
Identities = 44/169 (26%), Positives = 68/169 (40%), Gaps = 1/169 (0%)
Frame = +3
Query: 60 SLRLLIRAELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 236
+L LLIRAEL PG+ I D +N + T H N VP+++
Sbjct: 40 ALALLIRAELFFPGTQFIADSMTFNRMFTVHGTTLIFLFILPFASAVG-NYFVPIMVRYK 98
Query: 237 DIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSL 416
D+A+P++N I F + T PP S I+ G + D+ IF L
Sbjct: 99 DMAYPKLNAIAFWMIPPAGALVWLGFADFSWYAT-----PPYSV-ISAPGPAADMWIFGL 152
Query: 417 HLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
+ GISS S Q+PL + ++ ++L++L
Sbjct: 153 KILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSYLSSSLIVLVAL 201
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 43.6 bits (98), Expect = 0.003
Identities = 29/101 (28%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Frame = +3
Query: 63 LRLLIRAELGNPGSL-IGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPD 239
L L+R +LG PG+ D Y +T H N L+PL++GA D
Sbjct: 59 LSWLMRLQLGFPGTFSFIDANQYLQFITMHGMIMVIYLLTALFLGGFGNYLIPLMVGARD 118
Query: 240 IAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPP 359
+ FP +N + + V G G G T+YPP
Sbjct: 119 MVFPYVNMLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPP 159
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 43.2 bits (97), Expect = 0.004
Identities = 29/119 (24%), Positives = 50/119 (42%)
Frame = +3
Query: 204 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 383
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178
Query: 384 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLS 560
VD +S+ ++GI + F+++ +F+ + L+L+S
Sbjct: 179 WVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKLFFNKISIFMWTCLCSNILILIS 237
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 43.2 bits (97), Expect = 0.004
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +3
Query: 60 SLRLLIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 233
+L +IR EL +P S GD Y +VTAH N L+P +G+
Sbjct: 80 ALATMIRMELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGS 139
Query: 234 PDIAFPRINNIRF 272
D+A+PR+N+I F
Sbjct: 140 KDVAYPRLNSIGF 152
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 42.3 bits (95), Expect = 0.008
Identities = 39/167 (23%), Positives = 59/167 (35%)
Frame = +3
Query: 63 LRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 242
L L IR +L P + YN ++T HA N +PL LG D+
Sbjct: 53 LALAIRVQLALPEQTLLVGTTYNQVLTMHAAIMLFFFLIPLGLFGFGNYFLPLQLGVRDV 112
Query: 243 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 422
A PR+N G T Y PL+ + G SV + ++ L
Sbjct: 113 ALPRLNTFAVWLFIASLILVVLGLFNGGAPSVGWTFYYPLTMDGNQTGVSVFMV--AVIL 170
Query: 423 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
G+ S ++P+F ++ T+ L LL+L
Sbjct: 171 NGLGSLLGSANFAATIVNLRAPGMGLWKMPVFAWSIFATSILQLLTL 217
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 41.5 bits (93), Expect = 0.013
Identities = 42/170 (24%), Positives = 67/170 (39%), Gaps = 4/170 (2%)
Frame = +3
Query: 63 LRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 242
LR ++ + G L + + Y +VT H N L+PL +GA D+
Sbjct: 83 LRPILGGWITEAGKL--EPEFYLALVTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDM 140
Query: 243 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG-*TVYPPLSS---NIAHRGRSVDLAIF 410
A +N + + +E G +G +YPPLS+ ++ G + + +
Sbjct: 141 ASGFMNMLSYWFFFGSSVIMFASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLI 200
Query: 411 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLS 560
S+ L IS SF +LPL + A ITA + LLS
Sbjct: 201 SMALFIISVLLGGINYITTVINLRVKGMSFTRLPLTIWAFFITAIIGLLS 250
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 40.3 bits (90), Expect = 0.030
Identities = 33/151 (21%), Positives = 53/151 (35%), Gaps = 3/151 (1%)
Frame = +3
Query: 120 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 299
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 300 XXXXXIVENGAGTG*TVYP---PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 470
G G T YP L+ G + + + G SS
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTI 209
Query: 471 XXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 563
+F +LP+ + + ITA L +L
Sbjct: 210 INMRAPGMTFFRLPMTIWGLFITAILQAFAL 240
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 39.5 bits (88), Expect = 0.053
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = +3
Query: 57 TSLRLLIRAELGNPGSLIGDDQIYNTIVTAHA 152
+S+ +LIR EL GS++ +QIYNT+VT+HA
Sbjct: 15 SSMSMLIRLELETCGSVLRSEQIYNTLVTSHA 46
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 39.1 bits (87), Expect = 0.070
Identities = 23/57 (40%), Positives = 27/57 (47%)
Frame = +2
Query: 248 PTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 418
P NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 38.3 bits (85), Expect = 0.12
Identities = 36/167 (21%), Positives = 61/167 (36%), Gaps = 1/167 (0%)
Frame = +3
Query: 63 LRLLIRAELGNP-GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPD 239
L L++R +L P L+G D YN I T H L+P +L A D
Sbjct: 60 LGLIMRTQLAVPENDLVGQD-FYNQIFTVHGTTMMFLFAVPVVEALGVM-LLPQMLAARD 117
Query: 240 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 419
+ FPR++ + G +YPPL+ G + D + +
Sbjct: 118 LPFPRLSAFAIWAYIVGGLVFFSTVFYDLAPKGGWFMYPPLTLKEYSPGDNADFWLLGIG 177
Query: 420 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLS 560
IS+ S ++P+F A+ I A +++++
Sbjct: 178 FIEISAIAGAIEIIVGTLRTRPPGMSLTRMPIFAWAMLIFAAMIMIA 224
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 38.3 bits (85), Expect = 0.12
Identities = 29/102 (28%), Positives = 41/102 (40%)
Frame = +3
Query: 63 LRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 242
L LL R EL + G+ + YN V+ H N LVPL +GA D+
Sbjct: 43 LALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFWFISPFAFGFA-NYLVPLQIGADDL 101
Query: 243 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSS 368
AFPR+N + + G T+Y PL++
Sbjct: 102 AFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMYAPLNT 143
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 37.9 bits (84), Expect = 0.16
Identities = 34/151 (22%), Positives = 56/151 (37%)
Frame = +3
Query: 69 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 248
L++R +L P + + Y+++ T H N L PL+LG+ D+AF
Sbjct: 72 LVMRIQLARPNATVLTPAQYDSLFTMHGVTMIFLYALPVLSGFA-NYLWPLMLGSRDMAF 130
Query: 249 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
PR+ + + G Y PL+S G ++D+ + L G
Sbjct: 131 PRLTAFSYWSFLFAGLFLYASFPLGAVPDGGWFNYVPLTSLDYSAGANIDIYGLGMILLG 190
Query: 429 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 521
IS+ S D+LP+ V
Sbjct: 191 ISTTGGAANFVVTLLRMRAHGMSIDRLPIIV 221
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 36.7 bits (81), Expect = 0.37
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +3
Query: 72 LIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 251
++R +L PG + + +N + T HA N +PL++GA D+AFP
Sbjct: 53 IMRLQLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMIGARDVAFP 111
Query: 252 RIN 260
R+N
Sbjct: 112 RLN 114
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 36.7 bits (81), Expect = 0.37
Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 1/108 (0%)
Frame = +3
Query: 210 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRG 386
L+PL +G+ D+ +PR+N + + + G TG TVY PLSS
Sbjct: 111 LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSSFKFTPY 170
Query: 387 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 530
D A ++ L GI + LPLFV AV
Sbjct: 171 LGADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPLFVWAV 218
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 34.3 bits (75), Expect = 2.0
Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Frame = +3
Query: 204 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS-SNIAH 380
N LVP ++GA D+ +P+IN + F ++ G +Y PLS +
Sbjct: 80 NYLVPRMIGAHDLYWPKINALSFWMLVPAVILAAISPLL-GAVDLGWYMYAPLSVETTVN 138
Query: 381 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLS 560
G +L +L L+G+SS + ++PLFV TA L++++
Sbjct: 139 YGLGTNLIQIALILSGLSS--TLTGVNFVMTITKMKKVPYLKMPLFVWGFFTTAILMIIA 196
Query: 561 L 563
+
Sbjct: 197 M 197
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 33.5 bits (73), Expect = 3.5
Identities = 27/125 (21%), Positives = 48/125 (38%)
Frame = +3
Query: 63 LRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 242
L +L+R +L PG+ +N T H L+P +LGA D+
Sbjct: 78 LAVLMRVQLAVPGNDFLSADRFNQFFTMHGSAMMFLFAVPMFEAISII-LLPALLGARDL 136
Query: 243 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 422
FPR++ + + + +G +YPPL++ G D+ + L
Sbjct: 137 PFPRLSAYGYWCFLIGGVFVMGSILFDAAPKSGWFMYPPLATQ--DEGLGSDIWLLGLSF 194
Query: 423 AGISS 437
++S
Sbjct: 195 IEVAS 199
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 33.1 bits (72), Expect = 4.6
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Frame = +3
Query: 90 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 269
G PG ++ + Y +++T H N +P+ +GA D+AFPR N +
Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133
Query: 270 FXXXXXXXXXXXXXXIVENGAG-TG*TVYPPLSS 368
F + +G +G T Y LS+
Sbjct: 134 FWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSA 167
>UniRef50_Q8ID15 Cluster: Putative uncharacterized protein
MAL13P1.352; n=2; Plasmodium|Rep: Putative
uncharacterized protein MAL13P1.352 - Plasmodium
falciparum (isolate 3D7)
Length = 1106
Score = 32.3 bits (70), Expect = 8.1
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 281 TPLPYIINFKKNCRKWCRN 337
T L Y + KK+CRKWCRN
Sbjct: 697 TKLMYCVIKKKHCRKWCRN 715
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,392,041
Number of Sequences: 1657284
Number of extensions: 6189944
Number of successful extensions: 11741
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 11225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11613
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37904934977
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -