Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0795
         (531 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,437...    31   0.76 
03_06_0643 + 35248597-35250585,35250663-35250773,35250867-352509...    28   4.1  
11_06_0681 + 26248299-26248838,26249089-26249222,26250245-262506...    27   7.1  
07_01_0998 - 8414492-8415175                                           27   9.4  
05_04_0149 - 18441561-18442082,18442723-18442861,18443295-184433...    27   9.4  

>01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,
            4378900-4378970,4379038-4379144,4379241-4379711,
            4379791-4379976,4380132-4380425,4380820-4381434,
            4382219-4382615,4382768-4382850,4383397-4383567,
            4384046-4384243,4384754-4385314,4385401-4385460,
            4385553-4385869,4385980-4386403,4386539-4387006,
            4387093-4387209,4387306-4387427,4387506-4388247,
            4388453-4388485,4388625-4388879,4388975-4389160,
            4390115-4390453,4391293-4392045
          Length = 3017

 Score = 30.7 bits (66), Expect = 0.76
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = +3

Query: 324  TWLGFYKKTSAEDELIHTIKHCILFIQRYDYIKAEQLLHVALRQAQQMQHQLAI 485
            +WL  Y K    DEL+  + H +   +    I A Q  H A  +A  +  Q+ I
Sbjct: 2792 SWLSRYDKERRNDELLEAMHHLVEMAEVLSTIDAGQRTHRACARASLLSLQIRI 2845


>03_06_0643 +
           35248597-35250585,35250663-35250773,35250867-35250971,
           35252215-35252304
          Length = 764

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 399 IQRYDYIKAEQLLHVALRQAQQMQHQLAITYIYDVMANL 515
           I+RYDY+  + L  V +  +   +HQ A+  I D+   L
Sbjct: 563 IERYDYVSLQCLRLVEIGASSDEKHQHALKLIRDIRRTL 601


>11_06_0681 +
           26248299-26248838,26249089-26249222,26250245-26250630,
           26250781-26251283,26251335-26251538
          Length = 588

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 442 WLLDKPNRCSIS*Q*PIFMMLWQTWHLK 525
           W+LD+        Q    M+LW+TWH++
Sbjct: 394 WILDQLQLVPGEEQPKFLMVLWRTWHVR 421


>07_01_0998 - 8414492-8415175
          Length = 227

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -3

Query: 469 CICWACLRATCNSCSALM*SYLCMKRIQCLMVCISSSSALVFL 341
           C C+ C  A C+ C     SY   + I    VC+   +A+V L
Sbjct: 8   CGCYECYDACCDRCCCGCVSYDTRETIFYCAVCLLLVAAVVLL 50


>05_04_0149 -
           18441561-18442082,18442723-18442861,18443295-18443352,
           18443630-18443664,18444528-18444886,18445304-18445450,
           18445849-18447954,18448300-18448494,18448629-18448709,
           18448758-18448874,18449281-18449370,18449466-18449552,
           18450293-18450315,18450675-18450804
          Length = 1362

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -3

Query: 385 CLMVCISSSSALVFL*KPSHVNNENPTAHGTLPIFC*GSLAKFF 254
           C+ V +++S  +  +  P +    NP A G LP+   G L K F
Sbjct: 611 CMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHKNF 654


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,124,000
Number of Sequences: 37544
Number of extensions: 225251
Number of successful extensions: 453
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1178343540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)