BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= P5PG0797 (509 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g16785.1 68416.m02143 phospholipase D zeta1 / PLDzeta1 (PLDP1... 27 5.5 At3g14480.1 68416.m01834 glycine/proline-rich protein contains 1... 27 7.3 >At3g16785.1 68416.m02143 phospholipase D zeta1 / PLDzeta1 (PLDP1) identical to phospholipase D zeta1 [Arabidopsis thaliana] GI:15723315, SP|Q9LRZ5 Phospholipase D p1 (EC 3.1.4.4) (AtPLDp1) (Phospholipase D1 PHOX and PX containing domain) (Phospholipase D zeta 1) (PLDzeta1) {Arabidopsis thaliana}; supported by cDNA gi:15723314; non-consensus splice site (GC) at the beginning of first intron. Length = 1096 Score = 27.5 bits (58), Expect = 5.5 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +1 Query: 46 HEILRFPRYPRHVGGRRLRWLHQERMV 126 HE +R RYP H W H E++V Sbjct: 460 HENVRVLRYPDHFSSGVYLWSHHEKLV 486 >At3g14480.1 68416.m01834 glycine/proline-rich protein contains 1 predicted transmembrane domain; Length = 175 Score = 27.1 bits (57), Expect = 7.3 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = -2 Query: 214 QTTVSMTTIAQTAMISSGKAAVARAVSWTRPSALDVASGGGDHQHGEGNEG 62 Q S++ +I +G A + + T SA SGGG H HG G G Sbjct: 107 QRPKSVSRTKDRELIDTGTAMLVASSLLTSGSASS-CSGGGSHGHGCGGGG 156 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,483,767 Number of Sequences: 28952 Number of extensions: 102021 Number of successful extensions: 318 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 315 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 318 length of database: 12,070,560 effective HSP length: 76 effective length of database: 9,870,208 effective search space used: 917929344 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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