Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0794
         (434 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025716-9|AAK39619.1|  469|Caenorhabditis elegans Hypothetical ...    31   0.48 
Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical pr...    29   1.1  
Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z35640-1|CAA84705.1|  307|Caenorhabditis elegans Hypothetical pr...    28   2.5  
Z74035-1|CAA98480.1|  204|Caenorhabditis elegans Hypothetical pr...    27   7.8  
Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical pr...    27   7.8  
Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical pr...    27   7.8  
AL132877-14|CAD92388.1|  439|Caenorhabditis elegans Hypothetical...    27   7.8  
AL132877-13|CAC70110.4|  478|Caenorhabditis elegans Hypothetical...    27   7.8  

>AC025716-9|AAK39619.1|  469|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.8 protein.
          Length = 469

 Score = 30.7 bits (66), Expect = 0.48
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +3

Query: 93  ISNMNTISKTARIVRKRPFRVSIEGNIGSGKSTCIKFFNKFHNVEHHTE 239
           + N+N +++   I R+    +   G++  GKST +K F+  H V+   E
Sbjct: 24  VDNLNPLTEEV-ISRQATINIGTIGHVAHGKSTLVKAFSGVHTVKFKRE 71


>Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical protein
            F22E10.2 protein.
          Length = 1324

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +3

Query: 153  VSIEGNIGSGKSTCIKFFNKFHNV 224
            V++ G  GSGKSTCI    +F++V
Sbjct: 1114 VALVGPSGSGKSTCIGMLERFYDV 1137


>Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical protein
            F22E10.1 protein.
          Length = 1318

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 153  VSIEGNIGSGKSTCIKFFNKFHNV 224
            V++ G  G+GKSTCI    +F++V
Sbjct: 1108 VALVGPSGTGKSTCIAMLERFYDV 1131


>Z35640-1|CAA84705.1|  307|Caenorhabditis elegans Hypothetical
           protein F43D9.2 protein.
          Length = 307

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = +3

Query: 114 SKTARIVRKRPFRVSIEGNIGSGKSTCIKFFNKFHNVEHHTE 239
           S T    +KR F+V I GN   GK TC+ F         HTE
Sbjct: 90  SSTKTYKQKRTFKVIIVGNAAVGK-TCLSFRFCCGRFPEHTE 130


>Z74035-1|CAA98480.1|  204|Caenorhabditis elegans Hypothetical
           protein F47G9.1 protein.
          Length = 204

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 204 RILYMLIFQILCFLQLTL*KVFCVR 130
           R+LY+ IF +LC L L + +V  +R
Sbjct: 170 RVLYLSIFSMLCLLGLAIWQVLFLR 194


>Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical
           protein T21E8.3 protein.
          Length = 1243

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +3

Query: 153 VSIEGNIGSGKSTCIKFFNKFHNVEHHT 236
           +++ G  GSGKST ++    F+N++  T
Sbjct: 411 IALVGASGSGKSTIVQLLLHFYNIQSGT 438


>Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical
           protein T21E8.3 protein.
          Length = 1243

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +3

Query: 153 VSIEGNIGSGKSTCIKFFNKFHNVEHHT 236
           +++ G  GSGKST ++    F+N++  T
Sbjct: 411 IALVGASGSGKSTIVQLLLHFYNIQSGT 438


>AL132877-14|CAD92388.1|  439|Caenorhabditis elegans Hypothetical
           protein Y105E8B.8b protein.
          Length = 439

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 59  GLRVKLKINFTNIQYEHY*QDSS 127
           G+   LKI F+++ + HY QDSS
Sbjct: 361 GMGTALKILFSDLPHSHYKQDSS 383


>AL132877-13|CAC70110.4|  478|Caenorhabditis elegans Hypothetical
           protein Y105E8B.8a protein.
          Length = 478

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 59  GLRVKLKINFTNIQYEHY*QDSS 127
           G+   LKI F+++ + HY QDSS
Sbjct: 400 GMGTALKILFSDLPHSHYKQDSS 422


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,927,022
Number of Sequences: 27780
Number of extensions: 169504
Number of successful extensions: 374
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 374
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)