Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0802
         (582 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    24   1.1  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   3.3  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   4.4  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   4.4  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   7.6  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   7.6  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   7.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   7.6  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   7.6  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 110 LFSIMEKPTVTEQPPPYSAAVPPGLQPH 193
           L  I  K T  + PPP ++    GL+PH
Sbjct: 141 LDEIEVKVTGNDAPPPITSFETSGLRPH 168


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -3

Query: 325 WYYNVCGSVAWY 290
           WY+ +CGS   Y
Sbjct: 338 WYFQICGSAFSY 349


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/24 (33%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
 Frame = -3

Query: 373 NANSTCGASSDCDYSW-WYYNVCG 305
           N + TCG    C++ W   +N+ G
Sbjct: 368 NDDGTCGNGYGCEHRWRQIFNMVG 391


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 450 ARQHSIPNGKKRMAHKIPRHVKSSSK 373
           AR   +P+ KK+  H +PR V  +S+
Sbjct: 210 ARYRFMPDIKKKGLHSLPRLVLFTSE 235


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/24 (33%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
 Frame = -3

Query: 373 NANSTCGASSDCDYSW-WYYNVCG 305
           N + TCG    C++ W   +N+ G
Sbjct: 367 NDDGTCGNGYVCEHRWRQIFNMVG 390


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/24 (33%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
 Frame = -3

Query: 373 NANSTCGASSDCDYSW-WYYNVCG 305
           N + TCG    C++ W   +N+ G
Sbjct: 368 NDDGTCGNGYVCEHRWRQIFNMVG 391


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +1

Query: 262 WCSSSTNRLCTKLRSHKHYNTTSY 333
           WCSSS   L T   +   YN   Y
Sbjct: 235 WCSSSQPVLSTTNSTTNCYNNYPY 258


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 140 TEQPPPYSAAVPPGLQP 190
           TE P  YS++ P G  P
Sbjct: 29  TEAPAAYSSSSPSGSSP 45


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 140 TEQPPPYSAAVPPGLQP 190
           TE P  YS++ P G  P
Sbjct: 29  TEAPAAYSSSSPSGSSP 45


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,839
Number of Sequences: 336
Number of extensions: 3491
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)