Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0809
(645 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_9533| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_54572| Best HMM Match : CARDB (HMM E-Value=4.4) 31 0.61
SB_25298| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06) 31 1.1
SB_34771| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_23539| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_57910| Best HMM Match : SAPS (HMM E-Value=2.8) 28 5.7
SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_31373| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4) 28 7.5
SB_31120| Best HMM Match : Pox_F16 (HMM E-Value=5) 28 7.5
SB_4935| Best HMM Match : Pox_F16 (HMM E-Value=5.3) 28 7.5
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 28 7.5
SB_33076| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4) 28 7.5
SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34) 28 7.5
SB_59548| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_7607| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_56828| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
>SB_9533| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 593
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 97 EDTLRQFCDVTGADEDRSKFFLESSNWQLDVALSSFYE 210
++TL +F D TGAD ++ FL+ +NW + AL +F E
Sbjct: 2 DETLSRFVDRTGADPALARDFLQGTNWNFEEALKAFQE 39
>SB_54572| Best HMM Match : CARDB (HMM E-Value=4.4)
Length = 292
Score = 31.5 bits (68), Expect = 0.61
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 154 FFLESSNWQLDVALSSFYENGGNADEAPA 240
FFL+ +NW L A+ +FY+ + D+ P+
Sbjct: 45 FFLDMANWNLQAAIGAFYDFNCSNDKLPS 73
>SB_25298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 31.1 bits (67), Expect = 0.80
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 185 MLLFQVSMRTVVMQMRLQLIQRVRHHSLFCQTAI-WNHRPSHL 310
+ L+ V +++ + + + +RHH+L QT I NHR HL
Sbjct: 564 LFLYVVLSMAIIIASYISVSKTIRHHNLHLQTTIVLNHRLGHL 606
>SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06)
Length = 825
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 73 EITMSANREDTLRQFCDVTGADEDRSKFFLES 168
++T S N E+TL DV +++ R ++F+ES
Sbjct: 271 KLTESGNTEETLLSVTDVVDSEDGRDEYFMES 302
>SB_34771| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +1
Query: 82 MSANREDTLRQFCDVTGADEDRSKFFLESSNWQLDVALSSFYEN 213
+ +++ + +RQF T +E + L +W+LDVA ++++N
Sbjct: 4 LKSSQREKVRQFIAFTETNERTAITCLNQHDWRLDVASDNYFQN 47
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 73 EITMSANREDTLRQFCDVTGADEDRSKFFLES 168
++T S N E+TL DV +++ R ++F+ES
Sbjct: 249 KLTESGNTEETLLSVTDVVDSEDGRDEYFMES 280
>SB_23539| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1041
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +1
Query: 427 AGGSERSGQQILGPSKGRKDIVSEMFKSVRERG 525
A G+ RSG+++ GP G++ + ++ + VR G
Sbjct: 559 AAGARRSGRRLRGPDAGKRGPLGQIVRKVRRSG 591
>SB_57910| Best HMM Match : SAPS (HMM E-Value=2.8)
Length = 406
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -3
Query: 409 LPHRLSFPAAAILWSQTLYLRFSFFL 332
+PHR+S PA +L S T +R SFF+
Sbjct: 56 VPHRVSLPACHLLNSLTSTVRPSFFI 81
>SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 918
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -3
Query: 493 RRYLS--CLYWALRSVARTVLSPQHKMPDLLPHRLSFPAAAILWSQTLYLRFSFF 335
RR L+ CL++ +R+ + PQ P+L P R + + S L +SFF
Sbjct: 821 RRQLAQLCLFYKIRNNLVNIALPQQFQPNLRPSRTNSSKYNQIQSNVLSHSYSFF 875
>SB_31373| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4)
Length = 198
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -3
Query: 493 RRYLS--CLYWALRSVARTVLSPQHKMPDLLPHRLSFPAAAILWSQTLYLRFSFF 335
RR L+ CL++ +R+ + PQ P+L P R + + S L +SFF
Sbjct: 101 RRQLAQLCLFYKIRNNLVNIALPQQFQPNLRPSRTNSSKYNQIQSNVLSHSYSFF 155
>SB_31120| Best HMM Match : Pox_F16 (HMM E-Value=5)
Length = 284
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -3
Query: 493 RRYLS--CLYWALRSVARTVLSPQHKMPDLLPHRLSFPAAAILWSQTLYLRFSFF 335
RR L+ CL++ +R+ + PQ P+L P R + + S L +SFF
Sbjct: 187 RRQLAQLCLFYKIRNNLVNIALPQQFQPNLRPSRTNSSKYNQIQSNVLSHSYSFF 241
>SB_4935| Best HMM Match : Pox_F16 (HMM E-Value=5.3)
Length = 243
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -3
Query: 493 RRYLS--CLYWALRSVARTVLSPQHKMPDLLPHRLSFPAAAILWSQTLYLRFSFF 335
RR L+ CL++ +R+ + PQ P+L P R + + S L +SFF
Sbjct: 146 RRQLAQLCLFYKIRNNLVNIALPQQFQPNLRPSRTNSSKYNQIQSNVLSHSYSFF 200
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -3
Query: 493 RRYLS--CLYWALRSVARTVLSPQHKMPDLLPHRLSFPAAAILWSQTLYLRFSFF 335
RR L+ CL++ +R+ + PQ P+L P R + + S L +SFF
Sbjct: 408 RRQLAQLCLFYKIRNNLVNIALPQQFQPNLRPSRTNSSKYNQIQSNVLSHSYSFF 462
>SB_33076| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4)
Length = 152
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -3
Query: 493 RRYLS--CLYWALRSVARTVLSPQHKMPDLLPHRLSFPAAAILWSQTLYLRFSFF 335
RR L+ CL++ +R+ + PQ P+L P R + + S L +SFF
Sbjct: 55 RRQLAQLCLFYKIRNNLVNIALPQQFQPNLRPSRTNSSKYNQIQSNVLSHSYSFF 109
>SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 788
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -3
Query: 493 RRYLS--CLYWALRSVARTVLSPQHKMPDLLPHRLSFPAAAILWSQTLYLRFSFF 335
RR L+ CL++ +R+ + PQ P+L P R + + S L +SFF
Sbjct: 512 RRQLAQLCLFYKIRNNLVNIALPQQFQPNLRPSRTNSSKYNQIQSNVLSHSYSFF 566
>SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34)
Length = 837
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -3
Query: 493 RRYLS--CLYWALRSVARTVLSPQHKMPDLLPHRLSFPAAAILWSQTLYLRFSFF 335
RR L+ CL++ +R+ + PQ P+L P R + + S L +SFF
Sbjct: 740 RRQLAQLCLFYKIRNNLVNIALPQQFQPNLRPSRTNSSKYNQIQSNVLSHSYSFF 794
>SB_59548| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2835
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3
Query: 229 HLHYHRSHRNLKEQHL 182
HL YH SH+N+ + HL
Sbjct: 1809 HLFYHASHKNITDGHL 1824
>SB_7607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2499
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 545 SSSKTTAPRSLTLLNISETISFLPLLGP 462
SS P +LTL+NI+ TI +P GP
Sbjct: 182 SSQIQENPGTLTLVNITNTIECVPKFGP 209
>SB_56828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 525
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +1
Query: 442 RSGQQILGPSKGRKDIVSEMFKSVRERGAVV 534
++ +++ SKG +D++ KS++E+GA V
Sbjct: 114 KNAEELKSFSKGEEDLLEMQIKSIKEKGADV 144
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.129 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,150,134
Number of Sequences: 59808
Number of extensions: 326230
Number of successful extensions: 919
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1633044375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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