Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0805
         (517 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_16098| Best HMM Match : Abhydrolase_1 (HMM E-Value=4.5e-22)         27   6.9  
SB_15794| Best HMM Match : DUF1605 (HMM E-Value=5.9e-12)               27   6.9  
SB_5167| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   6.9  
SB_29153| Best HMM Match : DUF433 (HMM E-Value=1.1)                    27   9.2  

>SB_16098| Best HMM Match : Abhydrolase_1 (HMM E-Value=4.5e-22)
          Length = 863

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
 Frame = +3

Query: 144 FTIHKGTHN*GIRMLSVLTRHGVLTINKITTASFLAGLPEPLFLFTYLIKIPLLFYYGLC 323
           + +  GT N G+R L+   R GVLT+ +  + + L G+ E       L   P+  Y    
Sbjct: 348 YILGTGTGNLGLRGLTRTHRAGVLTVARDMSTNKLVGMEEEDDFDAPLAPTPVKAYVRQK 407

Query: 324 TYII--YLHMYTIQHLKY 371
            + I    HM  ++ L Y
Sbjct: 408 AFPISPEFHMAPVEDLFY 425


>SB_15794| Best HMM Match : DUF1605 (HMM E-Value=5.9e-12)
          Length = 655

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 4   RAAGIRHEAFIYKHYSTNVKRLVFGRVALCLRVYIEIVRCYR 129
           RAA +    FI   YS ++  +   R ALC  +Y +I R  R
Sbjct: 135 RAAAVAKRRFIIDQYSDHLLFVKAFRAALCAGMYPQIARVDR 176


>SB_5167| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 547

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +1

Query: 40  KHYSTNVKRLVFGRVALCLRVYIEIVRCYRYTRGVLPYTKEHIIKVY 180
           K +  N KR    R+ L   +Y+ +  C+RYTR VL Y K   I ++
Sbjct: 24  KDFKDNGKRQSGVRICLAFGLYVVLHICHRYTR-VL-YLKRSEINLF 68


>SB_29153| Best HMM Match : DUF433 (HMM E-Value=1.1)
          Length = 680

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = +3

Query: 312 YGLCTYIIYLHM---YTIQHLKYF*KF*F*FINKMTLD 416
           YG CTY +Y H+   Y+I H  +F      F NK T++
Sbjct: 577 YGQCTYCLYNHVDYGYSISH--FFKPITLTFSNKSTIE 612


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,262,496
Number of Sequences: 59808
Number of extensions: 308736
Number of successful extensions: 807
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)