Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0815
(519 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0233 - 16061182-16061714,16062765-16063578 32 0.32
07_03_1770 - 29382508-29382591,29382901-29383041,29383134-293835... 31 0.73
05_06_0206 + 26369089-26369143,26369627-26369733,26369814-263706... 31 0.73
03_02_0691 + 10432615-10433109,10433155-10433216,10433526-104335... 29 1.7
03_01_0536 - 4020235-4021161,4022760-4022808,4023203-4023267 29 1.7
08_01_0203 + 1639993-1641141 29 2.2
02_05_0425 - 28845707-28846189,28846262-28846403,28846496-288469... 29 2.2
01_05_0279 + 20318440-20318688,20318785-20318931,20319449-203196... 29 2.2
05_04_0274 - 19636163-19636280,19636359-19636423,19636485-196366... 29 3.0
04_03_0576 + 17374494-17374538,17374645-17374902 28 3.9
01_07_0189 + 41875088-41875149,41875322-41875392,41875809-418759... 28 3.9
11_03_0176 - 11260900-11261286,11261459-11261593,11262971-112631... 28 5.2
10_08_0661 + 19656669-19656905,19657390-19657869,19659519-19659800 28 5.2
09_01_0155 - 2301903-2302151,2302334-2302491,2302651-2302819,230... 27 6.8
08_01_0524 - 4560471-4560572,4560864-4560971,4561413-4561556,456... 27 6.8
02_04_0561 + 23879976-23879981,23880531-23882558,23882687-238827... 27 6.8
03_06_0123 - 31821915-31822094,31822187-31822324,31822413-318228... 27 9.0
>10_08_0233 - 16061182-16061714,16062765-16063578
Length = 448
Score = 31.9 bits (69), Expect = 0.32
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 70 SSARQHHAGVYTCSEQPVQRVRVLVEPAPQTSSPDSSTIAPVTEPT 207
SS R+HH GV T + P+ P P + +P +S +A PT
Sbjct: 110 SSRRRHHLGVPTVNGAPLCSSSSSALPPPHSRTPPASPLAAARGPT 155
>07_03_1770 -
29382508-29382591,29382901-29383041,29383134-29383520,
29383685-29383930,29385396-29385437,29385973-29386461
Length = 462
Score = 30.7 bits (66), Expect = 0.73
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +3
Query: 300 DRMEEEQRASRRGGRPQGAVRAPEQGAHLPDQGPQ*RGRLRQL 428
DR E A R GR Q + PE A LP+ P + RLR L
Sbjct: 29 DRKFEPPAAPSRVGRKQRKQKGPEAAARLPNVAPLSKCRLRLL 71
>05_06_0206 +
26369089-26369143,26369627-26369733,26369814-26370647,
26370781-26370939,26371070-26371410,26373894-26373991,
26374244-26374350,26374715-26375266,26375366-26375524,
26375631-26376005
Length = 928
Score = 30.7 bits (66), Expect = 0.73
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +1
Query: 34 ASGGRLTAK-LHASSARQHHAGVYTCSEQP 120
+ GG L K LH SS QHH YTC++ P
Sbjct: 287 SDGGLLPVKNLHLSSFYQHHTIQYTCAKLP 316
>03_02_0691 +
10432615-10433109,10433155-10433216,10433526-10433565,
10434562-10434807,10435020-10435189,10435323-10435539,
10435615-10435755,10435943-10436026
Length = 484
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +3
Query: 300 DRMEEEQRASRRGGRPQGAVRAPEQGAHLPDQGPQ*RGRLRQL 428
DR E A R GR Q + PE A LP P + RLR L
Sbjct: 31 DRKFEPPAAPSRVGRKQRKQKGPEAAARLPAVAPLSKCRLRLL 73
>03_01_0536 - 4020235-4021161,4022760-4022808,4023203-4023267
Length = 346
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 92 PESTHAASNPCSAYGSWWSLRLRHHHPTRQRLLRSPSP 205
P +T ++S+ CS+YG + S H R R +R+ P
Sbjct: 121 PHATTSSSSECSSYGGFSSSEAESSHHRRLRPIRTTVP 158
>08_01_0203 + 1639993-1641141
Length = 382
Score = 29.1 bits (62), Expect = 2.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 39 RWPTDSKTARVFSSAAP 89
RWP D T+RVFS A P
Sbjct: 109 RWPMDGSTSRVFSQAFP 125
>02_05_0425 -
28845707-28846189,28846262-28846403,28846496-28846971,
28848817-28848848,28849429-28849572,28849770-28849841,
28850281-28850296
Length = 454
Score = 29.1 bits (62), Expect = 2.2
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = -2
Query: 287 SGTARVQFKLNGRPTMYFKAS*LTSSWVGSVTGAIVDESGDDV*GAGSTKTRTRCTGCS 111
SG+ R Q+K G P++ SS + + G I+DESG GAG T R T S
Sbjct: 97 SGSGRHQYKSGGSPSLRTSRF-HRSSRLAAYPG-IIDESGFTSDGAGEAYTYMRTTTAS 153
>01_05_0279 +
20318440-20318688,20318785-20318931,20319449-20319611,
20319770-20319887,20320607-20320676,20320774-20320854,
20320924-20320959,20321129-20321149,20321586-20321642,
20321716-20321827,20321905-20322178,20322454-20322556,
20323244-20323459,20324615-20324665,20325339-20327963
Length = 1440
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Frame = +1
Query: 358 YELQNKGLTFQIKGRSNE------DDYGNYTCGLKNQTGHIKAW 471
Y + +GL F+I+ +E D +G +T +K + H+KAW
Sbjct: 608 YVKKIRGLAFEIEDAVDEFTYKLEDKHGGFTAKMKKRIKHVKAW 651
>05_04_0274 -
19636163-19636280,19636359-19636423,19636485-19636637,
19636738-19637043,19637137-19637314,19637452-19637687,
19637835-19638032,19638171-19638293,19638729-19639013,
19639186-19639326,19639799-19640188,19640465-19640647,
19640934-19641020
Length = 820
Score = 28.7 bits (61), Expect = 3.0
Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Frame = +3
Query: 336 GGRPQGAVRAPEQGAHLP--DQGPQ*RGRLRQLHVRPQEPNGTYQSLDGHGKRARQDDQG 509
G GA+R P+ G +LP DQG G R P G G R QG
Sbjct: 69 GVSDSGALRGPDVGGYLPLIDQGTSTAGGCRYRQAVPAGRGGRLDVDTNSGVRRGFLPQG 128
Query: 510 RQR 518
R+R
Sbjct: 129 RRR 131
>04_03_0576 + 17374494-17374538,17374645-17374902
Length = 100
Score = 28.3 bits (60), Expect = 3.9
Identities = 23/65 (35%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Frame = +1
Query: 4 PRAAGIRHEA-ASGGRLTAKLHASSARQHHAGVYTCSEQPVQRVRVLVEPAPQTSSPDSS 180
PR G H + SGG A L +S A A E V R E PQ D S
Sbjct: 22 PREGGSGHPSFGSGGSAYASLGSSGASAMAATPARVKETTV-ATRATAETLPQAKEVDLS 80
Query: 181 TIAPV 195
APV
Sbjct: 81 PTAPV 85
>01_07_0189 +
41875088-41875149,41875322-41875392,41875809-41875902,
41876285-41876360,41877130-41877293,41877428-41877605,
41877687-41877809,41877895-41877990,41878091-41878372
Length = 381
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 273 SRRATGFV*DRMEEEQRASRRGGRPQGAVRAPEQGAHLPDQ 395
+RR G R++ +++GG PQG V E+ HL +Q
Sbjct: 20 ARRICGMA-SRIDANDHGNQQGGNPQGPVGTAERLEHLLNQ 59
>11_03_0176 -
11260900-11261286,11261459-11261593,11262971-11263117,
11263754-11263926,11264661-11264748,11265587-11265804,
11266367-11266424,11267133-11267219
Length = 430
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 146 SLRLRHHHPTRQRLLRSPSPP 208
+L LR HP +RLLR P PP
Sbjct: 4 ALLLRRGHPFLRRLLRPPPPP 24
>10_08_0661 + 19656669-19656905,19657390-19657869,19659519-19659800
Length = 332
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 92 PESTHAASNPCSAYGSWWSLRLRHHHP 172
P AA+ +YG W+LR+ HH P
Sbjct: 169 PAEDAAAAYGRQSYGDQWALRVSHHAP 195
>09_01_0155 -
2301903-2302151,2302334-2302491,2302651-2302819,
2303796-2304839,2305792-2306075,2306318-2307333,
2307937-2308085
Length = 1022
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 361 ELQNKGLTFQIKGRSNEDDYG 423
E+QN G TF + G S+ED+ G
Sbjct: 194 EMQNDGATFLLDGGSSEDNLG 214
>08_01_0524 -
4560471-4560572,4560864-4560971,4561413-4561556,
4561655-4561747,4561906-4561968,4562086-4562133,
4562677-4562835,4563251-4563589
Length = 351
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 146 SLRLRHHHPTRQRLLRSPSPP 208
+L HHH R +LR P+PP
Sbjct: 25 ALSQHHHHQQRHLVLRPPAPP 45
>02_04_0561 +
23879976-23879981,23880531-23882558,23882687-23882722,
23882826-23882939,23883158-23883226,23883311-23883445
Length = 795
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 420 RQLHVRPQEPNGTYQSLDGHGKRAR 494
+Q+ PQ+PNGT +GKR R
Sbjct: 747 QQMFQVPQQPNGTMPDTSANGKRKR 771
>03_06_0123 -
31821915-31822094,31822187-31822324,31822413-31822817,
31822897-31823212,31823305-31823543,31823800-31823903,
31823987-31824145,31824326-31824510,31825318-31825427,
31826900-31826947,31827047-31827241,31827354-31827422,
31829521-31829620,31829879-31829940
Length = 769
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/68 (22%), Positives = 30/68 (44%)
Frame = +1
Query: 19 IRHEAASGGRLTAKLHASSARQHHAGVYTCSEQPVQRVRVLVEPAPQTSSPDSSTIAPVT 198
++ + +GG + + + R AGV ++ + R V +T SP S+ + V
Sbjct: 250 VKQKRRAGGGIASTAYKKWERDAMAGVSLVADAAEELERNTVNVDARTLSPSSNNVCTVD 309
Query: 199 EPTQELVN 222
+P +N
Sbjct: 310 DPGTNRMN 317
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.130 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,582,742
Number of Sequences: 37544
Number of extensions: 336973
Number of successful extensions: 1032
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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