Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0800
         (538 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...   264   3e-73
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    26   0.24 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    26   0.24 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.7  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   1.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   3.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   3.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   3.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   3.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   3.0  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   6.9  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   9.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.1  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   9.1  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   9.1  
AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone recepto...    21   9.1  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score =  264 bits (647), Expect = 3e-73
 Identities = 132/144 (91%), Positives = 139/144 (96%)
 Frame = +3

Query: 105 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLT 284
           MPEE   Q  +VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLT
Sbjct: 1   MPEE--NQNGDVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLT 58

Query: 285 DPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAG 464
           +PS+LDSGKELYIKIIPNKN+GTLTIIDTGIGMTKADLV+NLGTIAKSGTKAFMEALQAG
Sbjct: 59  NPSRLDSGKELYIKIIPNKNDGTLTIIDTGIGMTKADLVHNLGTIAKSGTKAFMEALQAG 118

Query: 465 ADISMIGQFGVGFYSSYLVADRVT 536
           ADISMIGQFGVGFYS+YLVAD+VT
Sbjct: 119 ADISMIGQFGVGFYSAYLVADKVT 142


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 25.8 bits (54), Expect = 0.24
 Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = -3

Query: 143 FNLRWLCLHFFRHFLY-CFLFNSH-XMTRGFLTHVFQSAKYRTLVSVL 6
           F  R+LCL F+ +F Y  +++ ++     G   ++ Q A Y   +++L
Sbjct: 75  FMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGYTGFLAML 122


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 25.8 bits (54), Expect = 0.24
 Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = -3

Query: 143 FNLRWLCLHFFRHFLY-CFLFNSH-XMTRGFLTHVFQSAKYRTLVSVL 6
           F  R+LCL F+ +F Y  +++ ++     G   ++ Q A Y   +++L
Sbjct: 31  FMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGYTGFLAML 78


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 405 CSPNRPWSYQYRYR 364
           C P RPW   Y +R
Sbjct: 522 CDPYRPWQTVYNHR 535


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +1

Query: 259 TKSGMNLSRIRQNSIVAKSCTSRSFPTRTRALL 357
           ++SG+N      N++ A +   + +PT T  +L
Sbjct: 368 SQSGINYKDTNDNNVSAVTTQHQGYPTNTVTIL 400


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 470 HQHDWTVRCWLLLQ 511
           HQH W    WLL Q
Sbjct: 215 HQHAWIWLVWLLSQ 228


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 470 HQHDWTVRCWLLLQ 511
           HQH W    WLL Q
Sbjct: 461 HQHAWIWLLWLLSQ 474


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 470 HQHDWTVRCWLLLQ 511
           HQH W    WLL Q
Sbjct: 461 HQHAWIWLLWLLSQ 474


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 470 HQHDWTVRCWLLLQ 511
           HQH W    WLL Q
Sbjct: 448 HQHAWIWLVWLLSQ 461


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 470 HQHDWTVRCWLLLQ 511
           HQH W    WLL Q
Sbjct: 448 HQHAWIWLVWLLSQ 461


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 470 HQHDWTVRCWLLLQ 511
           HQH W    WLL Q
Sbjct: 461 HQHAWIWLLWLLSQ 474


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 470 HQHDWTVRCWLLLQ 511
           HQH W    WLL Q
Sbjct: 461 HQHAWIWLLWLLSQ 474


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = -2

Query: 405 CSPNRPWSYQYRYR 364
           C P  PW   Y YR
Sbjct: 481 CDPYTPWHTFYDYR 494


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +2

Query: 314 AVHQDHSQQERGHSYDHRYRYWYDQG 391
           A H D + +++  +     +YW D+G
Sbjct: 226 ASHLDQTDEQKTLNVAAGIQYWLDEG 251


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -3

Query: 449 LHESFSTRFRDGSQIVHQIGLGHTNTGIDDRKS 351
           LHE  +T   D  Q V     G+   G DD +S
Sbjct: 806 LHEDNTTLVWDNEQQVPFAYRGNQWVGFDDERS 838


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +2

Query: 314 AVHQDHSQQERGHSYDHRYRYWYDQG 391
           A H D + +++  +     +YW D+G
Sbjct: 227 ASHLDQTDEQKTLNVAAGIQYWLDEG 252


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +2

Query: 314 AVHQDHSQQERGHSYDHRYRYWYDQG 391
           A H D + +++  +     +YW D+G
Sbjct: 227 ASHLDQTDEQKTLNVAAGIQYWLDEG 252


>AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone receptor
           (isoform B) protein.
          Length = 96

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 354 LTIIDTGIGMTKADLVNNLGTIAKSGTKA 440
           LTII  G G+    ++ +   +AKS T +
Sbjct: 58  LTIIQNGYGLPGHTIIASNHHLAKSDTSS 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,316
Number of Sequences: 336
Number of extensions: 2668
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)