Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0788
         (619 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    23   2.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.7  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   3.6  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   6.3  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   6.3  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.3  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   8.3  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +1

Query: 238 NKTDLLIDRKAEVRGRQEVDEES*RLSSV 324
           +K D+  D+KA  + R+EV++    LSSV
Sbjct: 76  HKKDIRADKKALQKLRREVEKAKRDLSSV 104


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 513 YTS*KCQQRMKTCSSHHCL 569
           +T   CQ R+  C S  CL
Sbjct: 53  FTGSNCQNRINLCDSSPCL 71


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 149 KTLNFTFSKGHVGLRF 102
           +T+NF FS G + LRF
Sbjct: 387 QTINFMFSFGFILLRF 402


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/37 (24%), Positives = 16/37 (43%)
 Frame = +3

Query: 36  GYLYSNSNSGKRYLWWDKPTSKKPKTYMAFRKRKIQG 146
           G++   +N    Y+ W K    KP      +K ++ G
Sbjct: 480 GWVTDGNNWCSPYIGWQKVYENKPAKIAGDKKGQVLG 516


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 79  HKYRFPEFELEYKYP 35
           ++Y F  F+L+++YP
Sbjct: 133 NQYEFDGFDLDWEYP 147


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 362 ADTSLSSSSPAHTTELSRQLSSSTSCRPRTSAFLS 258
           A  + SSSSP+ ++      S+STS   R   ++S
Sbjct: 31  APAAYSSSSPSGSSPQHSSSSASTSPAARMYPYVS 65


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 362 ADTSLSSSSPAHTTELSRQLSSSTSCRPRTSAFLS 258
           A  + SSSSP+ ++      S+STS   R   ++S
Sbjct: 31  APAAYSSSSPSGSSPQHSSSSASTSPAARMYPYVS 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,000
Number of Sequences: 336
Number of extensions: 3181
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)