Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0795
         (531 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC112107-1|AAI12108.1|  501|Homo sapiens tetratricopeptide repea...    51   2e-06
BC105128-1|AAI05129.1|  501|Homo sapiens tetratricopeptide repea...    51   2e-06
BC073796-1|AAH73796.1|  384|Homo sapiens TTC19 protein protein.        51   2e-06
BC011698-1|AAH11698.2|  382|Homo sapiens TTC19 protein protein.        51   2e-06
AK000350-1|BAA91103.1|  273|Homo sapiens protein ( Homo sapiens ...    42   0.001

>BC112107-1|AAI12108.1|  501|Homo sapiens tetratricopeptide repeat
           domain 19 protein.
          Length = 501

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 28/58 (48%), Positives = 37/58 (63%)
 Frame = +3

Query: 354 AEDELIHTIKHCILFIQRYDYIKAEQLLHVALRQAQQMQHQLAITYIYDVMANLALER 527
           AE E+I  +K   L I + +  +AE +LH ALR A Q  ++ AITY YD+MANLA  R
Sbjct: 213 AEAEIIQLLKRAKLSIMKDEPEEAELILHDALRLAYQTDNKKAITYTYDLMANLAFIR 270


>BC105128-1|AAI05129.1|  501|Homo sapiens tetratricopeptide repeat
           domain 19 protein.
          Length = 501

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 28/58 (48%), Positives = 37/58 (63%)
 Frame = +3

Query: 354 AEDELIHTIKHCILFIQRYDYIKAEQLLHVALRQAQQMQHQLAITYIYDVMANLALER 527
           AE E+I  +K   L I + +  +AE +LH ALR A Q  ++ AITY YD+MANLA  R
Sbjct: 213 AEAEIIQLLKRAKLSIMKDEPEEAELILHDALRLAYQTDNKKAITYTYDLMANLAFIR 270


>BC073796-1|AAH73796.1|  384|Homo sapiens TTC19 protein protein.
          Length = 384

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 28/58 (48%), Positives = 37/58 (63%)
 Frame = +3

Query: 354 AEDELIHTIKHCILFIQRYDYIKAEQLLHVALRQAQQMQHQLAITYIYDVMANLALER 527
           AE E+I  +K   L I + +  +AE +LH ALR A Q  ++ AITY YD+MANLA  R
Sbjct: 96  AEAEIIQLLKRAKLSIMKDEPEEAELILHDALRLAYQTDNKKAITYTYDLMANLAFIR 153


>BC011698-1|AAH11698.2|  382|Homo sapiens TTC19 protein protein.
          Length = 382

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 28/58 (48%), Positives = 37/58 (63%)
 Frame = +3

Query: 354 AEDELIHTIKHCILFIQRYDYIKAEQLLHVALRQAQQMQHQLAITYIYDVMANLALER 527
           AE E+I  +K   L I + +  +AE +LH ALR A Q  ++ AITY YD+MANLA  R
Sbjct: 94  AEAEIIQLLKRAKLSIMKDEPEEAELILHDALRLAYQTDNKKAITYTYDLMANLAFIR 151


>AK000350-1|BAA91103.1|  273|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20343 fis, clone HEP13649. ).
          Length = 273

 Score = 42.3 bits (95), Expect = 0.001
 Identities = 21/36 (58%), Positives = 26/36 (72%)
 Frame = +3

Query: 420 KAEQLLHVALRQAQQMQHQLAITYIYDVMANLALER 527
           +AE +LH ALR A Q  ++ AITY YD+MANLA  R
Sbjct: 7   EAELILHDALRLAYQTDNKKAITYTYDLMANLAFIR 42


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,227,327
Number of Sequences: 237096
Number of extensions: 1346167
Number of successful extensions: 2479
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2477
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)