Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0792
         (497 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   6.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.1  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 439 YQVIPVGLQNGLG 477
           YQV+P GL+  +G
Sbjct: 424 YQVLPFGLKTAVG 436


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 203 KCAVFSDEKSPI*LCYYFFVKIVRTCL 283
           +CA    E  P  +CYY F   + T L
Sbjct: 107 ECARACREGEPPRICYYHFTLELYTVL 133


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 203 KCAVFSDEKSPI*LCYYFFVKIVRTCL 283
           +CA    E  P  +CYY F   + T L
Sbjct: 107 ECARACREGEPPRICYYHFTLELYTVL 133


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,675
Number of Sequences: 336
Number of extensions: 2304
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)