Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0809
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    24   0.93 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.6  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   3.8  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   3.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.0  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   8.7  

>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 377 RCSRKAQAMRKKVRHFM 427
           +CS K + M KKV HF+
Sbjct: 72  KCSEKQKEMTKKVIHFL 88


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -1

Query: 567 TASTGCWFVFKD 532
           TAST CW VF D
Sbjct: 529 TASTRCWEVFMD 540


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -3

Query: 460 RSVARTVLSPQHKMPDLLPHRLSFPAAAILWSQTLYLRFSF 338
           +SVA T  S  H++ D L       +A   +SQT+   + F
Sbjct: 168 QSVASTASSADHQIVDRLLSHAPIDSANQWYSQTIDNSYQF 208


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -3

Query: 460 RSVARTVLSPQHKMPDLLPHRLSFPAAAILWSQTLYLRFSF 338
           +SVA T  S  H++ D L       +A   +SQT+   + F
Sbjct: 159 QSVASTASSADHQIVDRLLSHAPIDSANQWYSQTIDNSYQF 199


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
 Frame = -3

Query: 478 CLY--WALRSVARTVLSPQHKMPDLLPH 401
           C Y  W+   V     +P+H +PDL  H
Sbjct: 91  CYYTNWSQYRVKIGKFTPEHIIPDLCTH 118


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 121 DVTGADEDRSKF 156
           D+T +D DRSK+
Sbjct: 59  DITTSDRDRSKY 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.314    0.129    0.368 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,991
Number of Sequences: 336
Number of extensions: 2590
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)