Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0807
         (571 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68298-3|CAA92600.2|  357|Caenorhabditis elegans Hypothetical pr...    29   3.1  
U21324-13|AAA62558.1|  357|Caenorhabditis elegans Hypothetical p...    29   3.1  
Z49131-1|CAA88974.1|  122|Caenorhabditis elegans Hypothetical pr...    27   7.2  

>Z68298-3|CAA92600.2|  357|Caenorhabditis elegans Hypothetical
           protein F44D12.4 protein.
          Length = 357

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +1

Query: 79  KEYLFANRIKNS*RSQQCIVKVALPRSNDP 168
           + Y  A  +K+  R ++CI+++  P+S DP
Sbjct: 196 RHYQVARMLKSIRRGEECIIRLIAPKSADP 225


>U21324-13|AAA62558.1|  357|Caenorhabditis elegans Hypothetical
           protein C35D10.2 protein.
          Length = 357

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +1

Query: 79  KEYLFANRIKNS*RSQQCIVKVALPRSNDP 168
           + Y  A  +KN  R ++C+V++  P++ DP
Sbjct: 196 RHYQVARILKNVRRGEECVVRLIAPKTADP 225


>Z49131-1|CAA88974.1|  122|Caenorhabditis elegans Hypothetical
           protein ZC373.2 protein.
          Length = 122

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +3

Query: 357 FISHARRMCVCIFN*FNIN 413
           FIS+ RR CVC FN  N N
Sbjct: 74  FISNDRRTCVCCFNNTNRN 92


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,485,633
Number of Sequences: 27780
Number of extensions: 200570
Number of successful extensions: 396
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 395
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)