Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0814
(592 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58699| Best HMM Match : UCR_14kD (HMM E-Value=3.6e-37) 94 9e-20
SB_3002| Best HMM Match : Pkinase (HMM E-Value=4.1e-17) 31 0.70
SB_54614| Best HMM Match : Peptidase_A17 (HMM E-Value=1.2e-38) 29 2.1
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 29 2.1
SB_36418| Best HMM Match : Ion_trans (HMM E-Value=3.5e-28) 29 3.8
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38) 28 5.0
SB_44511| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40) 27 8.7
SB_22055| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_28421| Best HMM Match : Oxysterol_BP (HMM E-Value=4.5e-11) 27 8.7
>SB_58699| Best HMM Match : UCR_14kD (HMM E-Value=3.6e-37)
Length = 116
Score = 93.9 bits (223), Expect = 9e-20
Identities = 44/98 (44%), Positives = 63/98 (64%)
Frame = -1
Query: 400 SDSLSKWAYNLSGFNKYGLLRDDCLHETPDVTEALRRLPSHVVDERNFRIVRAIQLSMQK 221
S + +W G+ + GL R+D + E DV EA+RR+P + RNFRIVRAI +M+
Sbjct: 19 SAAFREWYIYACGYRQIGLKREDLIIEDSDVAEAVRRIPEEERNLRNFRIVRAIDTTMKM 78
Query: 220 TILPKEEWTKYEEDSLYLTPIVEQVEKERLEREQWEKE 107
LP+E WTK ED YL P++++V+ ER ERE W+K+
Sbjct: 79 KWLPEELWTKPSEDVPYLDPVIQKVKAERKERELWDKQ 116
>SB_3002| Best HMM Match : Pkinase (HMM E-Value=4.1e-17)
Length = 683
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = -1
Query: 346 LLRDDCLHETPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILPKEEWTKYE 185
LL + LH+ PD +AL + + + + FRI +A+ S +K I + + Y+
Sbjct: 343 LLAEPALHKDPDTIKALWKATVNELGDLEFRIQQAMTSSSKKPIAEEYSFLVYD 396
>SB_54614| Best HMM Match : Peptidase_A17 (HMM E-Value=1.2e-38)
Length = 1935
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = -1
Query: 337 DDCLHETPDVTEALRRLPS--HVVDERNFRIVRAIQLSMQ-KTILPKEEWTKYEED 179
DDCLH TP EA+R ++ FR+ + + S + + LP+ E T +D
Sbjct: 1166 DDCLHSTPTEAEAVRLATDLRELLARGGFRLTKFVSNSKELLSSLPESERTTSVKD 1221
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 235 LSMQKTILPKEEWTKYEEDSLYLTPIVEQVEKERLERE-QWEKEY 104
LS + T P + T E+D L L + Q EK+ ER+ +W + Y
Sbjct: 102 LSSEPTQQPTKPLTVQEQDDLALAQALAQSEKDEAERKRRWGESY 146
>SB_36418| Best HMM Match : Ion_trans (HMM E-Value=3.5e-28)
Length = 466
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -1
Query: 235 LSMQKTILPKEEWTKYEEDSLYLTPIVEQVEKERLERE 122
LS KT LPKE+W K E++S P V Q ++ +R+
Sbjct: 8 LSPPKT-LPKEQWAKREKNSEGFKPGVMQEKRTLFKRD 44
>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
Length = 2114
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = -1
Query: 241 IQLSMQKTILPKEEWTKYEEDSLYLTPIVEQVEKERLEREQWEKE 107
I+ S+QKT PK++ + E+D E+ EK++ ++E E++
Sbjct: 1868 IEKSLQKTFHPKKKENEEEDDKKEKKEENEEEEKKKKKKENEEED 1912
>SB_44511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -1
Query: 232 SMQKTILPKEEWTKYEEDSLYLTPIVEQVEKERLEREQWEKE 107
S + +L ++E K EE + LTP ++ +LE+++ EKE
Sbjct: 8 SNEHLLLNEKEPPKKEEPKIVLTPEEQEELDRKLEKQRMEKE 49
>SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40)
Length = 1042
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 383 FAEAVTSVNSRGSESHHGSCSKSHFIDSQIYDFNVILTQTTRSK-TNLLVM 532
F + V + S HHGSC +H+ I+ I+ + + TNL V+
Sbjct: 240 FKKHVCRIKGNFSYLHHGSCRGTHYAFFLIFPLRAIMRIRLQDRITNLEVL 290
>SB_22055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 496 SNNQKQNQFACDGNTHSVNQNRGHPFLEN 582
S+N QN+ +GNT + + RG FL +
Sbjct: 251 SDNDPQNRITFEGNTEPLEKTRGGVFLRH 279
>SB_28421| Best HMM Match : Oxysterol_BP (HMM E-Value=4.5e-11)
Length = 378
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 258 KFLSSTTWDGSLRSASVTSGVSCKQSSRNKP 350
+++ +WD SL +GV+C RN+P
Sbjct: 223 RYVIEGSWDKSLECIPQDTGVTCPTDCRNRP 253
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,659,640
Number of Sequences: 59808
Number of extensions: 319086
Number of successful extensions: 1058
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1434459094
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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