Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0815
(519 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19207| Best HMM Match : ig (HMM E-Value=1.2e-11) 41 5e-04
SB_41626| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 36 0.026
SB_40708| Best HMM Match : SRCR (HMM E-Value=0) 33 0.11
SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.57
SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7) 31 0.57
SB_43700| Best HMM Match : SRCR (HMM E-Value=0) 30 1.00
SB_47260| Best HMM Match : ig (HMM E-Value=4.3e-13) 30 1.3
SB_42486| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 30 1.3
SB_5639| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_47306| Best HMM Match : I-set (HMM E-Value=0) 29 1.7
SB_47305| Best HMM Match : I-set (HMM E-Value=0) 29 1.7
SB_34561| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_51910| Best HMM Match : ig (HMM E-Value=4.9e-05) 29 2.3
SB_22837| Best HMM Match : REJ (HMM E-Value=0.057) 29 2.3
SB_10883| Best HMM Match : ig (HMM E-Value=7.00649e-43) 29 2.3
SB_56444| Best HMM Match : fn3 (HMM E-Value=1.2e-21) 29 2.3
SB_41690| Best HMM Match : DSL (HMM E-Value=0) 29 3.0
SB_30961| Best HMM Match : I-set (HMM E-Value=0) 29 3.0
SB_18484| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_8388| Best HMM Match : ig (HMM E-Value=8.80001e-41) 29 3.0
SB_5499| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_50833| Best HMM Match : Thyroglobulin_1 (HMM E-Value=1.1e-08) 28 4.0
SB_49916| Best HMM Match : ig (HMM E-Value=8.5e-06) 28 4.0
SB_49771| Best HMM Match : Peptidase_M14 (HMM E-Value=1.1e-34) 28 4.0
SB_526| Best HMM Match : GRP (HMM E-Value=8.5) 28 4.0
SB_41623| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_40500| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_38293| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_22838| Best HMM Match : Arrestin_N (HMM E-Value=1.1e-30) 28 4.0
SB_8818| Best HMM Match : I-set (HMM E-Value=0) 28 4.0
SB_45513| Best HMM Match : COXG (HMM E-Value=1.3) 28 5.3
SB_16058| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_51757| Best HMM Match : Hormone_recep (HMM E-Value=6.4e-37) 28 5.3
SB_27603| Best HMM Match : ig (HMM E-Value=2.9e-10) 28 5.3
SB_26631| Best HMM Match : ig (HMM E-Value=1.6e-22) 28 5.3
SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19) 27 7.0
SB_8553| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.0
SB_9202| Best HMM Match : ig (HMM E-Value=5e-40) 27 9.3
SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0) 27 9.3
SB_1072| Best HMM Match : Tektin (HMM E-Value=2.5) 27 9.3
SB_46040| Best HMM Match : PTN_MK_N (HMM E-Value=5.4) 27 9.3
SB_26064| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
>SB_19207| Best HMM Match : ig (HMM E-Value=1.2e-11)
Length = 418
Score = 41.1 bits (92), Expect = 5e-04
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
Frame = +1
Query: 154 PQTSSPDSSTIAPVT-EPTQELVNYEALKYIVGRPFNLNCTLAVPLDSFEIVWKKNSVPL 330
P SP+ T VT + E + I G L C L+ F I W KN P+
Sbjct: 112 PGPGSPEYKTCIRVTMKAVSFTAKVENITMIAGMQVTLKCRLSRKKIPFNITWLKNGQPM 171
Query: 331 GEVAGLKERYELQNKGLTFQIKGRSNEDDYGNYTCGLKNQTGHIKA 468
K + G +IK R+ ++D GNYTC ++ ++A
Sbjct: 172 TS----KYKIRRFKWGSRLRIK-RARQEDAGNYTCVVRANGQEVRA 212
>SB_41626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 753
Score = 38.7 bits (86), Expect = 0.003
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +1
Query: 244 VGRPFNLNCTLAVPLDSFEIVWKKNSVPLGEVAGLKERYELQNKGLTFQIKGRSNEDDYG 423
+G L C A + E++W + + GEV + + +G IK R E+DYG
Sbjct: 226 IGESLELRC-FATGNPTPEVIWL-HELENGEVVPVDPGHVFSVEGSLVVIKPRIEENDYG 283
Query: 424 NYTCGLKNQTGHI--KAWMVTGNVHAK 498
YTC N+ G+ A +++G AK
Sbjct: 284 PYTCHASNRHGNTTKSALVLSGTTLAK 310
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 35.5 bits (78), Expect = 0.026
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 1/103 (0%)
Frame = +1
Query: 151 APQTSSPDSSTIAPVTEPTQELVNYEALKYIVGRPFNLNCTL-AVPLDSFEIVWKKNSVP 327
A +T + D P Q + + ++ G+ CT+ P S E W KN +P
Sbjct: 3335 AKRTYNIDIEASEPKGSTPQFIDLMQPVEVTEGQTATFECTVKGYPRPSIE--WFKNGLP 3392
Query: 328 LGEVAGLKERYELQNKGLTFQIKGRSNEDDYGNYTCGLKNQTG 456
L E + YE LT + DD GNY C +N G
Sbjct: 3393 LKENERIASTYEGALSSLTI---NQCTIDDEGNYKCVARNSFG 3432
Score = 28.3 bits (60), Expect = 4.0
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +1
Query: 271 TLAVPLD-SFEIVWKKNSVPLGEVAGLKERYEL-QNKGLTFQIKGRSNEDDYGNYTCGLK 444
TL V L S ++ W K+ GEV +RY + Q+ L + EDD G Y C +
Sbjct: 4096 TLTVKLSGSGDVQWMKD----GEVIEDSKRYVIRQDDDLHMLTILGATEDDLGTYKCVVT 4151
Query: 445 NQTG 456
N+ G
Sbjct: 4152 NKAG 4155
>SB_40708| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1976
Score = 33.5 bits (73), Expect = 0.11
Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = +1
Query: 256 FNLNCTLAVPLDSFEIV-WKKNSVPLGEVAGLKERYELQNKGLTFQIKGRSNEDDYGNYT 432
F + C P+ + I W K+ P+ E R G + D+GNYT
Sbjct: 1659 FRIGCRSVPPVVTPIISDWLKDGKPIDENDVKSLRITTDTSGQL--VVNNVQRSDFGNYT 1716
Query: 433 CGLKNQTGHIKA 468
C LKN G I A
Sbjct: 1717 CVLKNSAGSISA 1728
>SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6119
Score = 31.1 bits (67), Expect = 0.57
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 262 LNCTLA-VPLDSFEIVWKKNSVPLGEVAGLKERYELQNKGLTFQIKGRSNEDDYGNYTCG 438
L+CT++ P + E W ++S+ + E +K E+ N T IK ++ +D G Y C
Sbjct: 28 LSCTISGTPTPNAE--WYRDSIRVRESRRIKS--EVVNGMATLTIK-QTRAEDQGEYKCV 82
Query: 439 LKNQTG 456
L+N+ G
Sbjct: 83 LRNEHG 88
>SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 590
Score = 31.1 bits (67), Expect = 0.57
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +2
Query: 161 HHHPTRQRLLRSPSPPKNWSIM 226
HHHPT Q LL S S P +WSI+
Sbjct: 487 HHHPTGQLLLTSSSSP-HWSII 507
>SB_43700| Best HMM Match : SRCR (HMM E-Value=0)
Length = 967
Score = 30.3 bits (65), Expect = 1.00
Identities = 21/71 (29%), Positives = 27/71 (38%), Gaps = 1/71 (1%)
Frame = +1
Query: 247 GRPFNLNCTLAVPLDSF-EIVWKKNSVPLGEVAGLKERYELQNKGLTFQIKGRSNEDDYG 423
G L CT+ S W K+ + + R E + L F GR+ D G
Sbjct: 887 GDGLTLRCTVESSQPSVGSYTWLKDGAEINLATHPRVRAERGGRDLVFAPVGRA---DQG 943
Query: 424 NYTCGLKNQTG 456
NYTC N G
Sbjct: 944 NYTCEATNSVG 954
>SB_47260| Best HMM Match : ig (HMM E-Value=4.3e-13)
Length = 402
Score = 29.9 bits (64), Expect = 1.3
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Frame = +1
Query: 208 QELVNYEALKYIVGRPFNLNCTLAVPLDSFEIVWKKNSVPLGEVAGLKERYELQNKGLTF 387
++ N ++ +G L+C +F I W K + PL EV R + + L
Sbjct: 28 RDAYNLTQIERYIGDDVTLSCPNHSYQGNFSITWYKYNEPLQEVT---YRDAINTRML-- 82
Query: 388 QIKGRSNEDDYGNYTCGLKNQTGHI--KAWMVTGNVHAKMTK 507
I D G YTC LK ++ ++M+T N H++ K
Sbjct: 83 -ILSNLLLADGGRYTCVLKTESNRTLNTSYMLTINDHSQNKK 123
>SB_42486| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1554
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 346 LKERYELQNKGLT-FQIKGRSNEDDYGNYTCGLKNQTGHIKA 468
LK + +L + ++ IKG DD+G YTC N G KA
Sbjct: 292 LKTKRKLSTEYISHLTIKGARYPDDHGIYTCSAANSLGVAKA 333
>SB_5639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1384
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 355 RYELQNKGLTFQIKGRSNEDDYGNYTCGLKNQTG 456
R +LQN T + G + +DD G+YTC +N G
Sbjct: 622 RAKLQNDNSTLLLSGLT-KDDAGSYTCIARNNAG 654
>SB_47306| Best HMM Match : I-set (HMM E-Value=0)
Length = 1260
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +1
Query: 301 IVWKKNSVPLGEVAGLKERYELQNKGLTFQIKGRSNEDDYGNYTCGLKNQTGHIKA 468
+ W K PL + ++ +YE + LTF K + ED+ YTC N G + +
Sbjct: 459 VEWLKEGKPLSRDSHVRPKYEAEIATLTF--KSATLEDE-ALYTCVATNALGSVSS 511
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +1
Query: 298 EIVWKKNSVPLGEVAGLKERYELQNKGLTFQIKGRSNEDDYGNYTCGLKNQTG 456
++ W KN PL + + + R +T + + DD G YTC N G
Sbjct: 989 DVKWMKNGKPLKDSSKVDVRSRDDTHNVTIKT---AKVDDSGEYTCEATNSVG 1038
Score = 28.7 bits (61), Expect = 3.0
Identities = 33/121 (27%), Positives = 49/121 (40%)
Frame = +1
Query: 94 GVYTCSEQPVQRVRVLVEPAPQTSSPDSSTIAPVTEPTQELVNYEALKYIVGRPFNLNCT 273
GV S +PV V EP + PD T+APV E ++V +GR L+
Sbjct: 1151 GVVPISPEPVSPV--FEEPVK--AEPDEGTVAPVIEGLNDVV------VPLGREAKLDAR 1200
Query: 274 LAVPLDSFEIVWKKNSVPLGEVAGLKERYELQNKGLTFQIKGRSNEDDYGNYTCGLKNQT 453
+ E+ W K+ + E AG E + G+ + +D G Y C N+
Sbjct: 1201 I-TGSPKPEVEWIKDG-QVVEDAGRFLYVENEEPGIFSLVIDDVQPEDAGKYKCIAFNEK 1258
Query: 454 G 456
G
Sbjct: 1259 G 1259
>SB_47305| Best HMM Match : I-set (HMM E-Value=0)
Length = 5832
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 301 IVWKKNSVPLGEVAGLKERYELQNKG--LTFQIKGRSNEDDYGNYTCGLKNQTG 456
IVW K+ GE+ R+E++++G TF S ED G YTC N+ G
Sbjct: 2365 IVWYKD----GEMVRDVRRFEIRSRGDIYTFATYSASAEDA-GTYTCEASNKLG 2413
Score = 29.5 bits (63), Expect = 1.7
Identities = 29/126 (23%), Positives = 54/126 (42%)
Frame = +1
Query: 79 RQHHAGVYTCSEQPVQRVRVLVEPAPQTSSPDSSTIAPVTEPTQELVNYEALKYIVGRPF 258
+ HAG Y+C E + + Q +P+++ AP ++L+ A + G
Sbjct: 5213 KSEHAGTYSC-EATSKLGNTSAKFDVQIQAPEAAPKAPAF--LKQLLPQNARE---GDVV 5266
Query: 259 NLNCTLAVPLDSFEIVWKKNSVPLGEVAGLKERYELQNKGLTFQIKGRSNEDDYGNYTCG 438
+C + + EI W ++ V + + Y+ ++ L+ +N D G Y C
Sbjct: 5267 KFSCKVTGYPEP-EIEWTRDGVSMESDERVTTWYDGEHSTLSIH---NANHADSGMYKCT 5322
Query: 439 LKNQTG 456
LKN +G
Sbjct: 5323 LKNNSG 5328
Score = 28.3 bits (60), Expect = 4.0
Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 1/108 (0%)
Frame = +1
Query: 136 VLVEPAPQTS-SPDSSTIAPVTEPTQELVNYEALKYIVGRPFNLNCTLAVPLDSFEIVWK 312
V A QTS D S P + E ++ G NL+ T+ E+VW
Sbjct: 65 VATNDAGQTSLRGDLSVKEKQIAPQIKEKEQEPIEVFEGESVNLDLTITGKPKP-EVVWY 123
Query: 313 KNSVPLGEVAGLKERYELQNKGLTFQIKGRSNEDDYGNYTCGLKNQTG 456
K+ PL + + + + L+ ++ +D G Y C KN+ G
Sbjct: 124 KDGKPLRKTKSIDLKSTDDSYFLSIP---KATPNDSGKYKCEAKNKIG 168
>SB_34561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 448
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +3
Query: 300 DRMEEEQRASRRGGRPQGAVRAPEQGAHLPDQGPQ*RGRLRQLHVRPQEPNGTYQ--SLD 473
D + ++ + S RGGR +G R P + P + RG + RP+E +Q D
Sbjct: 147 DDIIKQNKKSSRGGRGRGGSRGPGRRGGGPVGRGRTRGNRSTPYSRPRELPDRWQHDKFD 206
Query: 474 GHGKRARQDDQG 509
G G R G
Sbjct: 207 GRGSGGRSFSGG 218
>SB_51910| Best HMM Match : ig (HMM E-Value=4.9e-05)
Length = 562
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +1
Query: 301 IVWKKNSVPLGEVAGLKERYELQNKGLTFQIKGRSNEDDYGNYTCGLKNQTGHI 462
+ W KN VPL + + ++ +QI D+ GNYTC + G++
Sbjct: 445 VTWTKNGVPLDRYSVM---VPVRPHSTQYQIPEVQKSDE-GNYTCSVYQHMGYV 494
>SB_22837| Best HMM Match : REJ (HMM E-Value=0.057)
Length = 643
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Frame = +1
Query: 121 VQRVRVLVEPAPQTSSPDSSTIAP----VTEPTQELV 219
V V V V+PAP+ + P + I+P +T PT E+V
Sbjct: 21 VAHVNVTVKPAPRVNKPPRADISPKEQTITLPTNEVV 57
>SB_10883| Best HMM Match : ig (HMM E-Value=7.00649e-43)
Length = 1280
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = +1
Query: 274 LAVPLDSFEIVWKKNSVPLGEVAGLKERYELQNKGLTFQIKGRSNEDDYGNYTCGLKNQT 453
LA+ SF+ WKK+ V G+ LT GR DD GNYTC + +
Sbjct: 477 LAIGFQSFKNFWKKDGVFRGD-----------GSSLTLSSVGR---DDSGNYTCNVTSTC 522
Query: 454 G 456
G
Sbjct: 523 G 523
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = +1
Query: 274 LAVPLDSFEIVWKKNSVPLGEVAGLKERYELQNKGLTFQIKGRSNEDDYGNYTCGLKNQT 453
LA+ SF+ WKK+ V G+ LT GR DD GNYTC + +
Sbjct: 1175 LAIGFQSFKNFWKKDGVFKGD-----------GSSLTLSSVGR---DDSGNYTCNVTSTC 1220
Query: 454 G 456
G
Sbjct: 1221 G 1221
>SB_56444| Best HMM Match : fn3 (HMM E-Value=1.2e-21)
Length = 651
Score = 29.1 bits (62), Expect = 2.3
Identities = 30/122 (24%), Positives = 44/122 (36%), Gaps = 6/122 (4%)
Frame = +1
Query: 136 VLVEPAPQTSSPDSSTIAPVTEPTQELVNYEALKYIVGRPFNLNCTLAVPLDSFEIVWKK 315
VL AP SP + ++ + L + + GR +L CT + I W K
Sbjct: 322 VLKPKAPANLSPCCLVLFRSSDKPEMLDSTQNTSSWNGRLLSLQCTARGSPYPY-ITWYK 380
Query: 316 NSVPLGEVAGLKERYELQNKGLTFQIKGRSNEDDYGNYTCGLKNQTG------HIKAWMV 477
L +V + G QI+ DYG Y C N G H+ W++
Sbjct: 381 PDGQLIKVGACSIK-----DGSLLQIRTTQYTGDYGEYKCRASNLIGSAEAVIHVMQWLI 435
Query: 478 TG 483
G
Sbjct: 436 PG 437
>SB_41690| Best HMM Match : DSL (HMM E-Value=0)
Length = 2798
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 319 SVPLGEVAGLKERYELQNKGLTFQIKGRSNEDDYGNYTCGLKNQTG 456
S+ LG + R E +G+TF IK ++ D+ +Y C N TG
Sbjct: 983 SLGLGRIVRHFARQETTAQGITFVIKKQALSSDHQHYNC--DNTTG 1026
>SB_30961| Best HMM Match : I-set (HMM E-Value=0)
Length = 1018
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 376 GLTFQIKGRSNEDDYGNYTCGLKNQTG 456
G FQ+ G++N D G YTC N G
Sbjct: 544 GSVFQV-GKNNRSDAGTYTCSATNYLG 569
>SB_18484| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -1
Query: 84 LPS*RRVQFCCQSATGSSLVP-NSCSPGD 1
LP R ++C +S VP NSCSPGD
Sbjct: 36 LPVARLARYCMRSPDAHCRVPSNSCSPGD 64
>SB_8388| Best HMM Match : ig (HMM E-Value=8.80001e-41)
Length = 666
Score = 28.7 bits (61), Expect = 3.0
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 298 EIVWKKNS--VPLGEVAGLKERYELQNKGLTFQIKGRSNEDDYGNYTCGLKNQTGHIKAW 471
++ W KN VPL ++ +Y+ Q T +I G +D G YTC +N GH W
Sbjct: 607 KVTWFKNGYRVPLDDI-----KYK-QTSADTLEIAGLVPQDT-GIYTCRAENARGH-DTW 658
Query: 472 MVT 480
+T
Sbjct: 659 NIT 661
>SB_5499| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 28.7 bits (61), Expect = 3.0
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 298 EIVWKKNS--VPLGEVAGLKERYELQNKGLTFQIKGRSNEDDYGNYTCGLKNQTGHIKAW 471
++ W KN VPL ++ +Y+ Q T +I G +D G YTC +N GH W
Sbjct: 124 KVTWFKNGYRVPLDDI-----KYK-QTSADTLEIAGLVPQDT-GIYTCRAENARGH-DTW 175
Query: 472 MVT 480
+T
Sbjct: 176 NIT 178
>SB_50833| Best HMM Match : Thyroglobulin_1 (HMM E-Value=1.1e-08)
Length = 280
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +1
Query: 298 EIVWKKNSVPLGEVAGLKERYELQNKGLTFQIKGRSNEDDYGNYTCGLKNQTG 456
+ +W + L E + G+T E DYG+Y C ++N+ G
Sbjct: 51 QAIWMREGKQLLECKNCVTHIDNTKHGVTTLRVTPYRESDYGDYICKVRNENG 103
>SB_49916| Best HMM Match : ig (HMM E-Value=8.5e-06)
Length = 465
Score = 28.3 bits (60), Expect = 4.0
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +1
Query: 289 DSFEIVWKKNSVPLGEVAGLKERYELQNKGL-TFQIKGRSNEDDYGNYTCGLKNQTGHIK 465
DS + + P +V K L N+ + T I R YGNYTC N G
Sbjct: 20 DSISLDCTASGTPAPKVTWRKNGLILSNQSIYTITITTRYQ---YGNYTCEASNIAGK-T 75
Query: 466 AWMVTGNVHAKMTKDANV 519
AW G + +++ + NV
Sbjct: 76 AWQ--GQIQSQVFPEENV 91
>SB_49771| Best HMM Match : Peptidase_M14 (HMM E-Value=1.1e-34)
Length = 635
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 256 FNLNCTLAVPLDSFEIVWKKNSVPL 330
F ++C P+DSFE + K N++P+
Sbjct: 282 FFVSCCKYPPIDSFESILKSNAIPM 306
>SB_526| Best HMM Match : GRP (HMM E-Value=8.5)
Length = 149
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 2 SPGLQEFGTRLLPVAD*QQNCTRLQLGSTTPESTHAASNPCSAYGS 139
SPGLQEF L A N T L +T ST+A++ + + +
Sbjct: 17 SPGLQEFDATLHATALPSTNATTATLHATALPSTNASTTTATLHAT 62
>SB_41623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1604
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Frame = +1
Query: 214 LVNYEALKYIVGRPFNLNCTLAVPLDSFEIVWKKNSVPLGE-VAGLKERYELQNKGLTFQ 390
LV L + G L CT+ + W K++ L + V L L
Sbjct: 124 LVTPSQLSVVEGASVTLTCTVQASSQVGAVTWYKDATQLADGVQDYTSDDSLHKNTLRLT 183
Query: 391 IKGRSNEDDYGNYTCGLKNQTGHIKAW 471
G+ D+ G Y C +KN ++ ++
Sbjct: 184 NVGK---DEGGMYECRVKNSFSYVNSY 207
>SB_40500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3
Query: 3 PPGCRNSARGCFR 41
PPGCRNS GC R
Sbjct: 18 PPGCRNSIEGCNR 30
>SB_38293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1732
Score = 28.3 bits (60), Expect = 4.0
Identities = 29/103 (28%), Positives = 42/103 (40%)
Frame = +1
Query: 16 GIRHEAASGGRLTAKLHASSARQHHAGVYTCSEQPVQRVRVLVEPAPQTSSPDSSTIAPV 195
G+ H+ ++ G L L+ A H VYTC P V V Q + D
Sbjct: 1149 GVHHQTSASGVL--HLNPPLAGDH---VYTCV--PNNTVGTGVNKTVQIAVKDKP----- 1196
Query: 196 TEPTQELVNYEALKYIVGRPFNLNCTLAVPLDSFEIVWKKNSV 324
E TQ +N Y+ G P +L C + +V++KN V
Sbjct: 1197 -EATQFSLNTSDGAYLKGEPVSLYCNSSAKPALCHVVFRKNDV 1238
Score = 27.1 bits (57), Expect = 9.3
Identities = 25/86 (29%), Positives = 34/86 (39%)
Frame = +1
Query: 241 IVGRPFNLNCTLAVPLDSFEIVWKKNSVPLGEVAGLKERYELQNKGLTFQIKGRSNEDDY 420
I G LNCT A + I W K V A L+ + + QI + D
Sbjct: 690 IEGESLTLNCT-ATGCPTPNITWTKQGVS----AALRSNITTE---IIHQIAS-VQKSDA 740
Query: 421 GNYTCGLKNQTGHIKAWMVTGNVHAK 498
G YTC N+ G + ++ VH K
Sbjct: 741 GRYTCAANNEIGAVSR-TLSVTVHYK 765
>SB_22838| Best HMM Match : Arrestin_N (HMM E-Value=1.1e-30)
Length = 173
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +1
Query: 271 TLAVPLDSFEIVWKKNSVPLGE-VAGLKERYELQNKGLTFQIKGRSNEDDYGNYTCGLKN 447
T + L+ ++ V GE V KE + ++ + F + R+N D+ NYT KN
Sbjct: 6 TFEIVLNRKNRIYHPGEVVSGECVVYSKESLKFRSVHVEFHGEARTNWDEMENYTTTHKN 65
Query: 448 QTGHI-KAWMVTGNVH 492
+ + K + NVH
Sbjct: 66 EEVYFNKKTSLLANVH 81
>SB_8818| Best HMM Match : I-set (HMM E-Value=0)
Length = 2787
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 298 EIVWKKNSVPLGEVAGLKERYELQNKGLTFQIKGRSNE-DDYGNYTCGLKNQTG 456
++ W K+ P+ + R ++ +G T+ + + E +D G+YTC +N+ G
Sbjct: 854 DVKWFKDGKPIRQ----SSRLNIRPRGDTYTLNIHTTEPEDAGSYTCEAQNKMG 903
>SB_45513| Best HMM Match : COXG (HMM E-Value=1.3)
Length = 296
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 34 ASGGRLTAKLHASSARQHHAGVYTCSEQPVQRVRVLVEPAPQTSSPDSSTIAPVTE 201
+ G A HAS+ H + + + S PVQ + EPA + S S I+ +E
Sbjct: 187 SDAGSPIALKHASALNSHASPLNSASFSPVQAQAIGDEPAVRRSGGSESDISSSSE 242
>SB_16058| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 412
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 125 SAYGSWWSLRLRHHHPTRQRLLRSPSPPKNWSIM 226
+A+ + L L+ H TR R+ SP PPK + M
Sbjct: 111 TAFNDVFELDLKDHKWTRLRISGSPPPPKECATM 144
>SB_51757| Best HMM Match : Hormone_recep (HMM E-Value=6.4e-37)
Length = 405
Score = 27.9 bits (59), Expect = 5.3
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 89 WCCRAEDACSFAVSRPPEAASCRI 18
W C+A++ACS + E +CR+
Sbjct: 58 WVCKAQNACSVKTTSRNECKACRM 81
>SB_27603| Best HMM Match : ig (HMM E-Value=2.9e-10)
Length = 135
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 355 RYELQNKGLTFQIKGRSNEDDYGNYTCGLKNQTGHIKA 468
R+EL N+ + + S D G+YTC N+ G + A
Sbjct: 45 RHELANRSMNLHLFNISR-DHQGHYTCTAYNRAGTVNA 81
>SB_26631| Best HMM Match : ig (HMM E-Value=1.6e-22)
Length = 1123
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +1
Query: 175 SSTIAPVTEPTQELVNYEALKYIVGRPFNLNCTLAVPLDSFEIVWKKNS 321
+STI+ + + VN A G PF L CT V + I W KNS
Sbjct: 438 NSTISIDVQENIKFVNISAPMVKRGVPFTLECTTNV-VRPVSITWYKNS 485
>SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19)
Length = 486
Score = 27.5 bits (58), Expect = 7.0
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +3
Query: 309 EEEQRASRRGGRPQGAV---RAPEQGAHLPDQGPQ*RGRLRQLHVRPQEPNGTYQSLDGH 479
E+E R + R +G+ R+P+ A + + R R RQL + P+ DG
Sbjct: 233 EDEPRFNPRNAEKEGSRSRRRSPDPYASSDSEDERDRIRWRQLEKERRWPHEQRSRRDGS 292
Query: 480 GKRARQDDQGR 512
R+R +GR
Sbjct: 293 HSRSRSRSRGR 303
>SB_8553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 982
Score = 27.5 bits (58), Expect = 7.0
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Frame = +1
Query: 136 VLVEPAPQTSSPDSSTI-APVTEPTQELVNYEALKYI-VGRPFNLNCTLAVPLDSFEIVW 309
V P + S+ + T+ +P T +L + L + VG L+C+ A +VW
Sbjct: 125 VAKRPCGEISANITLTVDSPPTFTVSKLKREKTLIAMPVGNSLKLDCS-ADGKPRPTVVW 183
Query: 310 KKNSVPLGEVAGLKERYELQNKGLTFQIKGRSNEDDYGNYTCGLKNQTGHI 462
KN P + G++ L+ ++ DD G YTC + N G I
Sbjct: 184 LKNGKPFLKRDGVE--LSLRPYQYVLSMRDAVPSDD-GRYTCNVSNALGWI 231
>SB_9202| Best HMM Match : ig (HMM E-Value=5e-40)
Length = 1604
Score = 27.1 bits (57), Expect = 9.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 391 IKGRSNEDDYGNYTCGLKNQTG 456
+ R+ +DD GNYTC N G
Sbjct: 490 VVSRAKKDDAGNYTCVATNSQG 511
>SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2681
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +1
Query: 103 TCSEQPVQRVRVLVEPAPQTSSPDSSTIAPVTEPTQELVN 222
TC R+R P PQ D S + P T+ + ++N
Sbjct: 738 TCGGGKRVRMRSCTNPTPQFGGSDCSVLGPETQTERCMIN 777
>SB_1072| Best HMM Match : Tektin (HMM E-Value=2.5)
Length = 465
Score = 27.1 bits (57), Expect = 9.3
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +1
Query: 349 KERYELQNKGLTFQIKGRSNEDDYGNYTCGLK 444
K ELQNKG QI RSN ++Y T LK
Sbjct: 151 KTAEELQNKGELDQIWVRSNIEEYERITKRLK 182
>SB_46040| Best HMM Match : PTN_MK_N (HMM E-Value=5.4)
Length = 248
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 119 PCSAYGSWWSLRLRHHHPTRQRLLRSP 199
PC G WSL LR H T ++L P
Sbjct: 40 PCDVCGVQWSLTLRKHEFTDRQLHGKP 66
>SB_26064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 27.1 bits (57), Expect = 9.3
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +1
Query: 115 QPVQRVRVLVEPAPQTSSPDSSTIAPVTEPTQELVNYEALKYIVGRPFNLNCTLA 279
+P + V V+P + P + + PVTEP E V E + I G PF +LA
Sbjct: 274 EPDEPVTEDVKPVTEPIEPVTEDLKPVTEPV-EPVTEELVTEIAG-PFTKPISLA 326
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.130 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,332,131
Number of Sequences: 59808
Number of extensions: 375071
Number of successful extensions: 2143
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2138
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1160542895
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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