Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0788
         (619 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   1.8  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   4.2  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   4.2  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   4.2  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   4.2  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   4.2  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   4.2  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    22   5.5  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          21   7.3  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   7.3  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   9.6  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    21   9.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   9.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.6  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 40  YPSCRFLQPGGS 5
           Y  C FL PGGS
Sbjct: 65  YAKCEFLNPGGS 76


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 42  LYSNSNSGKRYLWWDK 89
           +Y + N  +++LWW K
Sbjct: 71  MYKDKNVVQKFLWWYK 86


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 42  LYSNSNSGKRYLWWDK 89
           +Y + N  +++LWW K
Sbjct: 71  MYKDKNVVQKFLWWYK 86


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 325 VWAGDDDDNEVSA 363
           +WA D D+ E+SA
Sbjct: 38  IWADDSDEEELSA 50


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 358 TLHYHHRHQPTP 323
           T H+HH H  TP
Sbjct: 429 TPHHHHSHAATP 440



 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 373 LSYMLTLHYHHRHQPT 326
           +S +L L+YHHR+  T
Sbjct: 310 VSTILILNYHHRNADT 325


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 160 ITNKLVCCQLSTSHNENDIVLVRI 231
           +T ++  C L    NEND  L R+
Sbjct: 126 LTQRINSCDLLKKRNENDPFLKRL 149


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = +3

Query: 3   VDPPGCRNRHEGYLYSNSNSGKRYLWWDKPTS 98
           VDP GC      Y   + +  +    WD  TS
Sbjct: 402 VDPAGCNAGPAKYYLKSRDPERTPYQWDNSTS 433


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -1

Query: 130 FLKAM*VLGFLEVGLSHHKYRFPEFELEYKYPS 32
           F KA  V   +  G+SH KYR   F    K+PS
Sbjct: 319 FAKANAVYNPIVYGISHPKYRAALFA---KFPS 348


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 160 ITNKLVCCQLSTSHNENDIVLVR 228
           +T ++  C L    NEND  L R
Sbjct: 5   LTQRINSCDLLKKRNENDPFLKR 27


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 337 HQPTPLSSVVSFPHQPP 287
           H+   L +V  FP+QPP
Sbjct: 206 HRSGGLMNVERFPYQPP 222


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/31 (29%), Positives = 12/31 (38%)
 Frame = +3

Query: 6   DPPGCRNRHEGYLYSNSNSGKRYLWWDKPTS 98
           DP GC    E Y   + +  +    WD   S
Sbjct: 397 DPQGCGAGKENYQTMSRDPARTPFQWDDSVS 427


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/48 (20%), Positives = 21/48 (43%)
 Frame = +3

Query: 21  RNRHEGYLYSNSNSGKRYLWWDKPTSKKPKTYMAFRKRKIQGFHGWNN 164
           +N  E   Y  ++  +     ++  SK+PK   +   + I   + +NN
Sbjct: 273 KNEREYRKYGKTSKERSRDRMERERSKEPKIISSLSNKTIHNNNNYNN 320


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/31 (29%), Positives = 12/31 (38%)
 Frame = +3

Query: 6   DPPGCRNRHEGYLYSNSNSGKRYLWWDKPTS 98
           DP GC    E Y   + +  +    WD   S
Sbjct: 397 DPQGCGAGKENYQTMSRDPARTPFQWDDSVS 427


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 340 RHQPTPLSSVVSFPHQPPA 284
           R +   LSS  S PH+P A
Sbjct: 635 RERDASLSSTHSHPHEPGA 653


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,844
Number of Sequences: 438
Number of extensions: 3437
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)