Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0807
         (571 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   4.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.4  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   7.4  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 330 CYYYSK*YIRD 298
           CYY SK Y RD
Sbjct: 23  CYYNSKAYFRD 33


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 225 VIFFFIVICSTRNLRF 272
           +  F I+IC  RNL +
Sbjct: 4   ITLFMIIICFERNLSY 19


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/32 (25%), Positives = 15/32 (46%)
 Frame = -1

Query: 571 QIVSKNIKYGCFSTIVFCSAACANFGDASNVY 476
           Q+ +K IK+  F  +    +   +FG A   +
Sbjct: 347 QVSNKKIKFSSFGMLKISRSLLTSFGGALTTF 378


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,056
Number of Sequences: 336
Number of extensions: 2134
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)