Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0815
(519 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 30 0.24
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 29 0.55
SPAC23C11.01 |||ER membrane protein, ICE2 family|Schizosaccharom... 28 0.96
SPCC794.11c |||ENTH domain protein Ent3|Schizosaccharomyces pomb... 27 1.7
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 26 2.9
SPBC32C12.02 |ste11|aff1, stex|transcription factor Ste11|Schizo... 26 3.9
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 26 3.9
SPAPB1A10.14 |||F-box protein, unnamed|Schizosaccharomyces pombe... 25 5.1
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 25 6.8
SPCC338.07c |||NatA N-acetyltransferase complex subunit |Schizos... 25 9.0
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 29.9 bits (64), Expect = 0.24
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +1
Query: 34 ASGGRLTAKLHASSARQHHAGVYTCSEQPVQRVRVLVEPAPQTSSPDSSTIAPVTEPTQE 213
ASG + + S+ + H Y S+ +V PAP T +P ++ PV + ++
Sbjct: 135 ASGSKYSVHTSNSTPQSKHNAFYDASQTFGSTAKVAPAPAPSTKTPLANISKPVVQAQKD 194
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 28.7 bits (61), Expect = 0.55
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +2
Query: 83 STTPESTHAASNPCSAYGSWWSLRLRHHHPTRQRLLRSPSPPKNWSIMRP*STSLDARS 259
S +P S H ++ P S + + HHH + SP+ P + + P ++ D+ S
Sbjct: 96 SQSPTSPHPSNQPAMLSPSTAASQHHHHHSSSSSYAVSPTSPTSPTSSGPIGSNFDSAS 154
>SPAC23C11.01 |||ER membrane protein, ICE2
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 27.9 bits (59), Expect = 0.96
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 26 TRLLPVAD*QQNCTRLQLGSTTPESTHAASNPCSAYGSWWSLRLRHHHPT 175
TR+LP Q N L+ T+ + + +PC + +L L+H +PT
Sbjct: 342 TRILPAI--QNNIIFLEYSRTSKQGMWSILSPCILIAVYTNLLLQHLYPT 389
>SPCC794.11c |||ENTH domain protein Ent3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 476
Score = 27.1 bits (57), Expect = 1.7
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = +2
Query: 77 LGSTTPESTHAASNPCS--AYGSWWSL---RLRHHHPTRQRLLRSPSPP 208
LG T+ + T A S+ + A+GS WS ++ + TR+R++ S S P
Sbjct: 413 LGLTSQQPTAAKSSGSNGDAFGSLWSSAVNKVHQENSTRERVVSSSSEP 461
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 26.2 bits (55), Expect = 2.9
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 312 EEQRASRRGGRPQGAVRAPEQGAHLPDQGPQ*RGRLRQLHVRPQEPNGTYQSLDG 476
++Q+ S+ +PQ Q P Q Q + + RQLH Q+P T S +G
Sbjct: 167 QQQQQSQPQQQPQQQQHQQPQQPQPPQQPLQQQQQQRQLHSGIQQPVSTIVSQNG 221
>SPBC32C12.02 |ste11|aff1, stex|transcription factor
Ste11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 468
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 142 VEPAPQTSSPDSSTIAPVTEPTQELVNYEALKYIVGRPFNLNCTLA 279
++ P T S +++I+P T T + ++ +Y+ G P ++ T A
Sbjct: 299 IDARPSTPSCPNASISPKTPNTGDHYGFDGAEYL-GTPLSVGSTTA 343
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 25.8 bits (54), Expect = 3.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 346 LKERYELQNKGLTFQIKGRSNEDDYGNYTCGLKNQTG 456
+KE EL G G SNEDD+ + C ++ G
Sbjct: 11 MKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDG 47
>SPAPB1A10.14 |||F-box protein, unnamed|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 243
Score = 25.4 bits (53), Expect = 5.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 46 RLTAKLHASSARQHHAGVYTCSEQPVQRVR 135
R+ L SS +H A +++C + P+ RVR
Sbjct: 153 RIHVTLSRSSCDRHQADIFSCFQDPI-RVR 181
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 25.0 bits (52), Expect = 6.8
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +2
Query: 56 QNCTRLQLGSTTPESTHAASNPCSAYGSWWSLRLRHHHPTRQRLLRSP 199
Q+C + + TPE S P S S R R H R R RSP
Sbjct: 538 QSCNEI---TNTPEPIQDLSIPIHYPSSRVSRRHRFHRALRSRFSRSP 582
>SPCC338.07c |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 729
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 373 KGLTFQIKGRSNEDDYGNYTCGLKNQTGHIKAWMVTGNVHAKMTKD 510
KG+ G + E Y N GL+N G W + G + ++ KD
Sbjct: 50 KGILLHSLGNTKEG-YDNVRLGLRNDVGSGVCWHIFGLI-SRADKD 93
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.130 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,102,071
Number of Sequences: 5004
Number of extensions: 41298
Number of successful extensions: 162
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 210309424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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