Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0808
         (365 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2HZG6 Cluster: Yellow-d; n=1; Bombyx mori|Rep: Yellow-...    90   1e-17
UniRef50_Q5UUY6 Cluster: Putative uncharacterized protein; n=1; ...    33   2.1  
UniRef50_Q4P4A0 Cluster: Putative uncharacterized protein; n=1; ...    31   6.5  
UniRef50_Q1IPB8 Cluster: Protein containing glyoxalase/bleomycin...    31   8.6  

>UniRef50_Q2HZG6 Cluster: Yellow-d; n=1; Bombyx mori|Rep: Yellow-d -
           Bombyx mori (Silk moth)
          Length = 446

 Score = 89.8 bits (213), Expect = 1e-17
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = +1

Query: 199 MSYGIERFFLLSYCLACCWPGLGAKNNLRVVRQWAELE 312
           MSYGIERFFLLSYCLACCWPGLGAKNNLRVVRQWAELE
Sbjct: 1   MSYGIERFFLLSYCLACCWPGLGAKNNLRVVRQWAELE 38



 Score = 44.4 bits (100), Expect = 7e-04
 Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +2

Query: 227 YC-HIVWRAVGPVSERRIISAW*GNGRNWXFVFPNEEARSYALEKRF 364
           YC    W  +G  +  R++  W        FVFPNEEARSYALEKRF
Sbjct: 13  YCLACCWPGLGAKNNLRVVRQW----AELEFVFPNEEARSYALEKRF 55


>UniRef50_Q5UUY6 Cluster: Putative uncharacterized protein; n=1;
           Antonospora locustae|Rep: Putative uncharacterized
           protein - Antonospora locustae (Nosema locustae)
          Length = 235

 Score = 32.7 bits (71), Expect = 2.1
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 175 LLDAFKLEMSYGIERFFLLSYCLACCWPGLGAKNN 279
           LL A  +  S+G+   F +S+C+ CCW    AK N
Sbjct: 83  LLLAVYVSASHGLACSFFVSFCVRCCWALRTAKRN 117


>UniRef50_Q4P4A0 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 1762

 Score = 31.1 bits (67), Expect = 6.5
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = -1

Query: 326 SETRXSSSAHCLTTRRLFFAPRPGQQHAKQYDNRKNRSIPYDISSLKASNS*GS 165
           +ET    +A C+ T R+ F  R  Q H    D R + ++P+D   +  SNS G+
Sbjct: 72  TETPYHINAACIDTGRVVFRFRSRQSHLGASDARSSAALPHD--GMPRSNSSGA 123


>UniRef50_Q1IPB8 Cluster: Protein containing glyoxalase/bleomycin
           resistance protein/dioxygenase superfamily domain; n=2;
           Bacteria|Rep: Protein containing glyoxalase/bleomycin
           resistance protein/dioxygenase superfamily domain -
           Acidobacteria bacterium (strain Ellin345)
          Length = 136

 Score = 30.7 bits (66), Expect = 8.6
 Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = -3

Query: 357 FSNAYDRASSFGNTXL---QFRPLPHHAEIILRSETG 256
           F  A DRA + G T L   +F P P H EI LR   G
Sbjct: 87  FDAAVDRARALGATVLKWPEFNPAPRHREIWLRDPDG 123


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 325,089,400
Number of Sequences: 1657284
Number of extensions: 5302319
Number of successful extensions: 13809
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13807
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13220924981
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)