Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0791
         (526 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to ...    56   1e-08
At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to ...    54   4e-08
At1g06360.1 68414.m00672 fatty acid desaturase family protein si...    53   1e-07
At1g06350.1 68414.m00671 fatty acid desaturase family protein si...    52   2e-07
At1g06100.1 68414.m00639 fatty acid desaturase family protein si...    50   1e-06
At3g15850.1 68416.m02005 fatty acid desaturase family protein si...    49   2e-06
At3g15870.1 68416.m02007 fatty acid desaturase family protein si...    48   5e-06
At1g06090.1 68414.m00638 fatty acid desaturase family protein si...    47   7e-06
At1g06120.1 68414.m00641 fatty acid desaturase family protein si...    46   2e-05
At5g41180.1 68418.m05005 leucine-rich repeat protein kinase, put...    27   5.8  
At5g41880.1 68418.m05099 DNA primase small subunit family contai...    27   7.7  
At4g17140.1 68417.m02580 pleckstrin homology (PH) domain-contain...    27   7.7  
At1g78420.1 68414.m09138 expressed protein                             27   7.7  
At1g61080.1 68414.m06877 proline-rich family protein                   27   7.7  

>At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to
           delta 9 acyl-lipid desaturase (ADS1) GB:BAA25180
           GI:2970034 from [Arabidopsis thaliana]
          Length = 305

 Score = 56.0 bits (129), Expect = 1e-08
 Identities = 24/66 (36%), Positives = 35/66 (53%)
 Frame = +2

Query: 329 AIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKY 508
           A++++ +G  GIT   HR  +H  +KV   LE        +A Q     WV  HR HH++
Sbjct: 67  ALIVYTVGGLGITVSYHRNLAHRSFKVPKWLEYFFAYCGLLAIQGDPIDWVSTHRYHHQF 126

Query: 509 TDTDAD 526
           TD+D D
Sbjct: 127 TDSDRD 132


>At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to
           delta 9 acyl-lipid desaturase (ADS2) GI:2970036 from
           [Arabidopsis thaliana]
          Length = 307

 Score = 54.4 bits (125), Expect = 4e-08
 Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
 Frame = +2

Query: 317 TSVFAIVLFF-LGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHR 493
           ++++   LF+ +G  GIT   HR  +H  +KV   LE LL     +A Q     WV  HR
Sbjct: 64  SALWVTFLFYTIGGLGITVSYHRNLAHRSFKVPKWLEYLLAYCALLAIQGDPIDWVSTHR 123

Query: 494 LHHKYTDTDAD 526
            HH++TD++ D
Sbjct: 124 YHHQFTDSERD 134


>At1g06360.1 68414.m00672 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 299

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 26/67 (38%), Positives = 34/67 (50%)
 Frame = +2

Query: 326 FAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHK 505
           F  VL+ L +  IT   HR  +H  +K+   LE  L  F   A Q     WV  HR HH+
Sbjct: 60  FGFVLYALTSLSITFSYHRNLAHRSFKLPKWLEYPLAYFAVFALQGDPLDWVSIHRFHHQ 119

Query: 506 YTDTDAD 526
           +TD+D D
Sbjct: 120 FTDSDRD 126


>At1g06350.1 68414.m00671 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 300

 Score = 52.0 bits (119), Expect = 2e-07
 Identities = 33/98 (33%), Positives = 45/98 (45%)
 Frame = +2

Query: 233 VMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWSHNGYKVK 412
           +++V+R S + I     L   F + K     F +VLF L    IT   HR  SH  +K+ 
Sbjct: 31  LVDVVRASVVVIVHFLCLLAPF-NFKWEALRFGLVLFALTTLSITFSFHRNLSHRSFKIP 89

Query: 413 LPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDAD 526
             LE         A Q     WV  HR HH++TD+D D
Sbjct: 90  KWLEYPWAYSAVFALQGDPMDWVSIHRFHHQFTDSDRD 127


>At1g06100.1 68414.m00639 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 299

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 25/67 (37%), Positives = 33/67 (49%)
 Frame = +2

Query: 326 FAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHK 505
           F I+L  L N  IT   HR  +H  +K+   LE        +A Q     WV  HR HH+
Sbjct: 60  FGIILAILTNLCITFSYHRNLTHRSFKLPKWLEYPFAYSALLALQGDPLDWVSIHRFHHQ 119

Query: 506 YTDTDAD 526
           +TD+D D
Sbjct: 120 FTDSDRD 126


>At3g15850.1 68416.m02005 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 371

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 26/71 (36%), Positives = 33/71 (46%)
 Frame = +2

Query: 314 ATSVFAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHR 493
           A SV   +    G  GIT   HR  SH  +K+   LE L     + A Q     WV  HR
Sbjct: 127 AVSVAFGLYIVTGLLGITLSFHRNLSHKAFKLPKWLEYLFAYCGAQALQGNPIDWVSTHR 186

Query: 494 LHHKYTDTDAD 526
            HH++ D+D D
Sbjct: 187 YHHQFCDSDRD 197


>At3g15870.1 68416.m02007 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 292

 Score = 47.6 bits (108), Expect = 5e-06
 Identities = 23/63 (36%), Positives = 30/63 (47%)
 Frame = +2

Query: 338 LFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDT 517
           L F+    IT   HR  SH  + +   LE L      +AFQ     WV +HR HHK+ +T
Sbjct: 58  LVFINGICITLSYHRNLSHRSFDLPKWLEYLFAYGGVLAFQGDPIEWVSNHRYHHKHCET 117

Query: 518 DAD 526
             D
Sbjct: 118 QRD 120


>At1g06090.1 68414.m00638 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase GB:BAA25180
           GI:2970034 (ADS1) from [Arabidopsis thaliana]
          Length = 299

 Score = 47.2 bits (107), Expect = 7e-06
 Identities = 22/67 (32%), Positives = 32/67 (47%)
 Frame = +2

Query: 326 FAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHK 505
           F ++L  + +  IT   HR  +H  +K+   LE         A Q     WV  HR HH+
Sbjct: 60  FGVILAIVTSLSITFSYHRNLTHKSFKLPKWLEYPFAYSALFALQGHPIDWVSTHRFHHQ 119

Query: 506 YTDTDAD 526
           +TD+D D
Sbjct: 120 FTDSDRD 126


>At1g06120.1 68414.m00641 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase GB:BAA25180
           GI:2970034 (ADS1) from [Arabidopsis thaliana]; supported
           by cDNA:gi_12083275_gb_AF332434.1_AF332434
          Length = 299

 Score = 45.6 bits (103), Expect = 2e-05
 Identities = 23/67 (34%), Positives = 31/67 (46%)
 Frame = +2

Query: 326 FAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHK 505
           FA ++    N  IT   HR  +H  +K+   LE         A Q     WV  HR HH+
Sbjct: 60  FAAMVGISTNLSITFSYHRNLTHRSFKLPKWLEYPFAYSALFALQGHPIDWVSTHRFHHQ 119

Query: 506 YTDTDAD 526
           +TD+D D
Sbjct: 120 FTDSDRD 126


>At5g41180.1 68418.m05005 leucine-rich repeat protein kinase,
           putative contains leucine rich repeat (LRR) domains,
           Pfam:PF00560; contains protein kinase domain,
           Pfam:PF00069
          Length = 664

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 303 QQNWLHRFLLLCYSSLGTLVLQLELIVCGLIMVTKS 410
           +Q WL  F ++  SS+G L L +    C L  + +S
Sbjct: 273 RQTWLRNFEIVTGSSVGLLFLVVMFSACSLCKIKRS 308


>At5g41880.1 68418.m05099 DNA primase small subunit family contains
           Pfam profile: PF01896 DNA primase small subunit
          Length = 407

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -1

Query: 259 IAKTYHVHHYNFVFDGRGLGCNEFF 185
           I   ++VH+    +DG+  GC+E++
Sbjct: 22  IENDFNVHYLRIYYDGKHPGCDEYY 46


>At4g17140.1 68417.m02580 pleckstrin homology (PH) domain-containing
           protein contains Pfam profile PF00169: PH domain
          Length = 1322

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 332 IVLFFLGNFGITAGAHRLWSH 394
           + LFFL + G     HRLW H
Sbjct: 277 LYLFFLTDAGFLRNLHRLWKH 297


>At1g78420.1 68414.m09138 expressed protein
          Length = 401

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 430 VDGLQQYCFSEHHFHMGERSQATSQV 507
           VDG+  +    HH+ MGE   + S V
Sbjct: 322 VDGIDNHHHHRHHYEMGETGSSNSYV 347


>At1g61080.1 68414.m06877 proline-rich family protein 
          Length = 907

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = +2

Query: 71  LNNL**VDKIEI*ITKMPPNSVDKTNETEYLKDNHVDYEKLIAPQASPIKHKIV 232
           LN L  +DK+E   TK+    VD ++    L       EKL++P A P   K V
Sbjct: 810 LNQL--LDKVERYFTKIKETMVDISSNCMELALKEKRDEKLVSPDAKPSLKKTV 861


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,863,158
Number of Sequences: 28952
Number of extensions: 207840
Number of successful extensions: 480
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 480
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 967280384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)