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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0808
         (365 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81147-6|CAB03535.1|  506|Caenorhabditis elegans Hypothetical pr...    27   4.1  
Z81097-5|CAB03168.1|  243|Caenorhabditis elegans Hypothetical pr...    27   5.4  
Z69635-6|CAA93461.1|  695|Caenorhabditis elegans Hypothetical pr...    26   9.5  

>Z81147-6|CAB03535.1|  506|Caenorhabditis elegans Hypothetical
           protein T09E11.8 protein.
          Length = 506

 Score = 27.1 bits (57), Expect = 4.1
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +2

Query: 179 WMLLNWKC-RTESSDFFYCHIVWRAVGPVS 265
           W  + W C  T  SD+FYC +  R  G VS
Sbjct: 74  WKPIRWFCLNTTCSDYFYCSMATR-FGSVS 102


>Z81097-5|CAB03168.1|  243|Caenorhabditis elegans Hypothetical
           protein K07A1.7 protein.
          Length = 243

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +1

Query: 190 KLEMSYGIERFFLLSYCLACCWPGLGAKN 276
           K E+S    RF+L   C  C W     KN
Sbjct: 136 KTEISLDGRRFYLQQLCARCLWSDWSCKN 164


>Z69635-6|CAA93461.1|  695|Caenorhabditis elegans Hypothetical
           protein F19B6.4 protein.
          Length = 695

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 225 KKSLDSVRHFQFKSIQQLRILF 160
           KKSL S + F F S+Q + +LF
Sbjct: 457 KKSLPSFKGFAFVSVQMMHMLF 478


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,415,979
Number of Sequences: 27780
Number of extensions: 126618
Number of successful extensions: 360
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 360
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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