Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0792
         (497 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    24   1.0  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   4.1  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   5.4  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   7.1  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 210 RYFQMKNPQSNFVIIFL 260
           RY + +NP++NF  IFL
Sbjct: 407 RYTRCENPKTNFFSIFL 423


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 337 WYMSAPVGECDHC 375
           WYMS  +G  D C
Sbjct: 298 WYMSTEIGSRDLC 310


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 219 ENTAHFTGTGYSSTDYSGHIRNL 151
           E ++ +TG G  STD+ G   +L
Sbjct: 376 EVSSTYTGFGIQSTDFVGDCSSL 398


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -2

Query: 412 IGTECQWNHHVDSNDHTPPPGLTCTIFLLFL*KMRPVYKQTDLQACSDNF 263
           I  E + +  + S D+T P G T  I    L +   +Y   D+    DNF
Sbjct: 417 IAREIKTDLKLASGDYTIPAGCTVVIGTFKLHRQPHIYPNPDV-FDPDNF 465


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,018
Number of Sequences: 438
Number of extensions: 2930
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)