BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0796
(417 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC004936-1|AAH04936.1| 132|Homo sapiens SCD5 protein protein. 65 8e-11
AF389338-1|AAP31443.1| 330|Homo sapiens acyl-CoA-desaturase pro... 65 8e-11
AC073413-1|AAY40977.1| 256|Homo sapiens unknown protein. 65 8e-11
Y13647-1|CAA73998.1| 359|Homo sapiens stearoyl CoA desaturase p... 64 1e-10
S70284-1|AAB30631.1| 237|Homo sapiens stearoyl-CoA desaturase p... 64 1e-10
BC062303-1|AAH62303.1| 359|Homo sapiens stearoyl-CoA desaturase... 64 1e-10
BC005807-1|AAH05807.1| 355|Homo sapiens SCD protein protein. 64 1e-10
AL139819-4|CAH72824.1| 359|Homo sapiens stearoyl-CoA desaturase... 64 1e-10
AL139819-3|CAH72823.1| 242|Homo sapiens stearoyl-CoA desaturase... 64 1e-10
AK222862-1|BAD96582.1| 359|Homo sapiens stearoyl-CoA desaturase... 64 1e-10
AF097514-1|AAD29870.1| 359|Homo sapiens stearoyl-CoA desaturase... 64 1e-10
AB208982-1|BAD92219.1| 366|Homo sapiens stearoyl-CoA desaturase... 64 1e-10
AB032261-1|BAA93510.1| 359|Homo sapiens stearoyl-CoA desaturase... 64 1e-10
AK024685-1|BAB14961.1| 256|Homo sapiens protein ( Homo sapiens ... 63 4e-10
>BC004936-1|AAH04936.1| 132|Homo sapiens SCD5 protein protein.
Length = 132
Score = 65.3 bits (152), Expect = 8e-11
Identities = 33/73 (45%), Positives = 41/73 (56%)
Frame = +1
Query: 199 PQASPIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAH 378
P A + IV NV+ S LH+ +Y L L AK T ++A F L G+TAGAH
Sbjct: 36 PGARGQRQNIVWRNVVLMSLLHLGAVYSLVL-IPKAKPLTLLWAYFCFLLAALGVTAGAH 94
Query: 379 RLWSHNGYKVKLP 417
RLWSH Y+ KLP
Sbjct: 95 RLWSHRSYRAKLP 107
>AF389338-1|AAP31443.1| 330|Homo sapiens acyl-CoA-desaturase
protein.
Length = 330
Score = 65.3 bits (152), Expect = 8e-11
Identities = 33/73 (45%), Positives = 41/73 (56%)
Frame = +1
Query: 199 PQASPIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAH 378
P A + IV NV+ S LH+ +Y L L AK T ++A F L G+TAGAH
Sbjct: 36 PGARGQRQNIVWRNVVLMSLLHLGAVYSLVL-IPKAKPLTLLWAYFCFLLAALGVTAGAH 94
Query: 379 RLWSHNGYKVKLP 417
RLWSH Y+ KLP
Sbjct: 95 RLWSHRSYRAKLP 107
>AC073413-1|AAY40977.1| 256|Homo sapiens unknown protein.
Length = 256
Score = 65.3 bits (152), Expect = 8e-11
Identities = 33/73 (45%), Positives = 41/73 (56%)
Frame = +1
Query: 199 PQASPIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAH 378
P A + IV NV+ S LH+ +Y L L AK T ++A F L G+TAGAH
Sbjct: 36 PGARGQRQNIVWRNVVLMSLLHLGAVYSLVL-IPKAKPLTLLWAYFCFLLAALGVTAGAH 94
Query: 379 RLWSHNGYKVKLP 417
RLWSH Y+ KLP
Sbjct: 95 RLWSHRSYRAKLP 107
>Y13647-1|CAA73998.1| 359|Homo sapiens stearoyl CoA desaturase
protein.
Length = 359
Score = 64.5 bits (150), Expect = 1e-10
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +1
Query: 217 KHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWSHN 396
K + V N+I S LH+ LYG+ L T K T ++ + +F+ GITAGAHRLWSH
Sbjct: 68 KVEYVWRNIILMSLLHLGALYGITLIPT-CKFYTWLWGVFYYFVSALGITAGAHRLWSHR 126
Query: 397 GYKVKLP 417
YK +LP
Sbjct: 127 SYKARLP 133
>S70284-1|AAB30631.1| 237|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 237
Score = 64.5 bits (150), Expect = 1e-10
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +1
Query: 217 KHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWSHN 396
K + V N+I S LH+ LYG+ L T K T ++ + +F+ GITAGAHRLWSH
Sbjct: 66 KVEYVWRNIILMSLLHLGALYGITLIPT-CKFYTWLWGVFYYFVSALGITAGAHRLWSHR 124
Query: 397 GYKVKLP 417
YK +LP
Sbjct: 125 SYKARLP 131
>BC062303-1|AAH62303.1| 359|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 359
Score = 64.5 bits (150), Expect = 1e-10
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +1
Query: 217 KHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWSHN 396
K + V N+I S LH+ LYG+ L T K T ++ + +F+ GITAGAHRLWSH
Sbjct: 68 KVEYVWRNIILMSLLHLGALYGITLIPT-CKFYTWLWGVFYYFVSALGITAGAHRLWSHR 126
Query: 397 GYKVKLP 417
YK +LP
Sbjct: 127 SYKARLP 133
>BC005807-1|AAH05807.1| 355|Homo sapiens SCD protein protein.
Length = 355
Score = 64.5 bits (150), Expect = 1e-10
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +1
Query: 217 KHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWSHN 396
K + V N+I S LH+ LYG+ L T K T ++ + +F+ GITAGAHRLWSH
Sbjct: 68 KVEYVWRNIILMSLLHLGALYGITLIPT-CKFYTWLWGVFYYFVSALGITAGAHRLWSHR 126
Query: 397 GYKVKLP 417
YK +LP
Sbjct: 127 SYKARLP 133
>AL139819-4|CAH72824.1| 359|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 359
Score = 64.5 bits (150), Expect = 1e-10
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +1
Query: 217 KHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWSHN 396
K + V N+I S LH+ LYG+ L T K T ++ + +F+ GITAGAHRLWSH
Sbjct: 68 KVEYVWRNIILMSLLHLGALYGITLIPT-CKFYTWLWGVFYYFVSALGITAGAHRLWSHR 126
Query: 397 GYKVKLP 417
YK +LP
Sbjct: 127 SYKARLP 133
>AL139819-3|CAH72823.1| 242|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 242
Score = 64.5 bits (150), Expect = 1e-10
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +1
Query: 217 KHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWSHN 396
K + V N+I S LH+ LYG+ L T K T ++ + +F+ GITAGAHRLWSH
Sbjct: 68 KVEYVWRNIILMSLLHLGALYGITLIPT-CKFYTWLWGVFYYFVSALGITAGAHRLWSHR 126
Query: 397 GYKVKLP 417
YK +LP
Sbjct: 127 SYKARLP 133
>AK222862-1|BAD96582.1| 359|Homo sapiens stearoyl-CoA desaturase
variant protein.
Length = 359
Score = 64.5 bits (150), Expect = 1e-10
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +1
Query: 217 KHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWSHN 396
K + V N+I S LH+ LYG+ L T K T ++ + +F+ GITAGAHRLWSH
Sbjct: 68 KVEYVWRNIILMSLLHLGALYGITLIPT-CKFYTWLWGVFYYFVSALGITAGAHRLWSHR 126
Query: 397 GYKVKLP 417
YK +LP
Sbjct: 127 SYKARLP 133
>AF097514-1|AAD29870.1| 359|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 359
Score = 64.5 bits (150), Expect = 1e-10
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +1
Query: 217 KHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWSHN 396
K + V N+I S LH+ LYG+ L T K T ++ + +F+ GITAGAHRLWSH
Sbjct: 68 KVEYVWRNIILMSLLHLGALYGITLIPT-CKFYTWLWGVFYYFVSALGITAGAHRLWSHR 126
Query: 397 GYKVKLP 417
YK +LP
Sbjct: 127 SYKARLP 133
>AB208982-1|BAD92219.1| 366|Homo sapiens stearoyl-CoA desaturase
variant protein.
Length = 366
Score = 64.5 bits (150), Expect = 1e-10
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +1
Query: 217 KHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWSHN 396
K + V N+I S LH+ LYG+ L T K T ++ + +F+ GITAGAHRLWSH
Sbjct: 75 KVEYVWRNIILMSLLHLGALYGITLIPT-CKFYTWLWGVFYYFVSALGITAGAHRLWSHR 133
Query: 397 GYKVKLP 417
YK +LP
Sbjct: 134 SYKARLP 140
>AB032261-1|BAA93510.1| 359|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 359
Score = 64.5 bits (150), Expect = 1e-10
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +1
Query: 217 KHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWSHN 396
K + V N+I S LH+ LYG+ L T K T ++ + +F+ GITAGAHRLWSH
Sbjct: 68 KVEYVWRNIILMSLLHLGALYGITLIPT-CKFYTWLWGVFYYFVSALGITAGAHRLWSHR 126
Query: 397 GYKVKLP 417
YK +LP
Sbjct: 127 SYKARLP 133
>AK024685-1|BAB14961.1| 256|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21032 fis, clone CAE07365. ).
Length = 256
Score = 62.9 bits (146), Expect = 4e-10
Identities = 32/73 (43%), Positives = 40/73 (54%)
Frame = +1
Query: 199 PQASPIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAH 378
P A + IV NV+ S LH+ +Y L L AK T ++A L G+TAGAH
Sbjct: 36 PGARGQRQNIVWRNVVLMSLLHLGAVYSLVL-IPKAKPLTLLWAYFCLLLAALGVTAGAH 94
Query: 379 RLWSHNGYKVKLP 417
RLWSH Y+ KLP
Sbjct: 95 RLWSHRSYRAKLP 107
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,866,892
Number of Sequences: 237096
Number of extensions: 989570
Number of successful extensions: 5707
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5693
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -