Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0814
(592 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g32470.1 68417.m04622 ubiquinol-cytochrome C reductase comple... 56 2e-08
At5g25450.1 68418.m03023 ubiquinol-cytochrome C reductase comple... 54 5e-08
At4g32470.2 68417.m04623 ubiquinol-cytochrome C reductase comple... 49 3e-06
At1g13420.1 68414.m01566 sulfotransferase family protein similar... 31 0.57
At5g28150.1 68418.m03402 expressed protein 30 1.0
At3g48830.1 68416.m05333 polynucleotide adenylyltransferase fami... 29 2.3
At4g17220.1 68417.m02590 expressed protein 29 3.1
At2g22720.3 68415.m02692 expressed protein 28 4.1
At2g22720.2 68415.m02691 expressed protein 28 4.1
At2g22720.1 68415.m02693 expressed protein 28 4.1
At5g15450.1 68418.m01808 heat shock protein 100, putative / HSP1... 28 5.4
At1g74600.1 68414.m08641 pentatricopeptide (PPR) repeat-containi... 28 5.4
At3g60370.1 68416.m06752 immunophilin / FKBP-type peptidyl-proly... 27 7.1
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 27 7.1
At1g21600.1 68414.m02700 expressed protein similar to hypothetic... 27 7.1
At4g30020.1 68417.m04272 subtilase family protein contains simil... 27 9.4
At2g12900.1 68415.m01408 hypothetical protein similar to transcr... 27 9.4
>At4g32470.1 68417.m04622 ubiquinol-cytochrome C reductase complex
14 kDa protein, putative similar to SP|P48502
Ubiquinol-cytochrome C reductase complex 14 kDa protein
(EC 1.10.2.2) (CR14) {Solanum tuberosum}; contains Pfam
profile PF02271: Ubiquinol-cytochrome C reductase
complex 14kD subunit
Length = 122
Score = 56.0 bits (129), Expect = 2e-08
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Frame = -1
Query: 355 KYGLLRDDCLHE--TPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILPKEEWTKYEE 182
+YGL DD + + D+ EA+ RLP VVD RN R+ RA+ LSM+ LPK+
Sbjct: 30 RYGLRYDDLYDQYYSMDIKEAMNRLPREVVDARNQRLKRAMDLSMKHEYLPKDLQAVQTP 89
Query: 181 DSLYLTPIVEQVEKERLERE 122
YL ++ VE+E ERE
Sbjct: 90 FRGYLQDMLALVERESKERE 109
>At5g25450.1 68418.m03023 ubiquinol-cytochrome C reductase complex
14 kDa protein, putative similar to SP|P48502
Ubiquinol-cytochrome C reductase complex 14 kDa protein
(EC 1.10.2.2) (CR14) {Solanum tuberosum}; contains Pfam
profile PF02271: Ubiquinol-cytochrome C reductase
complex 14kD subunit
Length = 122
Score = 54.4 bits (125), Expect = 5e-08
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Frame = -1
Query: 355 KYGLLRDDC---LHETPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILPKEEWTKYE 185
+YGL DD L++ D+ EAL RLP +VD RN R++RA+ LSM+ LP
Sbjct: 30 RYGLRYDDLYDPLYDL-DIKEALNRLPREIVDARNQRLMRAMDLSMKHEYLPDNLQAVQT 88
Query: 184 EDSLYLTPIVEQVEKERLERE 122
YL ++ V++ER ERE
Sbjct: 89 PFRSYLQDMLALVKRERAERE 109
>At4g32470.2 68417.m04623 ubiquinol-cytochrome C reductase complex
14 kDa protein, putative similar to SP|P48502
Ubiquinol-cytochrome C reductase complex 14 kDa protein
(EC 1.10.2.2) (CR14) {Solanum tuberosum}; contains Pfam
profile PF02271: Ubiquinol-cytochrome C reductase
complex 14kD subunit
Length = 101
Score = 48.8 bits (111), Expect = 3e-06
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = -1
Query: 355 KYGLLRDDCLHE--TPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILPKE 203
+YGL DD + + D+ EA+ RLP VVD RN R+ RA+ LSM+ LPK+
Sbjct: 30 RYGLRYDDLYDQYYSMDIKEAMNRLPREVVDARNQRLKRAMDLSMKHEYLPKD 82
>At1g13420.1 68414.m01566 sulfotransferase family protein similar to
steroid sulfotransferase 1 GI:3420004 from (Brassica
napus); contains Pfam profile PF00685: Sulfotransferase
domain
Length = 331
Score = 31.1 bits (67), Expect = 0.57
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = -2
Query: 303 KHSADFHPMLLTRETSVLYVPYSSPCKKQSYLKKSGQNMKKIPYT*PQLLS 151
KH++D HP LLT L VPY + YLK S ++ K+P + P+L S
Sbjct: 98 KHTSDNHP-LLTHNPHEL-VPY---LELDLYLKSSKPDLTKLPSSSPRLFS 143
>At5g28150.1 68418.m03402 expressed protein
Length = 289
Score = 30.3 bits (65), Expect = 1.0
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +3
Query: 162 GVKYRESSSYFVHSSLGR-IVFCMESCMARTIRKFLSSTTWDGSLRSASVTSGV--SCKQ 332
GV+ +SSS + +V C+ C R R L + TW +L SVT GV SC Q
Sbjct: 12 GVQVADSSSSSNSGKNAQNLVTCIYQCRIRG-RNCLITVTWTKNLMGQSVTVGVDDSCNQ 70
Query: 333 S 335
S
Sbjct: 71 S 71
>At3g48830.1 68416.m05333 polynucleotide adenylyltransferase family
protein / RNA recognition motif (RRM)-containing protein
similar to SP|P13685 Poly(A) polymerase (EC 2.7.7.19)
{Escherichia coli O157:H7}; contains Pfam profiles
PF01743: polyA polymerase family protein, PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 881
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -1
Query: 256 RIVRAIQLSMQKTILPKEEWTKYEEDSLYLTPIVEQVEKERLEREQWEK 110
RI ++ + QK +PK++ + ED L PI+++ KE E E E+
Sbjct: 466 RIFECVKENGQKGFVPKQDSKREPEDDLETKPILKK-HKENSEEENKEQ 513
>At4g17220.1 68417.m02590 expressed protein
Length = 513
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = -1
Query: 340 RDDCLHETPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILPKEEWTKYEEDSLYLTP 161
++D L EALRR+ +H D+ + + I + + K E + +ED L
Sbjct: 82 KEDALAAQDAAEEALRRVYTHQQDDDSLPLESIIAPLESQIKIHKHEISALQEDKKALER 141
Query: 160 IVEQVEKERLEREQ 119
+ + E LE E+
Sbjct: 142 LTKSKESALLEAER 155
>At2g22720.3 68415.m02692 expressed protein
Length = 569
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Frame = -1
Query: 229 MQKTILPKEEWTKYEEDSLYLTPIVEQVEKE-----RLEREQWEKE 107
M + +LP + +++Y++D + + E ++KE R+ RE+ E+E
Sbjct: 503 MLRQLLPPKRFSRYDDDDINMEAGFEDIQKEERRSARIAREEDERE 548
>At2g22720.2 68415.m02691 expressed protein
Length = 672
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Frame = -1
Query: 229 MQKTILPKEEWTKYEEDSLYLTPIVEQVEKE-----RLEREQWEKE 107
M + +LP + +++Y++D + + E ++KE R+ RE+ E+E
Sbjct: 606 MLRQLLPPKRFSRYDDDDINMEAGFEDIQKEERRSARIAREEDERE 651
>At2g22720.1 68415.m02693 expressed protein
Length = 340
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Frame = -1
Query: 229 MQKTILPKEEWTKYEEDSLYLTPIVEQVEKE-----RLEREQWEKE 107
M + +LP + +++Y++D + + E ++KE R+ RE+ E+E
Sbjct: 274 MLRQLLPPKRFSRYDDDDINMEAGFEDIQKEERRSARIAREEDERE 319
>At5g15450.1 68418.m01808 heat shock protein 100, putative / HSP100,
putative / heat shock protein clpB, putative /
HSP100/ClpB, putative similar to HSP100/ClpB GI:9651530
[Phaseolus lunatus]
Length = 968
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = -1
Query: 268 ERNFRIVRAIQLSMQKTILPKEEWTKYEEDSLYLTPIVEQVEKERLEREQWEKEY 104
ER RI + L +K E+W L I E++++ LE +Q E+EY
Sbjct: 515 ERLNRIETELVLLKEKQAELTEQWEHERSVMSRLQSIKEEIDRVNLEIQQAEREY 569
>At1g74600.1 68414.m08641 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 895
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 382 WAYNLSGFNKYGLLRD 335
WA +SGFN+YG LR+
Sbjct: 519 WASMISGFNEYGYLRE 534
>At3g60370.1 68416.m06752 immunophilin / FKBP-type peptidyl-prolyl
cis-trans isomerase family protein SP:Q9M222; similar to
FKBP-type peptidyl-prolyl cis-trans isomerase fkpA
precursor (PPiase) (Rotamase)(SP:Q8X880) [Escherichia
coli O157:H7] ; contains Pfam PF00254: peptidyl-prolyl
cis-trans isomerase, FKBP-type
Length = 242
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -2
Query: 258 SVLYVPYSSPCKKQSYLKKSGQNMKKIPYT*PQLLSKLRKRGWRESS 118
S++YV +SPC L S + K PY +LL + KR RE++
Sbjct: 47 SLVYVLVASPCLLLPALSSSAKTKSKSPYDERRLLEQ-NKRIQRENN 92
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -1
Query: 337 DDCLHETPDVTEALRR-LPSHVVDERNFRIVRAIQLSMQKTILPKEEWTKY 188
DD +H E RR +PS ++ +IVRAI+ K P+EE Y
Sbjct: 242 DDAIHPLSSAPEPKRRFIPSKWEAKKVVKIVRAIRKGWIKFDKPEEEPNVY 292
>At1g21600.1 68414.m02700 expressed protein similar to hypothetical
protein GB:AAD41412 GI:5263310 from [Arabidopsis
thaliana]
Length = 328
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -1
Query: 262 NFRIVRAIQLSMQKTILPKEEWTKYEED 179
+F+I+ + T++ +EEWTK ED
Sbjct: 284 SFKIIHVGERDDPTTVIEREEWTKTRED 311
>At4g30020.1 68417.m04272 subtilase family protein contains
similarity to meiotic serine proteinase TMP GI:6468325
from [Lycopersicon esculentum]
Length = 816
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -1
Query: 346 LLRDDCLHETPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILPKEEW 197
L+ H +PD E LRR P +R++++ + + Q LP + W
Sbjct: 92 LINGFAAHVSPDQAEMLRRAPGVKSVDRDWKVRKLTTHTPQFLGLPTDVW 141
>At2g12900.1 68415.m01408 hypothetical protein similar to
transcription factor(bZIP family) VSF-1 GI:3425907 from
[Lycopersicon esculentum]
Length = 264
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 256 GSFSRQQHGMEVCGVLQLHQEFHASN 333
GS Q+ ME C VLQ +EF SN
Sbjct: 217 GSVELQRLKMETCEVLQYRREFDRSN 242
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,681,004
Number of Sequences: 28952
Number of extensions: 225098
Number of successful extensions: 669
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1171109464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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