Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0796
         (417 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   1.0  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   5.6  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   7.4  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 326 LLLCYSSLGTLVLQLELIVCGL 391
           +LLCY     LVL+   IVCG+
Sbjct: 702 ILLCYLVTFALVLRPTDIVCGI 723


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 205 ASPIKHKIVVMNVIRFSYLHIAGLY 279
           A+   + +V++ V+R  YLH A  Y
Sbjct: 58  ATVFGNTLVILAVVRERYLHTATNY 82


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 299 PQQNWLHRFLLLCYSSLGTLV 361
           P   W+H +L L  + L TL+
Sbjct: 538 PIHTWIHPWLPLLRNRLDTLI 558


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,997
Number of Sequences: 438
Number of extensions: 1832
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)