Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0786
         (445 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    24   0.56 
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    24   0.56 
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    24   0.56 
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    24   0.56 
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   1.3  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   1.3  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   1.3  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   1.7  

>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +1

Query: 169 HQHH*TSIPLDFYSHSWN*IITTMSASQKESWAAAIDLLTNDECR 303
           H HH  +    F + +   ++ + S++   + AAA+D  T+  CR
Sbjct: 9   HHHH-QAAAAAFGAAASGSMVPSFSSTASSALAAAVDAATDKSCR 52


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +1

Query: 169 HQHH*TSIPLDFYSHSWN*IITTMSASQKESWAAAIDLLTNDECR 303
           H HH  +    F + +   ++ + S++   + AAA+D  T+  CR
Sbjct: 68  HHHH-QAAAAAFGAAASGSMVPSFSSTASSALAAAVDAATDKSCR 111


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +1

Query: 169 HQHH*TSIPLDFYSHSWN*IITTMSASQKESWAAAIDLLTNDECR 303
           H HH  +    F + +   ++ + S++   + AAA+D  T+  CR
Sbjct: 9   HHHH-QAAAAAFGAAASGSMVPSFSSTASSALAAAVDAATDKSCR 52


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +1

Query: 169 HQHH*TSIPLDFYSHSWN*IITTMSASQKESWAAAIDLLTNDECR 303
           H HH  +    F + +   ++ + S++   + AAA+D  T+  CR
Sbjct: 68  HHHH-QAAAAAFGAAASGSMVPSFSSTASSALAAAVDAATDKSCR 111


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +2

Query: 128 NGALTGQVSPSSQNTNITRHQSL 196
           NG     + P  Q T  TRHQ L
Sbjct: 224 NGTFAPGMEPKRQRTAYTRHQIL 246


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +2

Query: 128 NGALTGQVSPSSQNTNITRHQSL 196
           NG     + P  Q T  TRHQ L
Sbjct: 224 NGTFAPGMEPKRQRTAYTRHQIL 246


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +2

Query: 128 NGALTGQVSPSSQNTNITRHQSL 196
           NG     + P  Q T  TRHQ L
Sbjct: 224 NGTFAPGMEPKRQRTAYTRHQIL 246


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +1

Query: 226 IITTMSASQKESWAAAIDLLTNDECRLLLEVEDFFNDDCDLL 351
           IIT M+ +Q  +W A        E ++  E ++  +DD D L
Sbjct: 122 IITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDAL 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,501
Number of Sequences: 336
Number of extensions: 2039
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9985735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)