Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0791
         (526 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0349 - 3082700-3083407                                           30   1.3  
08_01_0052 + 361505-361969,362270-362348,362816-362880,363069-36...    29   3.0  
05_01_0372 - 2913518-2916562,2916674-2917528                           28   4.0  
08_01_0350 - 3087631-3088461                                           28   5.3  
07_01_0548 - 4061829-4062956                                           27   9.2  
03_02_0693 - 10441253-10441294,10441404-10441511,10441594-104416...    27   9.2  

>08_01_0349 - 3082700-3083407
          Length = 235

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +2

Query: 305 AKLATSVFAIVLFFLGNFGITAGAHRLWSHNGYKVKLPL 421
           A+L+   FAI++ FL  F +   + R +SH G  V +PL
Sbjct: 104 AELSVKFFAILVCFLLAFLLNVQSIRYYSHTGLLVNVPL 142


>08_01_0052 +
           361505-361969,362270-362348,362816-362880,363069-363236,
           363731-364171
          Length = 405

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -1

Query: 151 FICFIH*IRRHFSNLDFNFIYLL*VI*FYNTKYLLKKFCSEQYFFLV 11
           F+C +  +R H  NLD  F        F +  Y L++FCS  +  L+
Sbjct: 159 FVCVVWYLRSHLFNLDLQFF-------FNHVVYRLQQFCSTFFLQLI 198


>05_01_0372 - 2913518-2916562,2916674-2917528
          Length = 1299

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +3

Query: 306 QNWLHRFLLLCYSS 347
           Q+W H+ LLLCYSS
Sbjct: 855 QSWRHQMLLLCYSS 868


>08_01_0350 - 3087631-3088461
          Length = 276

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 311 LATSVFAIVLFFLGNFGITAGAHRLWSHNGYKVKLPL 421
           L+   FAI++ FL  F +   + R +SH G  V +PL
Sbjct: 126 LSIKFFAILVCFLVAFLLNVQSIRYYSHTGILVNVPL 162


>07_01_0548 - 4061829-4062956
          Length = 375

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 116 KMPPNSVDKTNETEYLKDNHVDYE 187
           ++PP   DK  +  +L DNH D+E
Sbjct: 180 EVPPAIFDKKIDALFLNDNHFDFE 203


>03_02_0693 -
           10441253-10441294,10441404-10441511,10441594-10441677,
           10441765-10443062,10443111-10444804,10444890-10444957,
           10445057-10445186,10445292-10445415,10445551-10445711,
           10446714-10446868
          Length = 1287

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 119 MPPNSVDKTNETEYLKDNHVDYEKLIAPQASPI 217
           M PNS D     E   D+H  Y  + +PQA P+
Sbjct: 394 MVPNSSDVVPAEEENNDHHQGYVCVPSPQAKPV 426


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,134,004
Number of Sequences: 37544
Number of extensions: 240712
Number of successful extensions: 514
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1154538620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)