Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0794
         (434 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    25   0.48 
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           25   0.48 
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   1.1  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    23   1.1  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   1.1  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   1.1  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   1.1  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    23   1.5  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   3.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   4.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   4.5  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   4.5  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    21   4.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.9  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   7.9  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.48
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 287 NVQWIRRNGSLHSXHYVHL 343
           +VQW R N +  S HY+H+
Sbjct: 509 SVQWPRLNPNEKSLHYLHI 527


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.48
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 287 NVQWIRRNGSLHSXHYVHL 343
           +VQW R N +  S HY+H+
Sbjct: 509 SVQWPRLNPNEKSLHYLHI 527


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = -3

Query: 189 LIFQILCFLQLTL*KVFCVRYE 124
           LIF ILC L L L  V  VR E
Sbjct: 31  LIFTILCILTLALTLVTLVRAE 52


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = -3

Query: 189 LIFQILCFLQLTL*KVFCVRYE 124
           LIF ILC L L L  V  VR E
Sbjct: 31  LIFTILCILTLALTLVTLVRAE 52


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = -3

Query: 189 LIFQILCFLQLTL*KVFCVRYE 124
           LIF ILC L L L  V  VR E
Sbjct: 31  LIFTILCILTLALTLVTLVRAE 52


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = -3

Query: 189 LIFQILCFLQLTL*KVFCVRYE 124
           LIF ILC L L L  V  VR E
Sbjct: 31  LIFTILCILTLALTLVTLVRAE 52


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 205 STSFIMLNTILSLYMN 252
           STSFI++N  + LY N
Sbjct: 13  STSFILINYFIFLYFN 28


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 143 SFAYDTSCLANSVHIG 96
           ++ YDT C  N VH G
Sbjct: 500 TYTYDTICQLNIVHYG 515


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 219 NVEHHTEPLHEWR 257
           N+EH    +HEW+
Sbjct: 30  NLEHSMNVIHEWK 42


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 222 VEHHTEPLHEWRDVSGHNL 278
           V +HT   HEW  +S  N+
Sbjct: 121 VPNHTSDQHEWFQLSLKNI 139


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 175 PMFPSIDTLKGLLRTIRAVL 116
           P FPS+D + GL    +A L
Sbjct: 211 PKFPSMDNINGLSTESKADL 230


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 222 VEHHTEPLHEWRDVSGHNL 278
           V +HT   HEW  +S  N+
Sbjct: 121 VPNHTSDQHEWFQLSLKNI 139


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 180 GKSTCIKFFNKFHNVEHHTEPLHEWRDV 263
           GK  C K   K H  + H E   E+R V
Sbjct: 12  GKVLCSKASLKRHVADKHAERQEEYRCV 39


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +1

Query: 241  LYMNGEMLVATTYLA*CTVDQKKWIFTFXALCTSXVGL 354
            +++NGE +V +   A   V++ + IF    +    +GL
Sbjct: 1529 VFVNGEKIVVSRNKAYQKVEENEIIFEIYKMGDRFIGL 1566


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 11/47 (23%), Positives = 19/47 (40%)
 Frame = +3

Query: 180 GKSTCIKFFNKFHNVEHHTEPLHEWRDVSGHNLLSLMYSGSEEMDLY 320
           GK+   K   K H  + H +PL+       H +   + S +    +Y
Sbjct: 378 GKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNHKSIY 424


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,805
Number of Sequences: 438
Number of extensions: 2034
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)