Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0792
         (497 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    24   2.5  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   5.8  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           23   7.6  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -1

Query: 86  FKYF*ITIDWSSYGCSTAHDPRADSCSP 3
           +  F + + W +Y   T + PR   C+P
Sbjct: 582 YMVFMMFMKWIAYTAKTDYQPRTPGCAP 609


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -2

Query: 58  GLHTVAPPRTILVPIP 11
           G    APP TILVP P
Sbjct: 618 GFGGAAPPVTILVPYP 633


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 61 TGLHTVAPPRTILVPIPA 8
          T +H   PP  +LVPIP+
Sbjct: 23 TQVHPSQPPVPMLVPIPS 40


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,938
Number of Sequences: 2352
Number of extensions: 10101
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)