Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0804
(498 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007220-1|AAH07220.1| 564|Homo sapiens cysteinyl-tRNA syntheta... 110 2e-24
AL157820-1|CAI16971.1| 564|Homo sapiens novel protein protein. 110 2e-24
AL139385-1|CAI17004.1| 564|Homo sapiens novel protein protein. 110 2e-24
AK022180-1|BAB13978.1| 564|Homo sapiens protein ( Homo sapiens ... 110 2e-24
BT009913-1|AAP88915.1| 748|Homo sapiens cysteinyl-tRNA syntheta... 77 3e-14
BC002880-1|AAH02880.1| 748|Homo sapiens cysteinyl-tRNA syntheta... 77 3e-14
AF288207-1|AAG00579.1| 726|Homo sapiens cysteinyl-tRNA syntheta... 77 3e-14
AF288206-1|AAG00578.1| 748|Homo sapiens cytoplasmic cysteinyl-t... 77 3e-14
AK222614-1|BAD96334.1| 726|Homo sapiens cysteine-tRNA ligase is... 76 8e-14
AB208814-1|BAD92051.1| 281|Homo sapiens cysteine-tRNA ligase is... 65 1e-10
L06845-1|AAA73901.1| 595|Homo sapiens cysteinyl-tRNA synthetase... 65 1e-10
AK124731-1|BAC85935.1| 339|Homo sapiens protein ( Homo sapiens ... 31 1.7
BC030156-1|AAH30156.2| 936|Homo sapiens DIP2B protein protein. 31 2.2
BC007671-1|AAH07671.2| 936|Homo sapiens DIP2B protein protein. 31 2.2
AK097369-1|BAC05025.1| 765|Homo sapiens protein ( Homo sapiens ... 31 2.2
AB040896-1|BAA95987.2| 1166|Homo sapiens KIAA1463 protein protein. 31 2.2
AL833400-1|CAD38637.1| 930|Homo sapiens hypothetical protein pr... 30 3.9
AB095948-1|BAC23124.1| 1449|Homo sapiens KIAA2028 protein protein. 30 3.9
BC063313-1|AAH63313.1| 1556|Homo sapiens DIP2 disco-interacting ... 30 5.1
AL669841-2|CAI14620.1| 1556|Homo sapiens novel protein protein. 30 5.1
AL603831-1|CAI40897.1| 1556|Homo sapiens novel protein protein. 30 5.1
AL359957-2|CAI16215.1| 1556|Homo sapiens novel protein protein. 30 5.1
AL157709-2|CAI39594.1| 1556|Homo sapiens novel protein protein. 30 5.1
AB023151-1|BAA76778.2| 1585|Homo sapiens KIAA0934 protein protein. 30 5.1
BC032670-1|AAH32670.1| 357|Homo sapiens protein-L-isoaspartate ... 29 6.8
AK056952-1|BAB71324.1| 357|Homo sapiens protein ( Homo sapiens ... 29 6.8
D80006-1|BAA11501.1| 863|Homo sapiens KIAA0184 protein. 29 9.0
AF490768-1|AAM18046.1| 1567|Homo sapiens KIAA0184 protein protein. 29 9.0
AB273729-1|BAF69070.1| 1571|Homo sapiens Dip2 protein. 29 9.0
>BC007220-1|AAH07220.1| 564|Homo sapiens cysteinyl-tRNA synthetase
2, mitochondrial (putative) protein.
Length = 564
Score = 110 bits (265), Expect = 2e-24
Identities = 51/115 (44%), Positives = 66/115 (57%)
Frame = +3
Query: 147 WLMPNGNPTGIYVYNCIANQRVPIILNDPHIATWYSCGPTVYESAHIGHASCYVKLDIIQ 326
WL P G TG+ VYN + ++ P+I+ A+WYSCGPTVY+ AH+GHA YV+ DII+
Sbjct: 42 WLQPTGRETGVQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIR 101
Query: 327 RILKSFFNIKIVSAMGITXXXXXXXXXGLESKTHFTNIAKQYEHEFWLDMASLNV 491
RIL F IV MGIT E ++A YE +F DMA+L V
Sbjct: 102 RILTKVFGCSIVMVMGITDVDDKIIKRANEMNISPASLASLYEEDFKQDMAALKV 156
>AL157820-1|CAI16971.1| 564|Homo sapiens novel protein protein.
Length = 564
Score = 110 bits (265), Expect = 2e-24
Identities = 51/115 (44%), Positives = 66/115 (57%)
Frame = +3
Query: 147 WLMPNGNPTGIYVYNCIANQRVPIILNDPHIATWYSCGPTVYESAHIGHASCYVKLDIIQ 326
WL P G TG+ VYN + ++ P+I+ A+WYSCGPTVY+ AH+GHA YV+ DII+
Sbjct: 42 WLQPTGRETGVQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIR 101
Query: 327 RILKSFFNIKIVSAMGITXXXXXXXXXGLESKTHFTNIAKQYEHEFWLDMASLNV 491
RIL F IV MGIT E ++A YE +F DMA+L V
Sbjct: 102 RILTKVFGCSIVMVMGITDVDDKIIKRANEMNISPASLASLYEEDFKQDMAALKV 156
>AL139385-1|CAI17004.1| 564|Homo sapiens novel protein protein.
Length = 564
Score = 110 bits (265), Expect = 2e-24
Identities = 51/115 (44%), Positives = 66/115 (57%)
Frame = +3
Query: 147 WLMPNGNPTGIYVYNCIANQRVPIILNDPHIATWYSCGPTVYESAHIGHASCYVKLDIIQ 326
WL P G TG+ VYN + ++ P+I+ A+WYSCGPTVY+ AH+GHA YV+ DII+
Sbjct: 42 WLQPTGRETGVQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIR 101
Query: 327 RILKSFFNIKIVSAMGITXXXXXXXXXGLESKTHFTNIAKQYEHEFWLDMASLNV 491
RIL F IV MGIT E ++A YE +F DMA+L V
Sbjct: 102 RILTKVFGCSIVMVMGITDVDDKIIKRANEMNISPASLASLYEEDFKQDMAALKV 156
>AK022180-1|BAB13978.1| 564|Homo sapiens protein ( Homo sapiens
cDNA FLJ12118 fis, clone MAMMA1000085, weakly similar to
PUTATIVE CYSTEINYL-TRNA SYNTHETASE C29E6.06C (EC
6.1.1.16). ).
Length = 564
Score = 110 bits (265), Expect = 2e-24
Identities = 51/115 (44%), Positives = 66/115 (57%)
Frame = +3
Query: 147 WLMPNGNPTGIYVYNCIANQRVPIILNDPHIATWYSCGPTVYESAHIGHASCYVKLDIIQ 326
WL P G TG+ VYN + ++ P+I+ A+WYSCGPTVY+ AH+GHA YV+ DII+
Sbjct: 42 WLQPTGRETGVQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIR 101
Query: 327 RILKSFFNIKIVSAMGITXXXXXXXXXGLESKTHFTNIAKQYEHEFWLDMASLNV 491
RIL F IV MGIT E ++A YE +F DMA+L V
Sbjct: 102 RILTKVFGCSIVMVMGITDVDDKIIKRANEMNISPASLASLYEEDFKQDMAALKV 156
>BT009913-1|AAP88915.1| 748|Homo sapiens cysteinyl-tRNA synthetase
protein.
Length = 748
Score = 77.0 bits (181), Expect = 3e-14
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +3
Query: 144 KWLMPNGN-PTGIYVYNCIANQRVPIILNDPHIATWYSCGPTVYESAHIGHASCYVKLDI 320
+W P G P +++YN + + I D TWY CGPTVY+++H+GHA Y+ DI
Sbjct: 17 QWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDI 76
Query: 321 IQRILKSFFNIKIVSAMGIT 380
++R+LK +F + M IT
Sbjct: 77 LRRVLKDYFKFDVFYCMNIT 96
>BC002880-1|AAH02880.1| 748|Homo sapiens cysteinyl-tRNA synthetase
protein.
Length = 748
Score = 77.0 bits (181), Expect = 3e-14
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +3
Query: 144 KWLMPNGN-PTGIYVYNCIANQRVPIILNDPHIATWYSCGPTVYESAHIGHASCYVKLDI 320
+W P G P +++YN + + I D TWY CGPTVY+++H+GHA Y+ DI
Sbjct: 17 QWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDI 76
Query: 321 IQRILKSFFNIKIVSAMGIT 380
++R+LK +F + M IT
Sbjct: 77 LRRVLKDYFKFDVFYCMNIT 96
>AF288207-1|AAG00579.1| 726|Homo sapiens cysteinyl-tRNA synthetase
protein.
Length = 726
Score = 77.0 bits (181), Expect = 3e-14
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +3
Query: 144 KWLMPNGN-PTGIYVYNCIANQRVPIILNDPHIATWYSCGPTVYESAHIGHASCYVKLDI 320
+W P G P +++YN + + I D TWY CGPTVY+++H+GHA Y+ DI
Sbjct: 17 QWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDI 76
Query: 321 IQRILKSFFNIKIVSAMGIT 380
++R+LK +F + M IT
Sbjct: 77 LRRVLKDYFKFDVFYCMNIT 96
>AF288206-1|AAG00578.1| 748|Homo sapiens cytoplasmic cysteinyl-tRNA
synthetase protein.
Length = 748
Score = 77.0 bits (181), Expect = 3e-14
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +3
Query: 144 KWLMPNGN-PTGIYVYNCIANQRVPIILNDPHIATWYSCGPTVYESAHIGHASCYVKLDI 320
+W P G P +++YN + + I D TWY CGPTVY+++H+GHA Y+ DI
Sbjct: 17 QWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDI 76
Query: 321 IQRILKSFFNIKIVSAMGIT 380
++R+LK +F + M IT
Sbjct: 77 LRRVLKDYFKFDVFYCMNIT 96
>AK222614-1|BAD96334.1| 726|Homo sapiens cysteine-tRNA ligase
isoform a variant protein.
Length = 726
Score = 75.8 bits (178), Expect = 8e-14
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +3
Query: 144 KWLMPNGN-PTGIYVYNCIANQRVPIILNDPHIATWYSCGPTVYESAHIGHASCYVKLDI 320
+W P G P +++YN + + + D TWY CGPTVY+++H+GHA Y+ DI
Sbjct: 17 QWSPPAGTQPCRLHLYNSLTRNKEVFMPQDGKKVTWYCCGPTVYDASHMGHARSYISFDI 76
Query: 321 IQRILKSFFNIKIVSAMGIT 380
++R+LK +F + M IT
Sbjct: 77 LRRVLKDYFKFDVFYCMNIT 96
>AB208814-1|BAD92051.1| 281|Homo sapiens cysteine-tRNA ligase
isoform b variant protein.
Length = 281
Score = 65.3 bits (152), Expect = 1e-10
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = +3
Query: 219 ILNDPHIATWYSCGPTVYESAHIGHASCYVKLDIIQRILKSFFNIKIVSAMGIT 380
I D TWY CGPTVY+++H+GHA Y+ DI++R+LK +F + M IT
Sbjct: 63 IPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKFDVFYCMNIT 116
>L06845-1|AAA73901.1| 595|Homo sapiens cysteinyl-tRNA synthetase
protein.
Length = 595
Score = 64.9 bits (151), Expect = 1e-10
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = +3
Query: 243 TWYSCGPTVYESAHIGHASCYVKLDIIQRILKSFFNIKIVSAMGIT 380
TWY CGPTVY+++H+GHA Y+ DI++R+LK +F + M IT
Sbjct: 8 TWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKFDVFYCMNIT 53
>AK124731-1|BAC85935.1| 339|Homo sapiens protein ( Homo sapiens
cDNA FLJ42741 fis, clone BRAWH2016702. ).
Length = 339
Score = 31.5 bits (68), Expect = 1.7
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +3
Query: 186 YNCIANQRVPIILNDPHIATWYSCGPTVYESAHIGHASCYVKLDIIQRILKS 341
Y C+ VP+ + PH + PTV +G ++C + + R+L+S
Sbjct: 27 YGCLYCGCVPVTVRPPHPQNLGTTLPTVKMIVEVGKSACVLTTQAVTRLLRS 78
>BC030156-1|AAH30156.2| 936|Homo sapiens DIP2B protein protein.
Length = 936
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/64 (25%), Positives = 27/64 (42%)
Frame = +3
Query: 150 LMPNGNPTGIYVYNCIANQRVPIILNDPHIATWYSCGPTVYESAHIGHASCYVKLDIIQR 329
L P G Y C+ +P+ + PH + PTV + A+C + + R
Sbjct: 412 LYPPGIELIAAFYGCLYAGCIPVTVRPPHAQNLTATLPTVRMIVDVSKAACILTSQTLMR 471
Query: 330 ILKS 341
+L+S
Sbjct: 472 LLRS 475
>BC007671-1|AAH07671.2| 936|Homo sapiens DIP2B protein protein.
Length = 936
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/64 (25%), Positives = 27/64 (42%)
Frame = +3
Query: 150 LMPNGNPTGIYVYNCIANQRVPIILNDPHIATWYSCGPTVYESAHIGHASCYVKLDIIQR 329
L P G Y C+ +P+ + PH + PTV + A+C + + R
Sbjct: 412 LYPPGIELIAAFYGCLYAGCIPVTVRPPHAQNLTATLPTVRMIVDVSKAACILTSQTLMR 471
Query: 330 ILKS 341
+L+S
Sbjct: 472 LLRS 475
>AK097369-1|BAC05025.1| 765|Homo sapiens protein ( Homo sapiens
cDNA FLJ40050 fis, clone SYNOV3000184. ).
Length = 765
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/64 (25%), Positives = 27/64 (42%)
Frame = +3
Query: 150 LMPNGNPTGIYVYNCIANQRVPIILNDPHIATWYSCGPTVYESAHIGHASCYVKLDIIQR 329
L P G Y C+ +P+ + PH + PTV + A+C + + R
Sbjct: 241 LYPPGIELIAAFYGCLYAGCIPVTVRPPHAQNLTATLPTVRMIVDVSKAACILTSQTLMR 300
Query: 330 ILKS 341
+L+S
Sbjct: 301 LLRS 304
>AB040896-1|BAA95987.2| 1166|Homo sapiens KIAA1463 protein protein.
Length = 1166
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/64 (25%), Positives = 27/64 (42%)
Frame = +3
Query: 150 LMPNGNPTGIYVYNCIANQRVPIILNDPHIATWYSCGPTVYESAHIGHASCYVKLDIIQR 329
L P G Y C+ +P+ + PH + PTV + A+C + + R
Sbjct: 642 LYPPGIELIAAFYGCLYAGCIPVTVRPPHAQNLTATLPTVRMIVDVSKAACILTSQTLMR 701
Query: 330 ILKS 341
+L+S
Sbjct: 702 LLRS 705
>AL833400-1|CAD38637.1| 930|Homo sapiens hypothetical protein
protein.
Length = 930
Score = 30.3 bits (65), Expect = 3.9
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 458 MLILFSNICEVCFTFEAFLNDFVVYIRNTHSGD 360
M ++ S + + TF + +DF+V I NTHS D
Sbjct: 823 MRLIVSYVYKSLMTFGGYQDDFMVVINNTHSKD 855
>AB095948-1|BAC23124.1| 1449|Homo sapiens KIAA2028 protein protein.
Length = 1449
Score = 30.3 bits (65), Expect = 3.9
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 458 MLILFSNICEVCFTFEAFLNDFVVYIRNTHSGD 360
M ++ S + + TF + +DF+V I NTHS D
Sbjct: 1342 MRLIVSYVYKSLMTFGGYQDDFMVVINNTHSKD 1374
>BC063313-1|AAH63313.1| 1556|Homo sapiens DIP2 disco-interacting
protein 2 homolog C (Drosophila) protein.
Length = 1556
Score = 29.9 bits (64), Expect = 5.1
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +3
Query: 186 YNCIANQRVPIILNDPHIATWYSCGPTVYESAHIGHASCYVKLDIIQRILKS 341
Y C+ VPI + PH + PTV + ++C + +I ++L+S
Sbjct: 1045 YGCLYAGCVPITVRPPHPQNIATTLPTVKMIVEVSRSACLMTTQLICKLLRS 1096
>AL669841-2|CAI14620.1| 1556|Homo sapiens novel protein protein.
Length = 1556
Score = 29.9 bits (64), Expect = 5.1
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +3
Query: 186 YNCIANQRVPIILNDPHIATWYSCGPTVYESAHIGHASCYVKLDIIQRILKS 341
Y C+ VPI + PH + PTV + ++C + +I ++L+S
Sbjct: 1045 YGCLYAGCVPITVRPPHPQNIATTLPTVKMIVEVSRSACLMTTQLICKLLRS 1096
>AL603831-1|CAI40897.1| 1556|Homo sapiens novel protein protein.
Length = 1556
Score = 29.9 bits (64), Expect = 5.1
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +3
Query: 186 YNCIANQRVPIILNDPHIATWYSCGPTVYESAHIGHASCYVKLDIIQRILKS 341
Y C+ VPI + PH + PTV + ++C + +I ++L+S
Sbjct: 1045 YGCLYAGCVPITVRPPHPQNIATTLPTVKMIVEVSRSACLMTTQLICKLLRS 1096
>AL359957-2|CAI16215.1| 1556|Homo sapiens novel protein protein.
Length = 1556
Score = 29.9 bits (64), Expect = 5.1
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +3
Query: 186 YNCIANQRVPIILNDPHIATWYSCGPTVYESAHIGHASCYVKLDIIQRILKS 341
Y C+ VPI + PH + PTV + ++C + +I ++L+S
Sbjct: 1045 YGCLYAGCVPITVRPPHPQNIATTLPTVKMIVEVSRSACLMTTQLICKLLRS 1096
>AL157709-2|CAI39594.1| 1556|Homo sapiens novel protein protein.
Length = 1556
Score = 29.9 bits (64), Expect = 5.1
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +3
Query: 186 YNCIANQRVPIILNDPHIATWYSCGPTVYESAHIGHASCYVKLDIIQRILKS 341
Y C+ VPI + PH + PTV + ++C + +I ++L+S
Sbjct: 1045 YGCLYAGCVPITVRPPHPQNIATTLPTVKMIVEVSRSACLMTTQLICKLLRS 1096
>AB023151-1|BAA76778.2| 1585|Homo sapiens KIAA0934 protein protein.
Length = 1585
Score = 29.9 bits (64), Expect = 5.1
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +3
Query: 186 YNCIANQRVPIILNDPHIATWYSCGPTVYESAHIGHASCYVKLDIIQRILKS 341
Y C+ VPI + PH + PTV + ++C + +I ++L+S
Sbjct: 1074 YGCLYAGCVPITVRPPHPQNIATTLPTVKMIVEVSRSACLMTTQLICKLLRS 1125
>BC032670-1|AAH32670.1| 357|Homo sapiens protein-L-isoaspartate
(D-aspartate) O-methyltransferase domain containing 1
protein.
Length = 357
Score = 29.5 bits (63), Expect = 6.8
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -3
Query: 163 PFGISHFVSL*GFKLHT*DNERTKVKLKTFIFINDTFQAVRTC 35
PFGI+H G +LH+ E K KL++FI +D+F C
Sbjct: 104 PFGINH-----GIELHSDVVEYAKEKLESFIKNSDSFDKFEFC 141
>AK056952-1|BAB71324.1| 357|Homo sapiens protein ( Homo sapiens
cDNA FLJ32390 fis, clone SKMUS1000177, weakly similar to
PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE (EC
2.1.1.77). ).
Length = 357
Score = 29.5 bits (63), Expect = 6.8
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -3
Query: 163 PFGISHFVSL*GFKLHT*DNERTKVKLKTFIFINDTFQAVRTC 35
PFGI+H G +LH+ E K KL++FI +D+F C
Sbjct: 104 PFGINH-----GIELHSDVVEYAKEKLESFIKNSDSFDKFEFC 141
>D80006-1|BAA11501.1| 863|Homo sapiens KIAA0184 protein.
Length = 863
Score = 29.1 bits (62), Expect = 9.0
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +3
Query: 186 YNCIANQRVPIILNDPHIATWYSCGPTVYESAHIGHASCYVKLDIIQRILKS 341
Y C+ VP+ + PH + PTV + ++C + + R+L+S
Sbjct: 352 YGCLYCGCVPVTVRPPHPQNLGTTLPTVKMIVEVSKSACVLTTQAVTRLLRS 403
>AF490768-1|AAM18046.1| 1567|Homo sapiens KIAA0184 protein protein.
Length = 1567
Score = 29.1 bits (62), Expect = 9.0
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +3
Query: 186 YNCIANQRVPIILNDPHIATWYSCGPTVYESAHIGHASCYVKLDIIQRILKS 341
Y C+ VP+ + PH + PTV + ++C + + R+L+S
Sbjct: 1056 YGCLYCGCVPVTVRPPHPQNLGTTLPTVKMIVEVSKSACVLTTQAVTRLLRS 1107
>AB273729-1|BAF69070.1| 1571|Homo sapiens Dip2 protein.
Length = 1571
Score = 29.1 bits (62), Expect = 9.0
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +3
Query: 186 YNCIANQRVPIILNDPHIATWYSCGPTVYESAHIGHASCYVKLDIIQRILKS 341
Y C+ VP+ + PH + PTV + ++C + + R+L+S
Sbjct: 1060 YGCLYCGCVPVTVRPPHPQNLGTTLPTVKMIVEVSKSACVLTTQAVTRLLRS 1111
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,484,650
Number of Sequences: 237096
Number of extensions: 1448320
Number of successful extensions: 2361
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2361
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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