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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0797
         (509 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g16785.1 68416.m02143 phospholipase D zeta1 / PLDzeta1 (PLDP1...    27   5.5  
At3g14480.1 68416.m01834 glycine/proline-rich protein contains 1...    27   7.3  

>At3g16785.1 68416.m02143 phospholipase D zeta1 / PLDzeta1 (PLDP1)
           identical to phospholipase D zeta1 [Arabidopsis
           thaliana] GI:15723315, SP|Q9LRZ5 Phospholipase D p1 (EC
           3.1.4.4) (AtPLDp1) (Phospholipase D1 PHOX and PX
           containing domain) (Phospholipase D zeta 1) (PLDzeta1)
           {Arabidopsis thaliana}; supported by cDNA gi:15723314;
           non-consensus splice site (GC) at the beginning of first
           intron.
          Length = 1096

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 46  HEILRFPRYPRHVGGRRLRWLHQERMV 126
           HE +R  RYP H       W H E++V
Sbjct: 460 HENVRVLRYPDHFSSGVYLWSHHEKLV 486


>At3g14480.1 68416.m01834 glycine/proline-rich protein contains 1
           predicted transmembrane domain;
          Length = 175

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = -2

Query: 214 QTTVSMTTIAQTAMISSGKAAVARAVSWTRPSALDVASGGGDHQHGEGNEG 62
           Q   S++      +I +G A +  +   T  SA    SGGG H HG G  G
Sbjct: 107 QRPKSVSRTKDRELIDTGTAMLVASSLLTSGSASS-CSGGGSHGHGCGGGG 156


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,483,767
Number of Sequences: 28952
Number of extensions: 102021
Number of successful extensions: 318
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 318
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 917929344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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