Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0788
         (619 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   3.4  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    24   3.4  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    24   3.4  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    24   4.5  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -3

Query: 353 SLSSSSPAHTTELSRQLSSSTSCRPRTSAFLSISKS 246
           SLS SS + +  LSR +S S S   R+ +  S S+S
Sbjct: 412 SLSKSSRSRSRSLSRSVSRSRSRGSRSRSRTSQSRS 447


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 352 HYHHRHQPTPLSSVVSFPHQ 293
           H+HH H PT  + +  + HQ
Sbjct: 506 HHHHHHHPT-AADLAGYHHQ 524


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
 Frame = -1

Query: 352 HYHHRHQPTP--LSSVVSFPHQPP 287
           H+HH+HQP         S PH  P
Sbjct: 311 HHHHQHQPQQQHQQQYHSHPHHTP 334


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +2

Query: 500 KYRDIYILKMPTKNEDMFITPLFTRGVN 583
           K R++YI  +PT++E +      + G+N
Sbjct: 126 KPRELYIPPLPTEDESLIFGSGISSGIN 153


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,942
Number of Sequences: 2352
Number of extensions: 10729
Number of successful extensions: 52
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)