Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0796
         (417 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   6.4  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   6.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   8.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   8.4  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 9/39 (23%), Positives = 17/39 (43%)
 Frame = +1

Query: 265 IAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHR 381
           +  + G+   F +     +VFA++  F G   +    HR
Sbjct: 443 VMNINGVLFVFLTNMTFQNVFAVINVFSGELPVFLQEHR 481


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 9/39 (23%), Positives = 17/39 (43%)
 Frame = +1

Query: 265 IAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHR 381
           +  + G+   F +     +VFA++  F G   +    HR
Sbjct: 443 VMNINGVLFVFLTNMTFQNVFAVINVFSGELPVFLQEHR 481


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 332 LCYSSLGTLVLQLELI 379
           +CYS++GT+    ELI
Sbjct: 300 VCYSTIGTVSKAGELI 315


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 6/15 (40%), Positives = 7/15 (46%)
 Frame = +3

Query: 195 CTPGLAHQTQNCSDE 239
           C PG  H    C D+
Sbjct: 264 CRPGACHNNGTCLDK 278


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,579
Number of Sequences: 336
Number of extensions: 1804
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)