Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0795
         (531 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   3.4  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   4.5  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   7.9  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   7.9  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 487 PIFMMLWQTWHLKEN 531
           P +++ W+ W LK N
Sbjct: 259 PTYLIKWKNWDLKYN 273


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 13/51 (25%), Positives = 22/51 (43%)
 Frame = -3

Query: 232 VDLTKRTNKFLYLTDMLELKNAYYITLMFKIYKKFENVIQLIFQNLNLKLV 80
           +D   RTN+   +  M    N Y + L  K+ K   N     F  +N +++
Sbjct: 522 MDRMDRTNRMDRMNRMNRQMNEYMMALSMKLQKFINN--DYNFNEVNFRIL 570


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 378 IKHCILFIQRYDYIKAE 428
           IKH ++++Q+Y Y+  E
Sbjct: 528 IKHDMVYLQKYFYLFME 544


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 378 IKHCILFIQRYDYIKAE 428
           IKH ++++Q+Y Y+  E
Sbjct: 528 IKHDMVYLQKYFYLFME 544


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,804
Number of Sequences: 438
Number of extensions: 2908
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)