Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0793
(584 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 264 8e-70
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 264 8e-70
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 263 2e-69
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 258 5e-68
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 255 6e-67
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 244 9e-64
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 236 3e-61
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 233 2e-60
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 223 3e-57
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 222 4e-57
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 221 7e-57
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 217 2e-55
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 217 2e-55
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 210 1e-53
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 210 2e-53
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 200 2e-50
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 196 3e-49
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 194 2e-48
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 193 3e-48
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 185 6e-46
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 178 9e-44
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 177 2e-43
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 169 6e-41
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 165 5e-40
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 165 9e-40
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 156 4e-37
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 151 9e-36
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 149 6e-35
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 148 8e-35
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 146 3e-34
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 145 6e-34
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 143 2e-33
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 143 3e-33
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 141 1e-32
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 139 4e-32
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 139 4e-32
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 138 7e-32
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 138 1e-31
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 135 8e-31
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 134 1e-30
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 133 3e-30
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 133 3e-30
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 131 1e-29
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 131 1e-29
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 131 1e-29
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 130 2e-29
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 130 2e-29
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 130 2e-29
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 130 2e-29
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 127 2e-28
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 126 3e-28
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 125 7e-28
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 124 2e-27
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 123 4e-27
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 121 1e-26
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 120 3e-26
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 120 3e-26
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 119 4e-26
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 118 1e-25
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 118 1e-25
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 118 1e-25
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 117 2e-25
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 117 2e-25
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 116 3e-25
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 116 3e-25
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 114 1e-24
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 114 1e-24
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 114 1e-24
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 113 3e-24
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 113 3e-24
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 113 4e-24
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 109 4e-23
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 109 5e-23
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 108 8e-23
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 107 1e-22
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 107 2e-22
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 101 9e-21
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 100 5e-20
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 97 3e-19
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 96 6e-19
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 94 3e-18
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 89 7e-17
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 85 1e-15
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 84 2e-15
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 80 4e-14
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 78 1e-13
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 78 1e-13
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 77 3e-13
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 75 9e-13
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 74 3e-12
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 72 1e-11
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 69 8e-11
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 69 8e-11
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 63 4e-09
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 62 7e-09
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 62 1e-08
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 58 2e-07
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 57 4e-07
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 55 1e-06
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 54 2e-06
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 53 6e-06
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 51 2e-05
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 48 2e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 2e-04
UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1; Ca... 47 3e-04
UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal ... 47 4e-04
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 46 7e-04
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 46 9e-04
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 43 0.006
UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit... 40 0.043
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 39 0.076
UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3; Py... 39 0.100
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 37 0.30
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 36 0.53
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 1.6
UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2; Crypto... 33 6.6
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 6.6
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 32 8.7
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 264 bits (648), Expect = 8e-70
Identities = 126/194 (64%), Positives = 149/194 (76%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHP
Sbjct: 182 PLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 241
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
EVYILILPGFG+ISHI++ GKKE F FIV AHH+FTVG+D+DT
Sbjct: 242 EVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDT 301
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 541
RAYFTSAT+IIA+PTG+K+F LAT+HG+ + ++ +L LGF+FLFTVGGLTG++LANS
Sbjct: 302 RAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFTVGGLTGIVLANS 361
Query: 542 SIDITLHDTYYVVA 583
S+DI LHDTYYVVA
Sbjct: 362 SLDIVLHDTYYVVA 375
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 264 bits (648), Expect = 8e-70
Identities = 127/194 (65%), Positives = 147/194 (75%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLFV AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHP
Sbjct: 182 PLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 241
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
EVYILILPGFGIISH+++ GKKE F FIV AHH+FTVG+D+DT
Sbjct: 242 EVYILILPGFGIISHVVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDT 301
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 541
RAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLFTVGGLTG++LANS
Sbjct: 302 RAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGLTGIVLANS 361
Query: 542 SIDITLHDTYYVVA 583
S+DI LHDTYYVVA
Sbjct: 362 SLDIVLHDTYYVVA 375
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 263 bits (644), Expect = 2e-69
Identities = 126/194 (64%), Positives = 147/194 (75%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLFV +V +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHP
Sbjct: 182 PLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 241
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
EVYILILPGFG+ISH+++ GKKE F FIV AHH+FTVG+D+DT
Sbjct: 242 EVYILILPGFGMISHVVTYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDT 301
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 541
RAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLFTVGGLTG++LANS
Sbjct: 302 RAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGLTGIVLANS 361
Query: 542 SIDITLHDTYYVVA 583
SIDI LHDTYYVVA
Sbjct: 362 SIDIVLHDTYYVVA 375
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 258 bits (633), Expect = 5e-68
Identities = 126/193 (65%), Positives = 146/193 (75%)
Frame = +2
Query: 5 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 184
LF +V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHPE
Sbjct: 167 LFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPE 226
Query: 185 VYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTR 364
VYILILPGFGIISH+I E GKKETF FIV AHH+FT+G+D+DTR
Sbjct: 227 VYILILPGFGIISHMIFNESGKKETFGMLGMIYAMLTIGFLGFIVWAHHMFTIGMDVDTR 286
Query: 365 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 544
AYFTSAT+IIA+PTGIKIF +AT G ++ N IL +GF+FLFTVGGLTGV+L+NSS
Sbjct: 287 AYFTSATMIIAIPTGIKIFSWMATFSGVKLMNNLMILWTMGFIFLFTVGGLTGVVLSNSS 346
Query: 545 IDITLHDTYYVVA 583
+D+ LHDTYY VA
Sbjct: 347 VDVVLHDTYYGVA 359
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 255 bits (624), Expect = 6e-67
Identities = 125/194 (64%), Positives = 145/194 (74%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLFV +V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHP
Sbjct: 185 PLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHP 244
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
EVYILILPGFGIISHI+S GK F F+V AHH+FTVG+D+DT
Sbjct: 245 EVYILILPGFGIISHIVSTFSGKP-VFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDT 303
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 541
RAYFT+AT+IIAVPTGIKIF +AT+ G I Y +L +GF+FLFT+GGLTG++LANS
Sbjct: 304 RAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANS 363
Query: 542 SIDITLHDTYYVVA 583
+DI LHDTYYVVA
Sbjct: 364 GLDIALHDTYYVVA 377
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 244 bits (598), Expect = 9e-64
Identities = 120/194 (61%), Positives = 144/194 (74%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLFV ++ +TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGHP
Sbjct: 190 PLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHP 249
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
EVYILILPGFG+ISHI+S +K F FIV AHH++TVG+D+DT
Sbjct: 250 EVYILILPGFGMISHIVSTF-SRKPVFGYIGMVYAMVSIGVLGFIVWAHHMYTVGLDVDT 308
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 541
RAYFT+AT+IIAVPTGIKIF +ATI I+ +L +GF+FLFT+GGLTG++LANS
Sbjct: 309 RAYFTAATMIIAVPTGIKIFSWIATIWEGSIHLKTPMLFAIGFIFLFTIGGLTGIVLANS 368
Query: 542 SIDITLHDTYYVVA 583
+DI+LHDTYYVVA
Sbjct: 369 GLDISLHDTYYVVA 382
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 236 bits (577), Expect = 3e-61
Identities = 116/193 (60%), Positives = 140/193 (72%)
Frame = +2
Query: 5 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 184
LF AV ITA AG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPE
Sbjct: 184 LFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPE 243
Query: 185 VYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTR 364
VYILI+PGFGIIS IS K F F+V +HH++TVG+D+DTR
Sbjct: 244 VYILIIPGFGIISTTISAN-SNKSVFGYLGMVYAMCSIGILGFVVWSHHMYTVGLDVDTR 302
Query: 365 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 544
AYFT+AT+IIAVPTGIKIF LAT +G +++ P++L LGFVF+FT+GGL+GV+LAN+S
Sbjct: 303 AYFTAATLIIAVPTGIKIFSWLATCYGGSLHFIPSLLFALGFVFMFTIGGLSGVVLANAS 362
Query: 545 IDITLHDTYYVVA 583
+DI HDTYYVVA
Sbjct: 363 LDIAFHDTYYVVA 375
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 233 bits (571), Expect = 2e-60
Identities = 113/191 (59%), Positives = 138/191 (72%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHP
Sbjct: 182 PLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHP 241
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
EVYILI+PGFG++SHI+S G K F F+V +HH++ VG+D+DT
Sbjct: 242 EVYILIIPGFGMVSHIVSAFSG-KPVFGYLGMVYAMFSIGILGFLVWSHHMYAVGLDVDT 300
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 541
RAYFT+AT+IIAVPTGIKIF LAT++G + +L LGF+ LFT+GGLTGVILAN+
Sbjct: 301 RAYFTAATMIIAVPTGIKIFSWLATLYGGSLRITTPMLFALGFIALFTIGGLTGVILANA 360
Query: 542 SIDITLHDTYY 574
S+D+ LHD Y
Sbjct: 361 SLDVALHDLKY 371
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 223 bits (544), Expect = 3e-57
Identities = 112/193 (58%), Positives = 137/193 (70%)
Frame = +2
Query: 5 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 184
LF AV ITA A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPE
Sbjct: 210 LFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPE 269
Query: 185 VYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTR 364
VYILI+PGFGIIS +IS K F FIV +HH++TVG+D+DTR
Sbjct: 270 VYILIIPGFGIISTVISAN-SNKNVFGYLGMVYAMMSIGLLGFIVWSHHMYTVGLDVDTR 328
Query: 365 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 544
AYFT+AT+IIA+PTG+KIF LAT +G +++ +L LGFV +FT+GGL+GV+LAN+S
Sbjct: 329 AYFTAATLIIAIPTGVKIFSWLATCYGGSLHFTTPMLFALGFVVMFTIGGLSGVVLANAS 388
Query: 545 IDITLHDTYYVVA 583
+I HDTYYVVA
Sbjct: 389 ENIAFHDTYYVVA 401
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 222 bits (543), Expect = 4e-57
Identities = 102/162 (62%), Positives = 125/162 (77%)
Frame = +2
Query: 98 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXX 277
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I+ GK+E F
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKREPFGYLGM 250
Query: 278 XXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 457
F+V AHH+FTVG+D+DTRAYFT+AT+IIAVPTGIK+F +AT+ G+ +
Sbjct: 251 VYAMIAIGVLGFLVWAHHMFTVGMDVDTRAYFTAATMIIAVPTGIKVFSWMATLQGSNLQ 310
Query: 458 YNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 583
+ + LGFVFLFT+GGLTG++LANSSID+ LHDTYYVVA
Sbjct: 311 WETPLFWALGFVFLFTLGGLTGIVLANSSIDVVLHDTYYVVA 352
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 221 bits (541), Expect = 7e-57
Identities = 109/194 (56%), Positives = 135/194 (69%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP LYQHLF FFGHP
Sbjct: 225 PLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHP 284
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
EVYI+ILPGFGIIS I+S +K F F+V AHH+FT G+ ++
Sbjct: 285 EVYIMILPGFGIISQIVSTF-SRKPVFGYLGMAYAMVAIGVVGFVVWAHHMFTTGMSVNV 343
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 541
+ YFT+AT++IAVPTGIKIF +ATI G I++ ++ LGF+FLFTVGG+TGV+LAN
Sbjct: 344 KMYFTAATMVIAVPTGIKIFSWIATIWGGSISFKTPMVWALGFIFLFTVGGVTGVVLANG 403
Query: 542 SIDITLHDTYYVVA 583
+D LHDTYYVVA
Sbjct: 404 GVDDVLHDTYYVVA 417
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 217 bits (530), Expect = 2e-55
Identities = 107/188 (56%), Positives = 130/188 (69%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLFV A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH F FFGHP
Sbjct: 183 PLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHP 242
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
EVYILI+PGFGI+SHI+S KK F F+V +HH++ VG+D DT
Sbjct: 243 EVYILIIPGFGIVSHIVSTY-SKKPVFGEISMVYAMASIGLLGFLVWSHHMYIVGLDADT 301
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 541
RAYFTSAT+IIA+PTGIKIF LATI+G I ++ + F+FLFTVGGLTGV+LAN+
Sbjct: 302 RAYFTSATMIIAIPTGIKIFSWLATIYGGSIRLAVPMMFAIAFLFLFTVGGLTGVVLANA 361
Query: 542 SIDITLHD 565
S+D+ HD
Sbjct: 362 SLDVAFHD 369
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 217 bits (529), Expect = 2e-55
Identities = 107/194 (55%), Positives = 134/194 (69%), Gaps = 1/194 (0%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLFV +V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGHP
Sbjct: 186 PLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHP 245
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
EVYILILPGFG++SHII+ KK F FIV AHH++T GID T
Sbjct: 246 EVYILILPGFGLVSHIIA-TFSKKRVFGHVPMIAAMLMIGLIGFIVWAHHMYTSGIDTST 304
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQI-NYNPNIL*RLGFVFLFTVGGLTGVILAN 538
+AYFT+AT++IA+PTGIK+F +AT+ G I Y P GFV LFT+GG+TG+IL+N
Sbjct: 305 KAYFTAATMVIAIPTGIKVFNWIATMWGGSIWMYTPMYF-AAGFVVLFTIGGITGIILSN 363
Query: 539 SSIDITLHDTYYVV 580
+ ID ++HDT+YVV
Sbjct: 364 AGIDTSIHDTHYVV 377
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 210 bits (514), Expect = 1e-53
Identities = 103/194 (53%), Positives = 133/194 (68%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHP
Sbjct: 200 PLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHP 259
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
EVYILI+P FG++S I+ Q KK F F V +HH+FTVG+D D+
Sbjct: 260 EVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCVWSHHMFTVGLDADS 318
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 541
RAYF+ A++IIA+PTG KIF LATI+G + + +L +GF+ LFT+GG+TGV++ANS
Sbjct: 319 RAYFSGASLIIAIPTGSKIFSWLATIYGGTLRWTTPLLYAVGFIVLFTIGGVTGVVIANS 378
Query: 542 SIDITLHDTYYVVA 583
S+DI HDTYYVVA
Sbjct: 379 SLDIMFHDTYYVVA 392
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 210 bits (512), Expect = 2e-53
Identities = 102/194 (52%), Positives = 133/194 (68%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLF +V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F FFGHP
Sbjct: 288 PLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHP 347
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
EVYI+ILP FG+ISHI++ KK F F+V AHH++TVG+ +
Sbjct: 348 EVYIVILPAFGVISHIVA-TFSKKPIFGYLPMVYALVAIGGLGFVVWAHHMYTVGMTLTQ 406
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 541
+AYF AT++IAVPTGIKIF +AT+ I++ ++ LGF+FLFT+GG TG+IL+ +
Sbjct: 407 QAYFMVATMVIAVPTGIKIFSWIATMWMGSISFKTPMMFALGFIFLFTLGGTTGIILSQA 466
Query: 542 SIDITLHDTYYVVA 583
+D HDTYYVVA
Sbjct: 467 GVDRAYHDTYYVVA 480
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 200 bits (488), Expect = 2e-50
Identities = 96/176 (54%), Positives = 123/176 (69%), Gaps = 3/176 (1%)
Frame = +2
Query: 65 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 244
A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP FG+ISHI+ +
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHILCRSS 265
Query: 245 GKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR 424
K F F+V HH+F G+DIDTRAYFT+AT++IAVPTG+K+F
Sbjct: 266 AKLHVFGKIGMSWASMGIAWMGFLVWGHHMFVAGLDIDTRAYFTAATLMIAVPTGVKVFN 325
Query: 425 *LATIHG---TQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 583
LATI G + + +P+ +G V LFT+GGLTGVILAN+++ LHD+YYVVA
Sbjct: 326 WLATIFGGVYSLKHSHPSTFWAIGVVLLFTIGGLTGVILANAALSTLLHDSYYVVA 381
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 196 bits (478), Expect = 3e-49
Identities = 97/134 (72%), Positives = 106/134 (79%)
Frame = +2
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
EVYILILPGFG+ISHIISQE GKKE F F+V AHH+FTVG+D+DT
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDT 214
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 541
RAYFTSAT+IIAVPTGIK+F LAT HGTQI Y+P L LGFVFLFTVGGLTGV+LANS
Sbjct: 215 RAYFTSATMIIAVPTGIKVFSWLATFHGTQILYSPVTLWTLGFVFLFTVGGLTGVVLANS 274
Query: 542 SIDITLHDTYYVVA 583
SIDI LHDTYYVVA
Sbjct: 275 SIDIVLHDTYYVVA 288
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 194 bits (472), Expect = 2e-48
Identities = 91/139 (65%), Positives = 108/139 (77%)
Frame = +2
Query: 167 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 346
FFGHPEVYILILPGFG+ISHI++ GKKE F FIV AHH+FTVG
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVG 61
Query: 347 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 526
+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I ++ +L LGF+FLFTVGGLTG+
Sbjct: 62 MDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPMLWALGFIFLFTVGGLTGI 121
Query: 527 ILANSSIDITLHDTYYVVA 583
ILANSS+DI LHDTYYVVA
Sbjct: 122 ILANSSLDIVLHDTYYVVA 140
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 193 bits (470), Expect = 3e-48
Identities = 102/194 (52%), Positives = 117/194 (60%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHP
Sbjct: 183 PLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 242
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
EVYILILPGFG+ISH+++ GKKE F FIV A
Sbjct: 243 EVYILILPGFGMISHVVTYYAGKKEPFGYMGMVWAMLSIGFLGFIVWAXXXXXXXXXXXX 302
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 541
LAT+HG I ++P +L LGF+FLFTVGGLTG++LANS
Sbjct: 303 XXXXXXXXXXXXXXXXXXXXXWLATLHGGTIKWDPPMLWALGFIFLFTVGGLTGIVLANS 362
Query: 542 SIDITLHDTYYVVA 583
S+DI LHDTYYVVA
Sbjct: 363 SLDIALHDTYYVVA 376
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 185 bits (451), Expect = 6e-46
Identities = 92/193 (47%), Positives = 119/193 (61%)
Frame = +2
Query: 5 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 184
+FV +T+F AG++ LL DRN NTSF+D GG+P+LYQHLF FFGHPE
Sbjct: 193 MFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPE 252
Query: 185 VYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTR 364
VY++ILP FGIIS + K F V HH++T G+DIDTR
Sbjct: 253 VYVIILPVFGIISEAVLFLTDKDRLFGQTSMTFASIWIAVLGTSVWGHHMYTAGLDIDTR 312
Query: 365 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 544
YF++AT+IIA+P+ +KIF L T G+ P F+FLFTVGGL+G+IL+ +S
Sbjct: 313 TYFSAATMIIAIPSAVKIFNWLGTFFGSNQKMQPLWCWTYSFIFLFTVGGLSGIILSAAS 372
Query: 545 IDITLHDTYYVVA 583
+DI LHDTYYVVA
Sbjct: 373 LDIILHDTYYVVA 385
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 178 bits (433), Expect = 9e-44
Identities = 87/174 (50%), Positives = 114/174 (65%), Gaps = 1/174 (0%)
Frame = +2
Query: 65 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 244
A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SHI
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSHICMSLS 352
Query: 245 GKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR 424
+F +V HH+F VG D T +F+S T+II VPTGIK+F
Sbjct: 353 NNDSSFGYYGLICAMASIVCLGSVVWGHHMFMVGFDSLTGVFFSSITMIIGVPTGIKVFS 412
Query: 425 *LATIHGTQIN-YNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 583
L ++ + +P + +GF+FLFTVGG+TGV L+ S++DI HDT++VVA
Sbjct: 413 WLYMLNSCGMRVLDPIVWWLVGFIFLFTVGGVTGVALSASALDILFHDTWFVVA 466
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 177 bits (431), Expect = 2e-43
Identities = 86/173 (49%), Positives = 112/173 (64%), Gaps = 1/173 (0%)
Frame = +2
Query: 68 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 247
G + +LL+D + NT FFDP GDPILYQHLF FFGHPEVYILILP FG+ISH+IS
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVISTNY- 268
Query: 248 KKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR* 427
+ F +V HH++T G+++DTRAYFTS TI+I++PTG K+F
Sbjct: 269 CRNLFGNQSMILAMGCIAVLGSLVWVHHMYTTGLEVDTRAYFTSTTILISIPTGTKVFNW 328
Query: 428 LATIHGTQIN-YNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 583
+ T + + + L L F+ FT GG TGVIL N++ID+ LHDTYYV+A
Sbjct: 329 ICTYMSSNFGMIHSSSLLSLLFICTFTFGGTTGVILGNAAIDVALHDTYYVIA 381
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 169 bits (410), Expect = 6e-41
Identities = 85/156 (54%), Positives = 102/156 (65%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGHP
Sbjct: 183 PLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHP 242
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
EVYILI+PGFGIISH++S KK F F+V +HH++ VG+D DT
Sbjct: 243 EVYILIIPGFGIISHVVS-TYSKKPVFGEISMVYAMASIGLLGFLVWSHHMYIVGLDADT 301
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 469
RAYFTSAT+IIA+PTGIKIF L N N N
Sbjct: 302 RAYFTSATMIIAIPTGIKIFSWLMNPFSKDKNKNKN 337
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 165 bits (402), Expect = 5e-40
Identities = 83/192 (43%), Positives = 117/192 (60%)
Frame = +2
Query: 5 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 184
LF+ A ITA AG +T++L DRN NTSF+D GGGD IL+QH+F FFGHPE
Sbjct: 186 LFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPE 245
Query: 185 VYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTR 364
VYI++LP FG+IS I+ + G + F V AHH+F VG+D+D+R
Sbjct: 246 VYIILLPVFGLISTIV-EVIGFRCVFSTVAMIYSMILIAILGMFVWAHHMFVVGMDVDSR 304
Query: 365 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 544
AYF +I+I +PT +K+F + + T + + + F+F+F +G +TG+ L+N
Sbjct: 305 AYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLIGAVTGLFLSNVG 364
Query: 545 IDITLHDTYYVV 580
IDI LHDTY+VV
Sbjct: 365 IDIMLHDTYFVV 376
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 165 bits (400), Expect = 9e-40
Identities = 84/174 (48%), Positives = 114/174 (65%), Gaps = 1/174 (0%)
Frame = +2
Query: 65 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 244
A IT++LTD++L T F+D GGDP+LYQHLF FFGHPEVY++ILP FG+ S I Q
Sbjct: 187 AVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGLFSSSI-QLS 245
Query: 245 GKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR 424
+V AHH++T G+DIDTR+YFT+AT+IIAVPTGIKIF
Sbjct: 246 SLHRIPGELSLVLAMASIALIGSVVWAHHMYTAGLDIDTRSYFTAATMIIAVPTGIKIFT 305
Query: 425 *LAT-IHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 583
L++ + ++ N ++ F+ F +GG +G+IL+N+S+D LHDTYYVVA
Sbjct: 306 WLSSLLTMKRMTLNSLTFLQVSFIVSFAIGGTSGIILSNASVDHYLHDTYYVVA 359
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 156 bits (378), Expect = 4e-37
Identities = 84/193 (43%), Positives = 111/193 (57%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLF A+ T+ A A+ +L D TSFF+P GGGDP++YQHLF F+ HP
Sbjct: 193 PLFCWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHP 252
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
VYI+ILP FG+IS +I +K F IV AHH+FT G
Sbjct: 253 AVYIMILPFFGVISEVIPVH-ARKPIFGYRAIAYSSLAISFLGLIVWAHHMFTSGTPGWL 311
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 541
R +F + T++IAVPTGIKIF T+ G +I N +L GF+ F +GGLTGV++A+
Sbjct: 312 RMFFMATTMLIAVPTGIKIFSWCGTLWGGKIQLNSAMLFAFGFLSSFMIGGLTGVMVASV 371
Query: 542 SIDITLHDTYYVV 580
DI +HDTY+VV
Sbjct: 372 PFDIHVHDTYFVV 384
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 151 bits (367), Expect = 9e-36
Identities = 83/194 (42%), Positives = 112/194 (57%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLFV + AF A LL DR+ T FF P GGD +L+QHLF FFGHP
Sbjct: 200 PLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHP 259
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
EVYILILP GIIS ++ +K F F+V AHH+F VG+
Sbjct: 260 EVYILILPTMGIISEVLPTF-SRKPIFGYAFVAYSGVAIGFLGFLVWAHHMFAVGLGPLA 318
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 541
A+F +A+ +IAVPTG+KIF LAT+ +N ++L +GF+ +F +GG++GV LA+
Sbjct: 319 NAFFGAASFLIAVPTGVKIFNWLATMWQGSLNLTTSMLYAIGFISMFIIGGISGVTLASP 378
Query: 542 SIDITLHDTYYVVA 583
I++ D+YYVVA
Sbjct: 379 PINVQQTDSYYVVA 392
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 149 bits (360), Expect = 6e-35
Identities = 78/171 (45%), Positives = 108/171 (63%), Gaps = 1/171 (0%)
Frame = +2
Query: 71 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 250
AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP FG+ S I++
Sbjct: 217 AITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFGLTSLILTSII-H 273
Query: 251 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 430
K+ F + V AHH+FTVG+DID+R+YF+ AT II++PT +K+F +
Sbjct: 274 KDIFGREGMMYCIISIGVVGYFVWAHHMFTVGLDIDSRSYFSIATSIISIPTSVKMFSYI 333
Query: 431 AT-IHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVV 580
T G N + F+ F GG TG++L++ S+DI LHDTY+VV
Sbjct: 334 NTWASGRGFRGNNSSWSFFSFLICFCFGGFTGLLLSSGSLDIMLHDTYFVV 384
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 148 bits (359), Expect = 8e-35
Identities = 78/194 (40%), Positives = 111/194 (57%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLFV + + A A+ +LL DR L ++FFDP GG +L+QH F FGHP
Sbjct: 201 PLFVWMMLMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHP 260
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
EVYILILPGFG+IS +I +K + + V AHH+F VG+ +
Sbjct: 261 EVYILILPGFGMISEVIPVF-SRKPIYGYTFVAASSVAIVLLGYGVWAHHMFAVGLGMYA 319
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 541
+F +++IA+PTGIK+F AT+ G +I +N ++ + F+ F +GGLTG++ A
Sbjct: 320 DIFFAVGSLLIAIPTGIKVFNWTATLWGGEIQFNTSLHFAVAFLLQFVIGGLTGIMFAAV 379
Query: 542 SIDITLHDTYYVVA 583
ID L DTY+VVA
Sbjct: 380 PIDWQLTDTYFVVA 393
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 146 bits (355), Expect = 3e-34
Identities = 76/170 (44%), Positives = 105/170 (61%)
Frame = +2
Query: 71 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 250
A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+S I+ + G+
Sbjct: 260 ALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKFSGR 318
Query: 251 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 430
K F F V AHH+FT GID R+ F + ++ I++P+ +K+F +
Sbjct: 319 K-LFGFKFVVYSTLAIGVLSFGVWAHHMFTTGIDPRIRSSFMAVSLAISIPSAVKVFNWI 377
Query: 431 ATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVV 580
T+ ++ +L +GFV F +GG+TGV LA ID+ LHDTYYVV
Sbjct: 378 TTMWNGKLRLTAPMLFCIGFVQNFIIGGVTGVFLAVIPIDLILHDTYYVV 427
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 145 bits (352), Expect = 6e-34
Identities = 73/170 (42%), Positives = 101/170 (59%)
Frame = +2
Query: 74 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 253
+ +++ DR T+FF+P GG+ ++++HLF FGHPEVYILILP FGI S +I +K
Sbjct: 215 LALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFSEVIPVF-ARK 273
Query: 254 ETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LA 433
F F+V HH+FT G+ A F AT+ IA+PTGIKIF L
Sbjct: 274 RLFGYSSMVFAIVLIGFLGFMVWVHHMFTTGLGPIANAIFAVATMAIAIPTGIKIFNWLL 333
Query: 434 TIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 583
TI G + Y +L + F+ F +GG+TGV+LA ++ D HDTY+VVA
Sbjct: 334 TIWGGNVKYTTAMLYAVSFIPSFVLGGVTGVMLAAAAADYQFHDTYFVVA 383
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 143 bits (347), Expect = 2e-33
Identities = 76/194 (39%), Positives = 114/194 (58%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLFV ++ +T+F A T L+ DR + T FF+PA GGD +L+QHLF FFGHP
Sbjct: 198 PLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHP 257
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
EVYI+ LP G++S I++ ++ F F + HH+F G+
Sbjct: 258 EVYIIFLPAVGMVSSIVATFT-QRPVFGYLAMVMALIATGVLAFGLWVHHMFVAGLPRLG 316
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 541
++FT++++ IAVP G++IF LATI + + L +GF+ +F +GGLTGV++A+
Sbjct: 317 ESFFTASSMAIAVPAGLQIFCWLATIWAGRPIFKTPFLFVIGFIVVFVIGGLTGVMVASV 376
Query: 542 SIDITLHDTYYVVA 583
D +HDTY+VVA
Sbjct: 377 PFDTQVHDTYFVVA 390
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 143 bits (346), Expect = 3e-33
Identities = 78/194 (40%), Positives = 107/194 (55%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
P+FV +T+ A+ +L+ DR +FF+ GG + YQHLF FGHP
Sbjct: 202 PVFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHP 261
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
EVYILILP GIIS +I +K F F V +HH+FTVG+
Sbjct: 262 EVYILILPAMGIISEVIPVH-ARKMLFGYSVMVFSTALIGFMGFTVWSHHMFTVGMGPVV 320
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 541
+ F+ T+ IAVPTG+KIF L+T+ G QI + +L +GF+ FT+GGL+G + A +
Sbjct: 321 NSIFSLTTMAIAVPTGVKIFNWLSTMWGGQIRFTAAMLFAIGFIASFTIGGLSGFMHAAA 380
Query: 542 SIDITLHDTYYVVA 583
D HDTY+VVA
Sbjct: 381 PSDAQQHDTYFVVA 394
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 141 bits (342), Expect = 1e-32
Identities = 77/170 (45%), Positives = 102/170 (60%)
Frame = +2
Query: 71 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 250
AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GIIS+I+ + G+
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYILPRFSGR 349
Query: 251 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 430
+ F F V AHH+F G+D RA F + ++ IAVP+ +K F +
Sbjct: 350 R-LFGFKFVVYSTLAIGVLSFGVWAHHMFATGLDPRLRASFMAVSLAIAVPSAVKTFNWI 408
Query: 431 ATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVV 580
T+ I +L +GFV F +GG+TGV LA+ +D+ LH TYYVV
Sbjct: 409 TTMWNGNIRLTTPMLFSVGFVANFILGGVTGVFLASIPVDLVLHATYYVV 458
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 139 bits (337), Expect = 4e-32
Identities = 70/172 (40%), Positives = 104/172 (60%)
Frame = +2
Query: 65 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 244
AGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP FG S II
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEIIPVF- 217
Query: 245 GKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR 424
++ F F + HH+F G+ TR F+ T++IAVPTGIKIF
Sbjct: 218 ARRPLFGYTSMVFAVWAITAVSFFLWIHHMFVSGVPNWTRVLFSYTTLLIAVPTGIKIFN 277
Query: 425 *LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVV 580
+ T++ I++ +L LG VF+F +GGLTG+ L +ID+ + D+ +VV
Sbjct: 278 WMLTLYRGAIHFRSQMLYALGGVFMFLIGGLTGLPLGMVAIDLGVSDSLFVV 329
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 139 bits (337), Expect = 4e-32
Identities = 81/204 (39%), Positives = 112/204 (54%), Gaps = 10/204 (4%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG------GGDPILY 151
PL + A ITA A +L+ DR+L TSFF AG GG P+L+
Sbjct: 234 PLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLF 293
Query: 152 QHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHH 331
QHLF F GHPEVYI+++P GI S +I+ +K F FIV AHH
Sbjct: 294 QHLFWFLGHPEVYIVLIPALGITSEVIATN-ARKPIFGYKAMIGSILGIAVLSFIVWAHH 352
Query: 332 IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVG 511
+F G++ + F T+IIAVP+ +K F + T+ I + P ++ +G V +F G
Sbjct: 353 MFVTGMNPFLGSVFMFLTLIIAVPSAVKSFNYITTLWRGNIIFTPAMMFSIGLVSMFISG 412
Query: 512 GLTGVILANSSIDITLHDTYYVVA 583
G+TG+IL N+++DI LHDTYYVVA
Sbjct: 413 GVTGIILGNNAMDIQLHDTYYVVA 436
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 138 bits (335), Expect = 7e-32
Identities = 72/177 (40%), Positives = 103/177 (58%), Gaps = 5/177 (2%)
Frame = +2
Query: 65 AGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 229
AGAI +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G++S +
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVSEV 267
Query: 230 ISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 409
I Q ++ + F V HH+FT D R AT+ +A+P+G
Sbjct: 268 I-QRMARRRAYGYTAIAISSVAIASISFAVWMHHMFTAVQDFAPRVAMAIATMAVAIPSG 326
Query: 410 IKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVV 580
+K+F +AT++G +I +L L F+ F VGG+TGV ++D+ LHDTY+V+
Sbjct: 327 VKVFNWVATLYGGRIQLKAPMLFMLTFLLFFIVGGVTGVFFPVITLDLHLHDTYFVL 383
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 138 bits (333), Expect = 1e-31
Identities = 69/172 (40%), Positives = 104/172 (60%)
Frame = +2
Query: 68 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 247
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FGI S ++S G
Sbjct: 249 GALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAG 308
Query: 248 KKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR* 427
K+ F F+V HH FT+G + A+F AT+II++PTG+K+F
Sbjct: 309 KR-LFGHKSMIYASGAISVLGFMVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKLFNW 367
Query: 428 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 583
L TI+ ++ + IL LGF+ F++GG+TGV+LA D LH++ +++A
Sbjct: 368 LFTIYKGRLRFETPILWTLGFMVTFSIGGMTGVLLAVPGADYVLHNSLFLIA 419
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 135 bits (326), Expect = 8e-31
Identities = 74/205 (36%), Positives = 112/205 (54%), Gaps = 11/205 (5%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP-----------AGGGDPIL 148
PL + A+ ITA A ++L DR + T FF P AGGG P+L
Sbjct: 220 PLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLL 279
Query: 149 YQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AH 328
+QHLF F+ HP VYI+ILP G++S I++ +K F FIV H
Sbjct: 280 WQHLFWFYSHPAVYIMILPAMGMVSDILACF-SRKPIFGYKPMVYSICGIAGLGFIVWGH 338
Query: 329 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 508
H+F G++ F AT++IA+P+ +K F L T++G ++ + +L L FV +F +
Sbjct: 339 HMFVSGMNPGLGMTFMVATMMIALPSAVKTFNWLGTVYGGKVQFTTPMLFALSFVSMFVI 398
Query: 509 GGLTGVILANSSIDITLHDTYYVVA 583
GGL+G+ +A + +DI +HDTY++VA
Sbjct: 399 GGLSGIFMAATPVDIVIHDTYFIVA 423
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 134 bits (324), Expect = 1e-30
Identities = 63/79 (79%), Positives = 72/79 (91%)
Frame = +2
Query: 347 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 526
+ + TRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY+P++L LGFVFLFTVGGLTGV
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSLLWALGFVFLFTVGGLTGV 60
Query: 527 ILANSSIDITLHDTYYVVA 583
+LANSS+DI LHDTYYVVA
Sbjct: 61 VLANSSLDIVLHDTYYVVA 79
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 133 bits (322), Expect = 3e-30
Identities = 74/178 (41%), Positives = 100/178 (56%), Gaps = 10/178 (5%)
Frame = +2
Query: 80 ILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 229
+LL DR L TSFF P GGG P+L+QHLF FFGHPEVYI+ LP FGI+S +
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDL 297
Query: 230 ISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 409
IS +K F F+V AHH++ G+ +F + T+IIA+PT
Sbjct: 298 ISTH-ARKNIFGYRMMVWAIVAIGALSFVVWAHHMYVSGMYPYFGFFFATTTLIIAIPTA 356
Query: 410 IKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 583
IK++ + T+ I+ +L LGF+ F GGLTG+ L N +D+ L DT +VVA
Sbjct: 357 IKVYNWVLTLWHGDIHLTVPMLFALGFIITFVNGGLTGLFLGNVVVDVPLSDTMFVVA 414
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 133 bits (321), Expect = 3e-30
Identities = 66/171 (38%), Positives = 99/171 (57%)
Frame = +2
Query: 71 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 250
A+ +L DR L+ F GG+P++Y +LF +GHPEVYILILP FG+ S + S GK
Sbjct: 249 ALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGK 308
Query: 251 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 430
+ F F V HH FT+G +F AT++I++PTG+K+F L
Sbjct: 309 R-LFGHHSMIYASGAIAVLGFAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWL 367
Query: 431 ATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 583
TI+ ++ + I+ LGF+ F++GG+TGV+LA D LH++ +V+A
Sbjct: 368 FTIYQGRLRFTAPIMWTLGFMITFSIGGMTGVLLAVPGADFVLHNSLFVIA 418
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 131 bits (317), Expect = 1e-29
Identities = 73/194 (37%), Positives = 109/194 (56%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
P+FV AV + +F A +L DR FF A GDPIL+QHLF FFGHP
Sbjct: 205 PIFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHP 263
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
EVYI+ +P G++S II ++ F F + HH+FT G+
Sbjct: 264 EVYIIFIPALGMVSSIIITFT-QRPIFGYIPIVLSIVAIGFIGFGLWVHHMFTAGLPQLG 322
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 541
+FT+++ +IA+P+G++IF +AT+ G++ +L LGF +F +GGL+GV++A+
Sbjct: 323 SNFFTASSAMIAIPSGVQIFCWIATLWGSKPKLATPLLHVLGFFLIFIIGGLSGVMVASV 382
Query: 542 SIDITLHDTYYVVA 583
D+ HDTY+VVA
Sbjct: 383 PFDMQAHDTYFVVA 396
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 131 bits (317), Expect = 1e-29
Identities = 67/194 (34%), Positives = 107/194 (55%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
P++V +V + A ++L +R + S+F+PA GGDP+L+Q F F+ HP
Sbjct: 192 PIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHP 251
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
VY+++LP GI++ + S +K F +V AHH+FTVG
Sbjct: 252 TVYVMLLPYLGILAEVASTF-ARKPLFGYRQMVWAQMGIVVLGTMVWAHHMFTVGESTLF 310
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 541
+ F T +IAVPTG+K+F + T+ G ++ + LGF+F F +GG+TGV+L+ +
Sbjct: 311 QIAFAFFTALIAVPTGVKLFNIIGTLWGGKLQMKTPLYWVLGFIFNFLLGGITGVMLSMT 370
Query: 542 SIDITLHDTYYVVA 583
+D HD+Y+VVA
Sbjct: 371 PLDYQFHDSYFVVA 384
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 131 bits (316), Expect = 1e-29
Identities = 73/189 (38%), Positives = 100/189 (52%), Gaps = 1/189 (0%)
Frame = +2
Query: 17 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 196
++ +T+F ++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+
Sbjct: 193 SIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIM 252
Query: 197 ILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFT 376
ILPGFGIIS ++S KE F + YFT
Sbjct: 253 ILPGFGIISLLLSTYT-TKEMFGNQTMILAMGFNSFVRLFGLGTSYVHIRFGSRYSRYFT 311
Query: 377 SATIIIAVPTGIKIFR*LATIHGTQ-INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDI 553
+ TI+IA+PTG KIF + T+ + I +L + F+ F +GG TGV+L N+ ID+
Sbjct: 312 TVTILIALPTGNKIFNWVTTLQCVESIKSLGLVLFTVLFIVNFVIGGTTGVVLGNAGIDL 371
Query: 554 TLHDTYYVV 580
LHDT YVV
Sbjct: 372 ALHDTVYVV 380
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 130 bits (315), Expect = 2e-29
Identities = 73/197 (37%), Positives = 111/197 (56%), Gaps = 3/197 (1%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
P+F A+ I A A +L +R+ FF GGDP+L+QHLF FFGHP
Sbjct: 208 PIFAWAMLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHP 267
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
EVYI+ LP G++S I+ + F + HH+FT GI +
Sbjct: 268 EVYIIFLPAAGLVSMIV-PTMARHPLVGYRLIVVALIGTGFFSFGLWVHHMFTTGIPSLS 326
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINY---NPNIL*RLGFVFLFTVGGLTGVIL 532
+F++A++ +A+P+GI++F +ATI ++ + P++ LGF+F+FTVGG+TGV++
Sbjct: 327 LGFFSAASMAVAIPSGIQVFSWIATIASSKERFRITTPSLF-VLGFLFIFTVGGVTGVMV 385
Query: 533 ANSSIDITLHDTYYVVA 583
A ID +HDTY+VVA
Sbjct: 386 ALVPIDFQVHDTYFVVA 402
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 130 bits (315), Expect = 2e-29
Identities = 70/194 (36%), Positives = 105/194 (54%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
P+F IT A+ +L DR FF GG P+L+ +LF +GHP
Sbjct: 222 PMFTWTTLITMVIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHP 281
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
EVYI+ILP FGI S IIS +K+ F F+V HH FT+G
Sbjct: 282 EVYIVILPAFGIFSEIISSF-ARKQLFGYKAMVGSIIAISVLSFLVWTHHFFTMGNSASV 340
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 541
++F+ T+ I++PTG+KIF L T++ +I++ +L L F+ F +GG+TGV+LA +
Sbjct: 341 NSFFSITTMAISIPTGVKIFNWLFTMYKGRISFTTPMLWALAFIPNFVIGGVTGVMLAMA 400
Query: 542 SIDITLHDTYYVVA 583
+ D H+TY++V+
Sbjct: 401 AADYQYHNTYFLVS 414
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 130 bits (314), Expect = 2e-29
Identities = 69/172 (40%), Positives = 94/172 (54%)
Frame = +2
Query: 68 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 247
G +LL D + TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S +
Sbjct: 230 GGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSELF-PVYA 288
Query: 248 KKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR* 427
+K F IV AHH+F G R F T++IA+PTG+K+F
Sbjct: 289 RKPLFGYRFVAIASFGITFLSLIVWAHHMFYTGTPNWMRHIFMFTTMLIAIPTGVKVFAW 348
Query: 428 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 583
L T+ + N +L +G + F G+TGV+LA IDI + +TY+VVA
Sbjct: 349 LGTLWAGNLRLNTPMLFCIGGLINFIFAGITGVMLATVPIDIHVGNTYFVVA 400
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 130 bits (314), Expect = 2e-29
Identities = 57/81 (70%), Positives = 62/81 (76%)
Frame = +1
Query: 97 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRN 276
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK N W+F +
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSD 66
Query: 277 NLCYTSNWVIRIYCLSSSYIH 339
NLCY SNW+I IYCLSSSYI+
Sbjct: 67 NLCYISNWIISIYCLSSSYIY 87
Score = 95.1 bits (226), Expect = 1e-18
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = +2
Query: 368 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 529
YFTSAT+IIAVPTGIKIF LAT HGTQINY+P+IL LGFVFLFTVGGLTGVI
Sbjct: 97 YFTSATMIIAVPTGIKIFSWLATFHGTQINYSPSILWSLGFVFLFTVGGLTGVI 150
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 127 bits (307), Expect = 2e-28
Identities = 68/195 (34%), Positives = 99/195 (50%), Gaps = 1/195 (0%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGH 178
PLFV A+ T+ G + +L+T NL FDPA GGDP+L+QHLF F+ H
Sbjct: 208 PLFVWAIYATS-CIQVLATPVIGLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSH 266
Query: 179 PEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDID 358
P VYI++LP FG++S +++ +K F F HH+F G
Sbjct: 267 PAVYIMVLPSFGVMSEVVA-TYSRKNIFGYRAVAYSSLGIAFVGFFAWGHHMFVSGQSTF 325
Query: 359 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 538
F T+I+ V T IK+F + T++ + + GF+F GG+TG+ L
Sbjct: 326 AGGLFGVLTMIVGVFTAIKVFNWVGTVYKGAVEFKTPFAYFCGFLFFTVFGGMTGIALGT 385
Query: 539 SSIDITLHDTYYVVA 583
S+D+ HDTY+VVA
Sbjct: 386 VSLDVAWHDTYFVVA 400
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 126 bits (305), Expect = 3e-28
Identities = 62/171 (36%), Positives = 102/171 (59%)
Frame = +2
Query: 71 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 250
A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+LI+P FG I+ I+ +
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGFINMIVPHNNTR 425
Query: 251 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 430
+ ++V HH++ VG+D +R +++ TI+I++P IK+
Sbjct: 426 R-VASKHHMIWAIYVMAYMGYLVWGHHMYLVGLDHRSRTMYSTITIMISMPATIKVVNWT 484
Query: 431 ATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 583
++ + + L + F+ LF V G TG+ L++ S+++++HDT+YVVA
Sbjct: 485 LSLVNGALKVDLPFLFSMSFLLLFLVAGFTGMWLSHVSLNVSMHDTFYVVA 535
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 125 bits (302), Expect = 7e-28
Identities = 60/93 (64%), Positives = 76/93 (81%), Gaps = 2/93 (2%)
Frame = +2
Query: 311 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN--YNPNIL*RL 484
FIV A H++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT+ G+ N + + L
Sbjct: 250 FIVWADHMYVVGMDVDTRAYFTAATMIIAVPTGIKIFSWLATVSGSGRNLIFTTPMAWAL 309
Query: 485 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 583
GF+FLFT+GGLTG++L+NSS+DI LHDTYYVVA
Sbjct: 310 GFIFLFTIGGLTGIVLSNSSLDILLHDTYYVVA 342
Score = 81.4 bits (192), Expect = 1e-14
Identities = 40/58 (68%), Positives = 43/58 (74%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 175
PLFV +V ITA AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 183 PLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 124 bits (299), Expect = 2e-27
Identities = 65/171 (38%), Positives = 99/171 (57%)
Frame = +2
Query: 71 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 250
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS II +
Sbjct: 268 ALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEIIPTF-AE 326
Query: 251 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 430
K F + V HH FT+G +F++AT+++ +PTG+K+F
Sbjct: 327 KPLFGYATMVIATFAIGGISWGVWLHHFFTMGAGPGINIFFSTATMLVGIPTGVKVFNWA 386
Query: 431 ATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 583
T+ ++ + P +L LG +FL VGGLTG++LA +I+ T+H++ +VVA
Sbjct: 387 LTLWRGRLRFEPPMLWALGALFLLLVGGLTGMMLAIPAINYTVHNSVFVVA 437
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 123 bits (296), Expect = 4e-27
Identities = 64/168 (38%), Positives = 100/168 (59%)
Frame = +2
Query: 80 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 259
+L +R L FFD GGDP+L+QHLF FGHPEVYI+ LP G+++ ++ G K
Sbjct: 250 LLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATMLPTFVG-KPL 308
Query: 260 FXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 439
F F + AHH+F G+ I + + F++A+ ++AVPTG++IF +AT+
Sbjct: 309 FGYGFAVAAVVTMSFLSFGLWAHHMFATGLPILSLSLFSAASTMVAVPTGVQIFCFIATL 368
Query: 440 HGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 583
+ + LGF+F+F +GG+TGV++A ++ HD+Y+VVA
Sbjct: 369 SQGKPRLTVPMHFILGFLFIFVLGGMTGVMVAAVPFNLQAHDSYFVVA 416
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 121 bits (292), Expect = 1e-26
Identities = 64/167 (38%), Positives = 96/167 (57%)
Frame = +2
Query: 83 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 262
L DR L+ FF GG+ + + ++F FGHPEVYILILP FG+ S I S GK F
Sbjct: 273 LALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGVYSEIFSTFSGKV-LF 331
Query: 263 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIH 442
F+V HH FT+G A F A+++I +PTG+KI+ + T+
Sbjct: 332 GYKSLVWATISIAFLSFLVWLHHFFTMGQSGHINAVFGIASMLIGIPTGVKIYDWMWTML 391
Query: 443 GTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 583
+I ++ ++ L F+FLF +GG+TG++LAN +D +H+T ++VA
Sbjct: 392 RGRIRFSVPMIYSLAFIFLFVIGGITGIMLANPILDYQVHNTVFLVA 438
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 120 bits (288), Expect = 3e-26
Identities = 66/194 (34%), Positives = 99/194 (51%), Gaps = 1/194 (0%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLFV TA + +R T FFD A GG P+L+Q LF FFGHP
Sbjct: 180 PLFVWGFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGHP 239
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI-V*AHHIFTVGIDID 358
EVYILILP G++S ++ + ++E F + V HH+FT +
Sbjct: 240 EVYILILPAMGLVSELL-PKMARREIFGYTAIALSSIAIAFLSALGVWMHHMFTAIDNTL 298
Query: 359 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 538
+ ++ T+ IA+P+G+K+ AT++G +I Y + + F+ +F +GG+TGV
Sbjct: 299 VQIVSSATTMAIAIPSGVKVLNWTATLYGGEIRYKTPTILLISFIVMFLLGGITGVFFPL 358
Query: 539 SSIDITLHDTYYVV 580
ID L+ TY+VV
Sbjct: 359 VPIDYALNGTYFVV 372
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 120 bits (288), Expect = 3e-26
Identities = 65/167 (38%), Positives = 94/167 (56%)
Frame = +2
Query: 83 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 262
+L DR L +DPA GG +L+QHLF FFGHPEVY+L LP FGI+S II +K F
Sbjct: 235 VLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIVSEIIPVF-SRKPMF 292
Query: 263 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIH 442
V AHH+F G + +F+ T +I+VPTG+K F + T+
Sbjct: 293 GYVGLIFATLSIGALSMAVWAHHMFVTGAVL--LPFFSFMTFLISVPTGVKFFNWVGTMW 350
Query: 443 GTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 583
I + ++ +GF+ F GGLTG++LA+ +D L D+Y+++A
Sbjct: 351 KGHITWETPMIWSVGFMATFLFGGLTGIMLASPPLDFHLADSYFLIA 397
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 119 bits (287), Expect = 4e-26
Identities = 69/198 (34%), Positives = 102/198 (51%), Gaps = 5/198 (2%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHLF* 166
PL + + +TA A +LL DR+ T FF GGGDPIL+QHLF
Sbjct: 215 PLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFW 274
Query: 167 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 346
FGHPEVYI+ILP +GI+ ++S K + + HH+F G
Sbjct: 275 IFGHPEVYIMILPAWGILGDVLSFFARKPHHWYRGTVWAMVLVTVLSAMVY-GHHMFMTG 333
Query: 347 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 526
+ F T++I++P+ + + + T+ + Y+ +L LG VF+F VGGLTG+
Sbjct: 334 MSPLLGEGFMLFTLLISIPSMVVVVNWVLTLWQGSLRYDTPMLFALGTVFVFGVGGLTGL 393
Query: 527 ILANSSIDITLHDTYYVV 580
L + S+D+ LHDT +VV
Sbjct: 394 FLGDISMDLYLHDTMFVV 411
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 118 bits (284), Expect = 1e-25
Identities = 67/181 (37%), Positives = 96/181 (53%), Gaps = 11/181 (6%)
Frame = +2
Query: 71 AITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGHPEVYILILPGFGI 217
A +L DR TSFF P+G GG +L+QHLF FFGHPEVYI ILP GI
Sbjct: 242 ACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAMGI 301
Query: 218 ISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIA 397
+SHI+ ++ ++V HH+F G++ + F+ T+II
Sbjct: 302 VSHILINSM-RRPLLSHRVVIGSMISIGFLSYVVWGHHMFVSGMNPLSSLVFSFPTLIIT 360
Query: 398 VPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYV 577
+P + L +++G+++ N L LGF+ +F GG++G LA SIDI LH TY+V
Sbjct: 361 IPATVLTLIWLGSLYGSRLRINSASLFALGFISMFVSGGVSGFFLAQPSIDIYLHATYFV 420
Query: 578 V 580
V
Sbjct: 421 V 421
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 118 bits (283), Expect = 1e-25
Identities = 60/194 (30%), Positives = 93/194 (47%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLFV ++ T+ ++ ++ + FDPA GGDP+L+QH F F+ HP
Sbjct: 201 PLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHP 260
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
VYI++LP +IS ++ +K F F HH+FT G
Sbjct: 261 AVYIMVLPAMAVISEVVC-AFSRKNIFGYKAVAYSSLGIAFVGFFTWGHHMFTSGQSAFN 319
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 541
F ++ + + T IK+F AT++ I + GF+F GG+TG+ LA
Sbjct: 320 GGVFGVLSMFVGIFTAIKVFNWTATLYKGSIYFATPFAYFAGFLFFLVFGGMTGIALATV 379
Query: 542 SIDITLHDTYYVVA 583
S+D+ HDTY++VA
Sbjct: 380 SLDVHWHDTYFIVA 393
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 118 bits (283), Expect = 1e-25
Identities = 59/152 (38%), Positives = 90/152 (59%)
Frame = +2
Query: 128 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXX 307
GGG P+L+QHLF F+ HP VYI++LP G++S ++S +K F
Sbjct: 276 GGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLSC-MCRKPLFGYKPMVFSMSAIASL 334
Query: 308 XFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLG 487
FIV HH+FT G++ F +T++IA+P+ IK F ATI G ++ +N L +
Sbjct: 335 GFIVWGHHMFTSGMNPAVGMAFMVSTMMIALPSAIKTFNWTATIWGGKLEFNTVTLNCIA 394
Query: 488 FVFLFTVGGLTGVILANSSIDITLHDTYYVVA 583
F+ +F VGGL+G+ +A +D+ HDTY++VA
Sbjct: 395 FLSMFIVGGLSGIFMAAVPVDVYFHDTYFIVA 426
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 117 bits (282), Expect = 2e-25
Identities = 60/100 (60%), Positives = 73/100 (73%), Gaps = 14/100 (14%)
Frame = +2
Query: 326 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 505
HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G I P +L LGFVFLFT
Sbjct: 349 HHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKMTPVMLFSLGFVFLFT 408
Query: 506 VGGL--------------TGVILANSSIDITLHDTYYVVA 583
+GGL +GV+LAN+S+DI HDTYYVVA
Sbjct: 409 IGGLLNHLLWKINKFRFVSGVVLANASLDIAFHDTYYVVA 448
Score = 99 bits (238), Expect = 4e-20
Identities = 45/59 (76%), Positives = 50/59 (84%)
Frame = +2
Query: 74 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 250
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 117 bits (282), Expect = 2e-25
Identities = 60/121 (49%), Positives = 74/121 (61%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHP
Sbjct: 200 PLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHP 259
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
EVYILI+P FG++S I+ Q KK F F V +HH+FTVG+D D
Sbjct: 260 EVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCVWSHHMFTVGLDADK 318
Query: 362 R 364
R
Sbjct: 319 R 319
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 116 bits (280), Expect = 3e-25
Identities = 55/81 (67%), Positives = 66/81 (81%)
Frame = +2
Query: 341 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 520
VG+ + RAYFTSAT+IIA+PTGIK F LAT G I ++P +L LGF+FLFTVGGLT
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDPPMLWALGFIFLFTVGGLT 355
Query: 521 GVILANSSIDITLHDTYYVVA 583
G++LANSS+DI LHDTYYVVA
Sbjct: 356 GIVLANSSLDIALHDTYYVVA 376
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 116 bits (280), Expect = 3e-25
Identities = 64/169 (37%), Positives = 96/169 (56%), Gaps = 1/169 (0%)
Frame = +2
Query: 80 ILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKE 256
+LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G ++ +IS GK
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADVISTFSGKP- 273
Query: 257 TFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT 436
+ F+V HH+F G +I TR +++ TI+I++P + + + T
Sbjct: 274 IYAKRYILTAFLIATIISFVVWMHHMFITGTNIYTRLFYSITTILISIPFEMAVMSFIFT 333
Query: 437 IHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 583
++ ++ Y +L +G + F +GG TGV L + +ID TY+VVA
Sbjct: 334 LYKGRLVYTVPMLFAVGALLNFIIGGSTGVYLGSIAIDRGFRGTYWVVA 382
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 114 bits (275), Expect = 1e-24
Identities = 61/167 (36%), Positives = 93/167 (55%)
Frame = +2
Query: 83 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 262
+ DR L+T F+ GG +LY +L +GHPEVYILILP FGI S IIS K F
Sbjct: 248 IFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEIISY-ICVKSVF 306
Query: 263 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIH 442
F+V HH FT+G + +F+ +T+IIA+PTG+KIF + TI
Sbjct: 307 SYISLIYATISITVLSFLVWLHHFFTMGSGYLSNIFFSISTMIIAIPTGVKIFNWIFTIL 366
Query: 443 GTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 583
+ + + F+ +F++GG +GVIL+ ++D H++ +++A
Sbjct: 367 FSNFKKDILFFWFISFIIIFSIGGFSGVILSIPNLDFIFHNSMFLIA 413
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 114 bits (275), Expect = 1e-24
Identities = 58/170 (34%), Positives = 92/170 (54%)
Frame = +2
Query: 71 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 250
A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY++ LP ++ I++
Sbjct: 205 AVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIVATFARN 264
Query: 251 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 430
+ V HH++ G+ R T++I++P G+ + +
Sbjct: 265 RVFNYKMVVYGGIGGIVLLSGEVWIHHLYVTGMPDWLRVGQMVTTVLISIPVGLMVIGLV 324
Query: 431 ATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVV 580
T++G I++ +L LGF+FLF +GGLTGV LA S+ + L +TYYVV
Sbjct: 325 GTLYGGSISFETPMLYALGFIFLFLIGGLTGVPLALVSLTVHLSETYYVV 374
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 114 bits (275), Expect = 1e-24
Identities = 63/171 (36%), Positives = 93/171 (54%)
Frame = +2
Query: 71 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 250
A +L DRN T FFD A GG P+L+QHLF F HP VY+++LP GI+S + +
Sbjct: 241 AFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVSDALPTFC-R 299
Query: 251 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 430
+ F V HH+F GI A+F +A+++I++P+ + +F +
Sbjct: 300 RPLVAYEAVAVSTVATMLIGFEVWVHHMFATGIAPLALAFFGAASMLISIPSAVAVFAWI 359
Query: 431 ATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 583
ATI + + L GFV +F VGG++GV+ A +D L DTY+VVA
Sbjct: 360 ATIWTGRPVFRTPFLYFAGFVLMFVVGGVSGVMTAAVPLDWQLTDTYFVVA 410
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 113 bits (272), Expect = 3e-24
Identities = 65/194 (33%), Positives = 95/194 (48%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
P+F ++ T+ A + + L S F+P GG P+LYQ F F+ HP
Sbjct: 200 PVFAWSIFATSILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFYSHP 259
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
VY+++LP GI + + S +K F IV HH+F VGI
Sbjct: 260 AVYVMLLPYLGIGAEVAS-TMARKPLFGYRVMVYSMLAIVLVSCIVWLHHMFAVGIPEAW 318
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 541
+ F +T+I+AVPTG+KIF + T+ G +I +GF+F F +GG+TGV L
Sbjct: 319 QIAFMISTLIVAVPTGVKIFNLIGTLWGGRILMRMPTYWLIGFIFNFLIGGITGVSLGMI 378
Query: 542 SIDITLHDTYYVVA 583
D + +YYVVA
Sbjct: 379 PFDYQVTMSYYVVA 392
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 113 bits (272), Expect = 3e-24
Identities = 58/164 (35%), Positives = 93/164 (56%)
Frame = +2
Query: 92 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 271
+R + FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+ ++
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIVPTA-ARQPIVGYS 312
Query: 272 XXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ 451
F + HH+FT G+ + +F++A+ + +PTGI++F +AT+ +
Sbjct: 313 WIVLSAVGTGFLSFGLWVHHMFTTGLPALSLGFFSAASEAVVIPTGIQLFAFVATLMVGR 372
Query: 452 INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 583
+ +L G + +FT GGLTGV++A + D +HDTY++VA
Sbjct: 373 VKMILPMLWIAGGLAVFTAGGLTGVMVAIAPFDWQVHDTYFIVA 416
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 113 bits (271), Expect = 4e-24
Identities = 67/198 (33%), Positives = 104/198 (52%), Gaps = 4/198 (2%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
P+F A+ + A A +L +R + FF GGDP+L+QHLF FFGHP
Sbjct: 267 PVFAWAMLVFALMIVFAFPAVILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHP 326
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
EVYI+ LP G++S I+ + F + HH+FT GI +
Sbjct: 327 EVYIIFLPAAGMVSMIV-PTMARTPLVGYRFVVLALVGTAFLSFGLWVHHMFTTGIPQLS 385
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATI-HGT---QINYNPNIL*RLGFVFLFTVGGLTGVI 529
++F +A+ +A+P+G+++F +AT G ++ L LGF+F+F +GGLTGV+
Sbjct: 386 LSFFQAASTAVAIPSGMQVFAWIATFARGRATGRVRIATPTLFILGFLFIFVLGGLTGVM 445
Query: 530 LANSSIDITLHDTYYVVA 583
+A D HD+Y++VA
Sbjct: 446 VAVIPFDWQAHDSYFIVA 463
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 109 bits (263), Expect = 4e-23
Identities = 61/168 (36%), Positives = 90/168 (53%)
Frame = +2
Query: 80 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 259
+L +R + FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+ +
Sbjct: 224 LLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTIL-PVMARTGL 282
Query: 260 FXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 439
F + HH+FT GI A+F++A+ ++AVPT +++F + T+
Sbjct: 283 LGYGWIVAAAVALGVLSFGLWVHHMFTTGIPHLGLAFFSAASTLVAVPTAVQLFIWIGTL 342
Query: 440 HGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 583
+ +L L F F +GGLTGV++A D +HDTY++VA
Sbjct: 343 AKGAPRLHLPMLWLLAFFATFVIGGLTGVMVAIVPFDWQVHDTYFIVA 390
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 109 bits (262), Expect = 5e-23
Identities = 52/66 (78%), Positives = 54/66 (81%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLF+ AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP
Sbjct: 155 PLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHP 214
Query: 182 EVYILI 199
EVYILI
Sbjct: 215 EVYILI 220
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 108 bits (260), Expect = 8e-23
Identities = 52/133 (39%), Positives = 83/133 (62%)
Frame = +2
Query: 185 VYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTR 364
VY++ILP FG++SH + + G + + V AHH+FTVG+D+DTR
Sbjct: 1 VYVIILPVFGLVSHSLHRG-GLFSLYNMLGMVYAMIAIAVVGYFVWAHHMFTVGLDVDTR 59
Query: 365 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 544
YF+SAT++IA+PT IK+F + + + + + F+ +F +GG+TG++LANS
Sbjct: 60 VYFSSATLLIALPTSIKVFSWMVGLRRMALASSAAWY-VVAFLLMFLLGGVTGLVLANSE 118
Query: 545 IDITLHDTYYVVA 583
+D+ +HD+YYVVA
Sbjct: 119 VDLVMHDSYYVVA 131
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 107 bits (258), Expect = 1e-22
Identities = 57/172 (33%), Positives = 90/172 (52%)
Frame = +2
Query: 65 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 244
A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P G++ ++ +
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMVPR-F 263
Query: 245 GKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR 424
+K + F AHH+F G+ + F T+ + + +F
Sbjct: 264 SRKPIYSYNSGLFAFVLLTIVGFSSWAHHMFATGMSFTEKTVFMLGTLAAVPASAMHVFN 323
Query: 425 *LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVV 580
+AT+ +I ++ ++ +G + LF G GV+ A +D T HDTY+VV
Sbjct: 324 FVATMWNGRIRFDSPMMWSIGGIALFFSAGAGGVLNAAMPLDFTTHDTYWVV 375
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 107 bits (257), Expect = 2e-22
Identities = 63/169 (37%), Positives = 91/169 (53%), Gaps = 1/169 (0%)
Frame = +2
Query: 80 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 259
+L +R FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+ + E
Sbjct: 224 LLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL-PVMARTEL 282
Query: 260 FXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 439
F + HH+FT GI A F++A+ ++AVPT +++F + T+
Sbjct: 283 IGYRWVVAAAISLAVLSFGLWVHHMFTTGIPHMGLALFSAASTLVAVPTAVQLFAWIGTL 342
Query: 440 -HGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 583
GT P ++ L F F +GGLTGV++A D +HDT+++VA
Sbjct: 343 WRGTPEMRLP-MMWILAFFATFVIGGLTGVMVAVVPFDWQVHDTHFIVA 390
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 101 bits (243), Expect = 9e-21
Identities = 48/62 (77%), Positives = 51/62 (82%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLFV AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP
Sbjct: 179 PLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHP 238
Query: 182 EV 187
++
Sbjct: 239 KL 240
Score = 43.6 bits (98), Expect = 0.004
Identities = 37/104 (35%), Positives = 40/104 (38%)
Frame = +3
Query: 204 QDLV*FLILFHXXXXXXXXXXXXXXFMLY*QLGY*DLLFEXXXXXXXXXXXXXXXXXXXX 383
QDLV F +LF FM L Y DLLFE
Sbjct: 246 QDLVSFHMLFPKKVEKSKLLVVSVSFMQSWLLVYSDLLFELIMYLPSESMLKLELVLHQQ 305
Query: 384 XXXXXXXXXXKFLDD*LQYMELKLIITLIFYED*VLYFYSQ*ED 515
KFL D +MELKLI+ L FYED L FY Q ED
Sbjct: 306 LSLLLSQLGLKFLVDWQPFMELKLIMVLQFYEDWDLCFYLQSED 349
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 99.5 bits (237), Expect = 5e-20
Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPIL 148
P+F ++ +T + A+ IL +D L T++F D G +L
Sbjct: 193 PIFSLSINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASLL 252
Query: 149 YQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AH 328
+ HLF FFGHPEVYI+ P G+++ G++ F+V H
Sbjct: 253 WAHLFWFFGHPEVYIVFFPALGVMAECFQTFTGRR-LVGRKWFIISMVLVALQSFVVWMH 311
Query: 329 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 508
H+F GI++ + F + TI I++P + +F + T+ ++ + L LG + LF +
Sbjct: 312 HMFLTGINLPIKTIFMATTIGISLPFDLMVFSLIYTMAKGRVRFTTPFLFSLGALILFII 371
Query: 509 GGLTGVILANSSIDITLHDTYYVVA 583
GG+TGV L +D TY+VVA
Sbjct: 372 GGITGVFLGAIVLDYQFRGTYWVVA 396
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 97.1 bits (231), Expect = 3e-19
Identities = 45/55 (81%), Positives = 50/55 (90%)
Frame = +2
Query: 350 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 514
D+DTRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY P++L LGFVFLFTVGG
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTPSLLWALGFVFLFTVGG 55
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 95.9 bits (228), Expect = 6e-19
Identities = 45/88 (51%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Frame = +2
Query: 323 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGT-QINYNPNIL*RLGFVFL 499
AHH+ TVG++ DTRAYF++ TI+IA+PTG KIF L T + ++ L F+ L
Sbjct: 2 AHHMMTVGLEGDTRAYFSAMTIMIAIPTGTKIFNWLGTYMASHNTTRTIDLWAALCFILL 61
Query: 500 FTVGGLTGVILANSSIDITLHDTYYVVA 583
FT+GG TGV++ N+ +DI LHDTYY+VA
Sbjct: 62 FTLGGTTGVVMGNAGMDIALHDTYYIVA 89
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 93.9 bits (223), Expect = 3e-18
Identities = 44/86 (51%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Frame = +2
Query: 332 IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ--INYNPNIL*RLGFVFLFT 505
++T G+++DTRA+FTS TI+I++PTG K+F L T T I ++ ++L L F+ FT
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMSTNFGITHSSSLL-SLLFICTFT 59
Query: 506 VGGLTGVILANSSIDITLHDTYYVVA 583
GG TGVIL N +ID+ LHDTYYV+A
Sbjct: 60 FGGTTGVILGNGAIDVALHDTYYVIA 85
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 89.0 bits (211), Expect = 7e-17
Identities = 43/59 (72%), Positives = 45/59 (76%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 178
PLFV AV ITA AGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 101 PLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
Score = 54.0 bits (124), Expect = 2e-06
Identities = 34/72 (47%), Positives = 37/72 (51%)
Frame = +2
Query: 368 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 547
Y SA P G+K F + + G P I F GGLTGVILANSS
Sbjct: 223 YLXSAXXFXXGPPGVK-FLGDSYLSGNFNFXKPQIFMIFSIYFSIHGGGLTGVILANSSX 281
Query: 548 DITLHDTYYVVA 583
DI LHDTYYVVA
Sbjct: 282 DIILHDTYYVVA 293
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 85.0 bits (201), Expect = 1e-15
Identities = 40/93 (43%), Positives = 52/93 (55%)
Frame = +2
Query: 167 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 346
FFGHPEVY+LILP FGI+SHI F +V AHH+F VG
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFGYYGLVLAMLAIVCLGSVVWAHHMFMVG 60
Query: 347 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 445
D+ T +F+S T++I +PTGIK+F L + G
Sbjct: 61 YDVHTAVFFSSVTMVIGIPTGIKVFSWLIMLGG 93
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 84.2 bits (199), Expect = 2e-15
Identities = 58/194 (29%), Positives = 91/194 (46%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLFV AV A G +LL ++ S++ GG +++++LF +FGHP
Sbjct: 212 PLFVWAVFWVAAISWFVFPEITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHP 270
Query: 182 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 361
EVY+L+LPG G + +S + + +V HH F GI
Sbjct: 271 EVYLLLLPGTGAMFDYLS-NLNHRPPYLKKWMIAAMGAISVDSVMVFLHHTFMTGIVFAW 329
Query: 362 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 541
+ T I++PT + I +AT+ G + + IL L F +GG++GV ++
Sbjct: 330 LMADSIFTETISIPTSMLIVGLIATMIGGRHKFQTPILFALAASTSFMIGGVSGVTQSSL 389
Query: 542 SIDITLHDTYYVVA 583
+ID +H YYVVA
Sbjct: 390 AIDTIVHGDYYVVA 403
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 79.8 bits (188), Expect = 4e-14
Identities = 37/54 (68%), Positives = 41/54 (75%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 163
PLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 182 PLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 78.2 bits (184), Expect = 1e-13
Identities = 50/158 (31%), Positives = 71/158 (44%)
Frame = +2
Query: 110 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 289
S F G P+ Y F F HPEVY+ ILP F I I+ K+ F
Sbjct: 311 SHFYTGPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEILPAA-AKRPLFARGWAIAGL 369
Query: 290 XXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 469
+ HH FT D + T T +++PTG + TI G ++ N
Sbjct: 370 VGVSMSGAMSGVHHYFTAVSDARMPIFMT-ITETVSIPTGFIYLSAIGTIWGGRLRINAA 428
Query: 470 IL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 583
+L L + F +GGLTG+ A+ D+ LH+TY+V+A
Sbjct: 429 VLLVLMAMMNFLIGGLTGIFNADVPADLQLHNTYWVIA 466
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 78.2 bits (184), Expect = 1e-13
Identities = 38/53 (71%), Positives = 40/53 (75%)
Frame = +2
Query: 5 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 163
LFV +V ITA AGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 166 LFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 77.0 bits (181), Expect = 3e-13
Identities = 37/54 (68%), Positives = 43/54 (79%)
Frame = -3
Query: 162 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKG 1
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSG 53
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 75.4 bits (177), Expect = 9e-13
Identities = 36/67 (53%), Positives = 45/67 (67%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG
Sbjct: 183 PLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQT 242
Query: 182 EVYILIL 202
I++L
Sbjct: 243 VATIIML 249
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 73.7 bits (173), Expect = 3e-12
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = +1
Query: 154 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLS 324
+ ++IFW+S SLYFN IWYNF YY+T K K W F NNLCY S W I +S
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 71.7 bits (168), Expect = 1e-11
Identities = 34/58 (58%), Positives = 40/58 (68%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 175
PLFV A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 183 PLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 68.9 bits (161), Expect = 8e-11
Identities = 34/67 (50%), Positives = 42/67 (62%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLF AV TA A +T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HP
Sbjct: 188 PLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHP 247
Query: 182 EVYILIL 202
EV I+ L
Sbjct: 248 EVKIICL 254
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 68.9 bits (161), Expect = 8e-11
Identities = 35/69 (50%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH- 178
PLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG
Sbjct: 200 PLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGQI 259
Query: 179 -PEVYILIL 202
P + I+I+
Sbjct: 260 WPIIIIIII 268
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 63.3 bits (147), Expect = 4e-09
Identities = 31/59 (52%), Positives = 34/59 (57%)
Frame = +1
Query: 1 TLICMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 177
T ICM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 94 TFICMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 62.5 bits (145), Expect = 7e-09
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Frame = +2
Query: 314 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL-*RLGF 490
+V HH+F VG D+ T +F+S T+II VPTGIK+F L + ++ N I+ +GF
Sbjct: 26 VVWLHHMFMVGFDVKTAVFFSSVTMIIGVPTGIKVFGWLYMLGTSRHCLNTVIVWWIIGF 85
Query: 491 VFLFTVGGLTG 523
+FLFT+GG G
Sbjct: 86 IFLFTMGGRQG 96
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 61.7 bits (143), Expect = 1e-08
Identities = 36/72 (50%), Positives = 45/72 (62%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 181
PLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+ F+ +P
Sbjct: 200 PLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYKNP 257
Query: 182 EVYILILPGFGI 217
V ILI GI
Sbjct: 258 -VLILIWLTSGI 268
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 57.6 bits (133), Expect = 2e-07
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
Frame = +2
Query: 167 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 346
FFGHP VY + P FG + + I K+ F ++ HH+ T
Sbjct: 2 FFGHPVVYYVPFPLFGALYYYI-PIYAKRSLFSEKWARWNIFLLAIGSMLIWVHHLQTFP 60
Query: 347 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL-----FTVG 511
+ +D RA+ T +T+++A +G+ + TI T Y+ LG FL F +G
Sbjct: 61 LPVDLRAWITVSTLVLASGSGLTVLNLGLTIL-TSKGYDYKD--PLGMTFLIALIGFIIG 117
Query: 512 GLTGVILANSSIDITLHDTYYVV 580
G+ + L + I+ +H+TYYVV
Sbjct: 118 GVQALPLPINIINGVVHNTYYVV 140
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 56.8 bits (131), Expect = 4e-07
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +2
Query: 326 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 475
HH+FTVG+D++T +F+S T+II VPTGIK+F L + +++N IL
Sbjct: 53 HHMFTVGLDVNTAVFFSSVTMIIRVPTGIKVFTWLYMLSNSRVNKXDPIL 102
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 54.8 bits (126), Expect = 1e-06
Identities = 23/30 (76%), Positives = 29/30 (96%)
Frame = +2
Query: 332 IFTVGIDIDTRAYFTSATIIIAVPTGIKIF 421
++ VG+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 54.0 bits (124), Expect = 2e-06
Identities = 29/66 (43%), Positives = 37/66 (56%)
Frame = +2
Query: 5 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 184
LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ FGH +
Sbjct: 16 LFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFGHTD 75
Query: 185 VYILIL 202
V LIL
Sbjct: 76 VLFLIL 81
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 52.8 bits (121), Expect = 6e-06
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 3/149 (2%)
Frame = +2
Query: 143 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 322
+L+ LF F+GHP VY + P FG + + I Q G + + V
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAG-RSLYSEKWARWNIYLLAIGTMGVW 282
Query: 323 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY---NPNIL*RLGFV 493
HH+ T + I R + +T+I+A +G+ + TI T Y +P + L +
Sbjct: 283 VHHLQTWPLPIVLREWVNLSTLILATGSGLTVLNLGLTIF-TSRKYDWKDPVGMGALISL 341
Query: 494 FLFTVGGLTGVILANSSIDITLHDTYYVV 580
F + G ++L +SI+ H++YYVV
Sbjct: 342 IGFILAGAQALVLPENSINPLFHNSYYVV 370
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 50.8 bits (116), Expect = 2e-05
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +2
Query: 353 IDTRAYFTSATIIIAVPTGIKIFR*LAT 436
+DTRAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLAT 29
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/41 (60%), Positives = 27/41 (65%)
Frame = +2
Query: 2 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 124
PLFV AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 171 PLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +1
Query: 13 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 165
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1;
Caldivirga maquilingensis IC-167|Rep: Cytochrome-c
oxidase precursor - Caldivirga maquilingensis IC-167
Length = 529
Score = 47.2 bits (107), Expect = 3e-04
Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 1/159 (0%)
Frame = +2
Query: 110 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 289
S +P G + L ++F FFGHP VY L+ P + +++ + ++
Sbjct: 242 STVNPNFGINVGLADNMFWFFGHPIVYQLLFPAVAAL-YLLFELGSNRDWLGYTVTGAIW 300
Query: 290 XXXXXXXFIV*AHHIFTVGID-IDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP 466
+V HH++ + + +T+ I++ + + +F LA + + I P
Sbjct: 301 VLATVTNLLVWVHHLYLYPFEPLPVNLMSQLSTMGISIVSAVSVFALLAMMWRSGIKMTP 360
Query: 467 NIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 583
+ L +F + G +GV A + ++ LH+T +VVA
Sbjct: 361 PYMFSLIAMFAWLEAGYSGVAQAIVAWNLYLHNTLWVVA 399
>UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal
oxidase; n=8; Sulfolobaceae|Rep: Heme bearing subunit I
of the terminal oxidase - Sulfolobus solfataricus
Length = 593
Score = 46.8 bits (106), Expect = 4e-04
Identities = 36/150 (24%), Positives = 59/150 (39%)
Frame = +2
Query: 131 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXX 310
G DPI Q F FGH VY+ +P G + +++ K +
Sbjct: 233 GLDPIANQIAFWIFGHAIVYMAWVPAVGAL-YLLIPMLANKPLYSDRMGRISALLYLIFS 291
Query: 311 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGF 490
V HH++ V + I + T + +P+ + F AT G + +N +
Sbjct: 292 NNVPIHHLYMVNLPIALKLLQEVLTYSVVIPSMMTFFNLWATAKGADVKWNIITAWTVTS 351
Query: 491 VFLFTVGGLTGVILANSSIDITLHDTYYVV 580
G+TG+ A S D +H+T +VV
Sbjct: 352 FAGAIAAGVTGISNATISFDAIVHNTDWVV 381
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 46.0 bits (104), Expect = 7e-04
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +1
Query: 154 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLSSSY 333
T ILI W S+Y F IW +F+ T FW+ N L + SNW I C+S +
Sbjct: 1 TPILILWPPSSIYSYFAGIWNDFARNRTLFSNASTFWVPGNGLRHDSNWSPSIPCMSPPH 60
Query: 334 IH 339
+H
Sbjct: 61 VH 62
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 45.6 bits (103), Expect = 9e-04
Identities = 32/100 (32%), Positives = 46/100 (46%)
Frame = +1
Query: 1 TLICMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS 180
T I M +Y+ TT S S +N N SKL++I+ S PN I ILI T
Sbjct: 86 TSILMKNPNYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTP 145
Query: 181 *SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNW 300
L+ N T I ++ +K N ++NNL ++ W
Sbjct: 146 SGLHSNSTSIRNRITHLHNIFSQKSNILYYKNNLRHSIYW 185
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 42.7 bits (96), Expect = 0.006
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = -3
Query: 447 VPCIVASHLKILIPVGTAIIIVAEVKYARVSISIPTVNI**AQT 316
VP + +H K LIPVGT +I+V E+K V S PTVN+ AQT
Sbjct: 51 VPASMYNHEKTLIPVGTPMIMVTELKKTAVPKSSPTVNMWWAQT 94
>UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit I;
n=1; Aeropyrum pernix|Rep: Cytochrome c oxidase
(Ba3-type) subunit I - Aeropyrum pernix
Length = 548
Score = 39.9 bits (89), Expect = 0.043
Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 16/164 (9%)
Frame = +2
Query: 137 DPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI 316
D +L + LF +FGHP VY +LP + + I + G F
Sbjct: 207 DVLLARTLFWWFGHPLVYFWLLPAVALWYYAIPRILG-VPLFSETMAKVAYILYMIASTP 265
Query: 317 V*AHHIFT-VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGTQINYNPNIL----- 475
V HH F GI + T T ++A P+ + F LAT+ ++ ++
Sbjct: 266 VGLHHQFVDPGIGPFFKLVHTLVTFVVATPSMLTAFNILATLERAGRMRGGRGLVGWVFK 325
Query: 476 ---*RLGF------VFLFTVGGLTGVILANSSIDITLHDTYYVV 580
L F + LF GG+TG+I A+ ++ +H+T ++V
Sbjct: 326 LPWGSLAFSGLMLPIILFANGGITGIINASFQLNTVVHNTTWIV 369
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 39.1 bits (87), Expect = 0.076
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +1
Query: 418 F*MTSYNTWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQFFXXXXXXXXLLCSS 582
F MT Y +W++N L P + FC FI+ N +FSQF LLC S
Sbjct: 24 FLMTCYPSWDTNLLHPSPPLSFSFCFFIYRWSFNSGSFSQFLNWYYSTWYLLCCS 78
>UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3;
Pyrobaculum|Rep: Cytochrome C oxidase subunit I -
Pyrobaculum aerophilum
Length = 557
Score = 38.7 bits (86), Expect = 0.100
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 17/165 (10%)
Frame = +2
Query: 137 DPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI 316
D + ++ F FFGHP VY ++P I I+ + G E F
Sbjct: 206 DVLEWRLWFWFFGHPLVYFWLVPAVTIWYTILPRVLG-TEVFSKTAAKAAFMLYLIASVP 264
Query: 317 V*AHHIFT-VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG--------------TQ 451
V HH F G+ + T T ++AVP+ I F +AT+ T
Sbjct: 265 VGLHHQFVDPGVHPVYKYLHTVLTYLVAVPSFITAFNVIATLEKAGRMRGGKGLFGWITA 324
Query: 452 INYNPN-IL*RLGF-VFLFTVGGLTGVILANSSIDITLHDTYYVV 580
+ + + + + F + LF + G +GV+ A+ +++ +H+T +VV
Sbjct: 325 LPWGKDPVFTGITFAIILFGIAGFSGVVNASFNVNYNVHNTAWVV 369
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 37.1 bits (82), Expect = 0.30
Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 16/165 (9%)
Frame = +2
Query: 131 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXX 310
G DP+L + LF F GHP VY +LP + + + Q+ G + F
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAGGR-LFSDPMARVSFILFLILS 282
Query: 311 FIV*AHHIFT-VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGTQIN--------- 457
+ HH +T GI + T + P+ + F +A++ +G +
Sbjct: 283 TPIGMHHQYTDPGISEIWKLVHAIFTFGVFFPSLLTFFNVVASLENGGRARGGKGWLVWV 342
Query: 458 YN-----PNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYV 577
+N P+ ++ + LF GG G+I A+ +I++ +H+T ++
Sbjct: 343 FNLPWREPSFTTQVLAMILFAFGGAGGLINASYNINLVVHNTSWI 387
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 36.3 bits (80), Expect = 0.53
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 25/172 (14%)
Frame = +2
Query: 137 DPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK-ETFXXXXXXXXXXXXXXXXF 313
+P+L + LF FFGHP VY +LP + + I+ + +K + +
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGKLYSDPAARLAFILFLIFSL 268
Query: 314 IV*AHHIFT-VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI------ 472
V HH FT GI + T +A+P+ I F ++ + +P +
Sbjct: 269 PVGLHHQFTDPGITNTWKLIHALFTFGVALPSMITAFTVATSLEYSVKAEHPELKNSKFY 328
Query: 473 ------L*RL-GFVFLFT----------VGGLTGVILANSSIDITLHDTYYV 577
RL G ++F+ +GG+TG++ A+ ++++ +H+T YV
Sbjct: 329 WWTFLPFMRLEGNKWMFSYFFAGLVLFFIGGITGIVNASYNVNLVVHNTAYV 380
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 1.6
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 179 PEVYILILPGFGIISHIISQERGKK 253
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2;
Cryptosporidium|Rep: Cation-transporting ATPase -
Cryptosporidium parvum Iowa II
Length = 1434
Score = 32.7 bits (71), Expect = 6.6
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 157 FILIFWT--S*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLSSS 330
+I+ FW+ S SLYFN + N + T KK N L + +C+ + + S +
Sbjct: 558 YIIPFWSTSSMSLYFNNAIKYLNSEHILTTNPKKLNQLLLVDTICFDKTGTLTVPTFSIN 617
Query: 331 YIH 339
+H
Sbjct: 618 NVH 620
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 32.7 bits (71), Expect = 6.6
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -3
Query: 150 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAH 13
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 32.3 bits (70), Expect = 8.7
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +2
Query: 26 ITAFXXXXXXXXXAGAITILLTDRNLNT 109
ITA AGAIT+LLTDRN+NT
Sbjct: 174 ITAVLLLLSLPVLAGAITMLLTDRNMNT 201
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 403,854,961
Number of Sequences: 1657284
Number of extensions: 7312645
Number of successful extensions: 17062
Number of sequences better than 10.0: 118
Number of HSP's better than 10.0 without gapping: 16321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16928
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40820699206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -